RNA–Protein interactions for RNA: ENST00000262965.9

TCF3-201, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-201ENST00000262965 CCDC51Q96ER9 411 aa15.05■□□□□ -0
TCF3-201ENST00000262965 TACO1Q9BSH4 297 aaKnown RBP15.05■□□□□ -0
TCF3-201ENST00000262965 ANKRD2Q9GZV1 360 aa15.05■□□□□ -0
TCF3-201ENST00000262965 STIM2Q9P246 746 aa15.05■□□□□ -0
TCF3-201ENST00000262965 SASH1O94885 1247 aa15.04■□□□□ -0
TCF3-201ENST00000262965 NECTIN1Q15223 517 aa15.04■□□□□ -0
TCF3-201ENST00000262965 ZNF365Q70YC5 407 aa15.04■□□□□ -0
TCF3-201ENST00000262965 FNBP4Q8N3X1 1017 aaPredicted RBP15.04■□□□□ -0
TCF3-201ENST00000262965 OGFOD1Q8N543 542 aa15.04■□□□□ -0
TCF3-201ENST00000262965 HAUS4Q9H6D7 363 aa15.04■□□□□ -0
TCF3-201ENST00000262965 FAM204AQ9H8W3 233 aa15.04■□□□□ -0
TCF3-201ENST00000262965 CCDC169A6NNP5 214 aa15.04■□□□□ -0
TCF3-201ENST00000262965 DDX39AO00148 427 aaKnown RBP15.04■□□□□ -0
TCF3-201ENST00000262965 CLNS1AP54105 237 aaKnown RBP15.04■□□□□ -0
TCF3-201ENST00000262965 KRT25Q7Z3Z0 450 aa15.04■□□□□ -0
TCF3-201ENST00000262965 SRGAP1Q7Z6B7 1085 aa15.04■□□□□ -0
TCF3-201ENST00000262965 ACRBPQ8NEB7 543 aa15.04■□□□□ -0
TCF3-201ENST00000262965 CCDC97Q96F63 343 aaPredicted RBP15.04■□□□□ -0
TCF3-201ENST00000262965 NYXQ9GZU5 481 aa15.04■□□□□ -0
TCF3-201ENST00000262965 DPH5Q9H2P9 285 aa15.04■□□□□ -0
TCF3-201ENST00000262965 FAN1Q9Y2M0 1017 aa15.04■□□□□ -0
TCF3-201ENST00000262965 SMCO2A6NFE2 343 aa15.04■□□□□ -0
TCF3-201ENST00000262965 VPS41P49754 854 aa15.04■□□□□ -0
TCF3-201ENST00000262965 RBM26Q5T8P6 1007 aaKnown RBP15.04■□□□□ -0
TCF3-201ENST00000262965 NAA35Q5VZE5 725 aa15.04■□□□□ -0
TCF3-201ENST00000262965 SLAIN2Q9P270 581 aa15.04■□□□□ -0
TCF3-201ENST00000262965 MYO1AQ9UBC5 1043 aa15.04■□□□□ -0
TCF3-201ENST00000262965 CEP83Q9Y592 693 aa15.04■□□□□ -0
TCF3-201ENST00000262965 A0A1B0GUA9 196 aa15.04■□□□□ -0
TCF3-201ENST00000262965 FLOT1O75955 427 aa15.04■□□□□ -0
TCF3-201ENST00000262965 CTNNA1P35221 906 aaKnown RBP15.04■□□□□ -0
TCF3-201ENST00000262965 NCBP1Q09161 790 aaKnown RBP15.04■□□□□ -0
TCF3-201ENST00000262965 USH1GQ495M9 461 aa15.04■□□□□ -0
TCF3-201ENST00000262965 ZMYM1Q5SVZ6 1142 aa15.04■□□□□ -0
TCF3-201ENST00000262965 CCDC105Q8IYK2 499 aa15.04■□□□□ -0
TCF3-201ENST00000262965 TRIM58Q8NG06 486 aa15.04■□□□□ -0
TCF3-201ENST00000262965 RASGRP4Q8TDF6 673 aa15.04■□□□□ -0
TCF3-201ENST00000262965 NPHP4O75161 1426 aaPredicted RBP15.03■□□□□ -0
TCF3-201ENST00000262965 PCK1P35558 622 aa15.03■□□□□ -0
TCF3-201ENST00000262965 DNM2P50570 870 aa15.03■□□□□ -0
TCF3-201ENST00000262965 TRAF1Q13077 416 aa15.03■□□□□ -0
TCF3-201ENST00000262965 RESTQ13127 1097 aa15.03■□□□□ -0
TCF3-201ENST00000262965 NAP1L3Q99457 506 aaPredicted RBP15.03■□□□□ -0
TCF3-201ENST00000262965 ATP7BP35670 1465 aa15.03■□□□□ -0
TCF3-201ENST00000262965 GCNT3O95395 438 aa15.03■□□□□ -0
TCF3-201ENST00000262965 HMGB2P26583 209 aaKnown RBP15.03■□□□□ -0
TCF3-201ENST00000262965 KIF23Q02241 960 aaPredicted RBP15.03■□□□□ -0
TCF3-201ENST00000262965 PPP2R5BQ15173 497 aa15.03■□□□□ -0
TCF3-201ENST00000262965 ANKRD42Q8N9B4 389 aa15.03■□□□□ -0
TCF3-201ENST00000262965 SOWAHDA6NJG2 315 aa15.03■□□□□ -0
TCF3-201ENST00000262965 EXOC3O60645 756 aa15.03■□□□□ -0
TCF3-201ENST00000262965 ECM2O94769 699 aaPredicted RBP15.03■□□□□ -0
TCF3-201ENST00000262965 BLIDQ8IZY5 108 aa15.03■□□□□ -0
TCF3-201ENST00000262965 OSBP2Q969R2 916 aa15.03■□□□□ -0
TCF3-201ENST00000262965 LSM14BQ9BX40 385 aaKnown RBP15.03■□□□□ -0
TCF3-201ENST00000262965 LMTK3Q96Q04 1460 aa15.03■□□□□ -0
TCF3-201ENST00000262965 BUB1BO60566 1050 aaPredicted RBP15.02■□□□□ -0
TCF3-201ENST00000262965 ARHGAP25P42331 645 aa15.02■□□□□ -0
TCF3-201ENST00000262965 ADCY7P51828 1080 aa15.02■□□□□ -0
TCF3-201ENST00000262965 COPB1P53618 953 aaKnown RBP15.02■□□□□ -0
TCF3-201ENST00000262965 RBL2Q08999 1139 aa15.02■□□□□ -0
TCF3-201ENST00000262965 HAUS3Q68CZ6 603 aa15.02■□□□□ -0
TCF3-201ENST00000262965 PARD6BQ9BYG5 372 aa15.02■□□□□ -0
TCF3-201ENST00000262965 GREM2Q9H772 168 aa15.02■□□□□ -0
TCF3-201ENST00000262965 SPTLC3Q9NUV7 552 aa15.02■□□□□ -0
TCF3-201ENST00000262965 POLR3EQ9NVU0 708 aa15.02■□□□□ -0
TCF3-201ENST00000262965 USTQ9Y2C2 406 aa15.02■□□□□ -0
TCF3-201ENST00000262965 SLC1A4P43007 532 aa15.02■□□□□ -0
TCF3-201ENST00000262965 U2AF1L4Q8WU68 220 aaKnown RBP15.02■□□□□ -0
TCF3-201ENST00000262965 TSNARE1Q96NA8 513 aa15.02■□□□□ -0
TCF3-201ENST00000262965 C8orf37Q96NL8 207 aa15.02■□□□□ -0
TCF3-201ENST00000262965 CXCR5P32302 372 aa15.02□□□□□ -0.01
TCF3-201ENST00000262965 TRIML1Q8N9V2 468 aa15.02□□□□□ -0.01
TCF3-201ENST00000262965 CAPS2Q9BXY5 557 aa15.02□□□□□ -0.01
TCF3-201ENST00000262965 PHKG2P15735 406 aa15.02□□□□□ -0.01
TCF3-201ENST00000262965 ALDH3A1P30838 453 aa15.02□□□□□ -0.01
TCF3-201ENST00000262965 ARL1P40616 181 aaPredicted RBP15.02□□□□□ -0.01
TCF3-201ENST00000262965 MRPS25P82663 173 aaKnown RBP15.02□□□□□ -0.01
TCF3-201ENST00000262965 GUCY2DQ02846 1103 aa15.02□□□□□ -0.01
TCF3-201ENST00000262965 TCP10Q12799 353 aa15.02□□□□□ -0.01
TCF3-201ENST00000262965 PARP10Q53GL7 1025 aa15.02□□□□□ -0.01
TCF3-201ENST00000262965 MYCT1Q8N699 235 aa15.02□□□□□ -0.01
TCF3-201ENST00000262965 PNMA1Q8ND90 353 aa15.02□□□□□ -0.01
TCF3-201ENST00000262965 ZSCAN10Q96SZ4 725 aaPredicted RBP15.02□□□□□ -0.01
TCF3-201ENST00000262965 HYOU1Q9Y4L1 999 aa15.02□□□□□ -0.01
TCF3-201ENST00000262965 LMTK2Q8IWU2 1503 aa15.01□□□□□ -0.01
TCF3-201ENST00000262965 B4DLN1 442 aa15.01□□□□□ -0.01
TCF3-201ENST00000262965 RPN1P04843 607 aaKnown RBP15.01□□□□□ -0.01
TCF3-201ENST00000262965 CTSWP56202 376 aa15.01□□□□□ -0.01
TCF3-201ENST00000262965 EHHADHQ08426 723 aa15.01□□□□□ -0.01
TCF3-201ENST00000262965 PGBD1Q96JS3 809 aa15.01□□□□□ -0.01
TCF3-201ENST00000262965 PDLIM2Q96JY6 352 aa15.01□□□□□ -0.01
TCF3-201ENST00000262965 RPGRIP1Q96KN7 1286 aa15.01□□□□□ -0.01
TCF3-201ENST00000262965 KIF2CQ99661 725 aa15.01□□□□□ -0.01
TCF3-201ENST00000262965 MRPL44Q9H9J2 332 aaKnown RBP15.01□□□□□ -0.01
TCF3-201ENST00000262965 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.01□□□□□ -0.011e-8■■■■■ 60.5
TCF3-201ENST00000262965 PRR36Q9H6K5 1346 aa15.01□□□□□ -0.01
TCF3-201ENST00000262965 H7C1D1 291 aa15.01□□□□□ -0.01
TCF3-201ENST00000262965 M0R2C6 588 aa15.01□□□□□ -0.01
TCF3-201ENST00000262965 POLR2FP61218 127 aaKnown RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 255.7 ms