RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 N4BP2L2Q92802 583 aaPredicted RBP17.53■□□□□ 0.4
SHANK3-201ENST00000262795 PLCD1P51178 756 aa17.53■□□□□ 0.4
SHANK3-201ENST00000262795 FBXW4P57775 412 aa17.53■□□□□ 0.4
SHANK3-201ENST00000262795 DMP1Q13316 513 aaPredicted RBP17.53■□□□□ 0.4
SHANK3-201ENST00000262795 GDAP1Q8TB36 358 aa17.53■□□□□ 0.4
SHANK3-201ENST00000262795 SEPT6Q14141 434 aa17.53■□□□□ 0.4
SHANK3-201ENST00000262795 MCM6Q14566 821 aa17.53■□□□□ 0.4
SHANK3-201ENST00000262795 C7orf31Q8N865 590 aa17.53■□□□□ 0.4
SHANK3-201ENST00000262795 NUCKS1Q9H1E3 243 aaKnown RBP17.53■□□□□ 0.4
SHANK3-201ENST00000262795 UPP2O95045 317 aa17.53■□□□□ 0.4
SHANK3-201ENST00000262795 SYT1P21579 422 aa17.53■□□□□ 0.4
SHANK3-201ENST00000262795 NUCB1Q02818 461 aa17.53■□□□□ 0.4
SHANK3-201ENST00000262795 FMNL3Q8IVF7 1028 aa17.53■□□□□ 0.4
SHANK3-201ENST00000262795 CEP85Q6P2H3 762 aa17.53■□□□□ 0.4
SHANK3-201ENST00000262795 ELMSAN1Q6PJG2 1045 aa17.53■□□□□ 0.4
SHANK3-201ENST00000262795 CCDC127Q96BQ5 260 aa17.53■□□□□ 0.4
SHANK3-201ENST00000262795 TACC3Q9Y6A5 838 aa17.53■□□□□ 0.4
SHANK3-201ENST00000262795 DUOX2Q9NRD8 1548 aa17.52■□□□□ 0.4
SHANK3-201ENST00000262795 OTUD5Q96G74 571 aa17.52■□□□□ 0.4
SHANK3-201ENST00000262795 TEKT3Q9BXF9 490 aa17.52■□□□□ 0.4
SHANK3-201ENST00000262795 SPON1Q9HCB6 807 aa17.52■□□□□ 0.4
SHANK3-201ENST00000262795 FAM184BQ9ULE4 1060 aa17.52■□□□□ 0.4
SHANK3-201ENST00000262795 DPF3Q92784 378 aa17.52■□□□□ 0.4
SHANK3-201ENST00000262795 KIAA0232Q92628 1395 aa17.52■□□□□ 0.4
SHANK3-201ENST00000262795 PCDHA1Q9Y5I3 950 aa17.52■□□□□ 0.4
SHANK3-201ENST00000262795 MYBP10242 640 aa17.52■□□□□ 0.39
SHANK3-201ENST00000262795 ZNF157P51786 506 aaPredicted RBP17.52■□□□□ 0.39
SHANK3-201ENST00000262795 GPBP1Q86WP2 473 aa17.52■□□□□ 0.39
SHANK3-201ENST00000262795 CTTNBP2NLQ9P2B4 639 aa17.52■□□□□ 0.39
SHANK3-201ENST00000262795 YEATS2Q9ULM3 1422 aa17.52■□□□□ 0.39
SHANK3-201ENST00000262795 STAM2O75886 525 aa17.51■□□□□ 0.39
SHANK3-201ENST00000262795 SRGAP2CP0DJJ0 459 aa17.51■□□□□ 0.39
SHANK3-201ENST00000262795 TTC31Q49AM3 519 aaPredicted RBP17.51■□□□□ 0.39
SHANK3-201ENST00000262795 APPBP2Q92624 585 aa17.51■□□□□ 0.39
SHANK3-201ENST00000262795 SNX25Q9H3E2 840 aa17.51■□□□□ 0.39
SHANK3-201ENST00000262795 REXO1Q8N1G1 1221 aaKnown RBP17.51■□□□□ 0.39
SHANK3-201ENST00000262795 ZNF341Q9BYN7 854 aa17.51■□□□□ 0.39
SHANK3-201ENST00000262795 SASH1O94885 1247 aa17.51■□□□□ 0.39
SHANK3-201ENST00000262795 PGBD1Q96JS3 809 aa17.51■□□□□ 0.39
SHANK3-201ENST00000262795 NCAPGQ9BPX3 1015 aa17.51■□□□□ 0.39
SHANK3-201ENST00000262795 DENND3A2RUS2 1198 aa17.51■□□□□ 0.39
SHANK3-201ENST00000262795 NAA25Q14CX7 972 aa17.51■□□□□ 0.39
SHANK3-201ENST00000262795 FASTKD5Q7L8L6 764 aaKnown RBP17.51■□□□□ 0.39
SHANK3-201ENST00000262795 EDC3Q96F86 508 aaKnown RBP17.51■□□□□ 0.39
SHANK3-201ENST00000262795 VPS18Q9P253 973 aa17.51■□□□□ 0.39
SHANK3-201ENST00000262795 ERVV-2B6SEH9 535 aa17.51■□□□□ 0.39
SHANK3-201ENST00000262795 KRT26Q7Z3Y9 468 aa17.51■□□□□ 0.39
SHANK3-201ENST00000262795 PGBD3Q8N328 593 aa17.51■□□□□ 0.39
SHANK3-201ENST00000262795 ANKRD44Q8N8A2 993 aa17.51■□□□□ 0.39
SHANK3-201ENST00000262795 CETN3O15182 167 aa17.51■□□□□ 0.39
SHANK3-201ENST00000262795 KAZNQ674X7 775 aa17.51■□□□□ 0.39
SHANK3-201ENST00000262795 KRBA2Q6ZNG9 492 aa17.51■□□□□ 0.39
SHANK3-201ENST00000262795 USP17L3A6NCW0 530 aa17.5■□□□□ 0.39
SHANK3-201ENST00000262795 USP17L4A6NCW7 530 aa17.5■□□□□ 0.39
SHANK3-201ENST00000262795 CCND2P30279 289 aa17.5■□□□□ 0.39
SHANK3-201ENST00000262795 FAM160A1Q05DH4 1040 aa17.5■□□□□ 0.39
SHANK3-201ENST00000262795 USP17L1Q7RTZ2 530 aa17.5■□□□□ 0.39
SHANK3-201ENST00000262795 GREM2Q9H772 168 aa17.5■□□□□ 0.39
SHANK3-201ENST00000262795 ANXA13P27216 316 aa17.5■□□□□ 0.39
SHANK3-201ENST00000262795 ATICP31939 592 aa17.5■□□□□ 0.39
SHANK3-201ENST00000262795 TNNC1P63316 161 aa17.5■□□□□ 0.39
SHANK3-201ENST00000262795 MYLK4Q86YV6 388 aaPredicted RBP17.5■□□□□ 0.39
SHANK3-201ENST00000262795 PSMB7Q99436 277 aa17.5■□□□□ 0.39
SHANK3-201ENST00000262795 CALCOCO2Q13137 446 aa17.5■□□□□ 0.39
SHANK3-201ENST00000262795 DDX25Q9UHL0 483 aaKnown RBP17.5■□□□□ 0.39
SHANK3-201ENST00000262795 PRIMPOLQ96LW4 560 aa17.5■□□□□ 0.39
SHANK3-201ENST00000262795 SEC31BQ9NQW1 1179 aa17.5■□□□□ 0.39
SHANK3-201ENST00000262795 CLUL1Q15846 466 aa17.5■□□□□ 0.39
SHANK3-201ENST00000262795 XDHP47989 1333 aa17.5■□□□□ 0.39
SHANK3-201ENST00000262795 ATP10BO94823 1461 aa17.5■□□□□ 0.39
SHANK3-201ENST00000262795 NLRP4Q96MN2 994 aa17.5■□□□□ 0.39
SHANK3-201ENST00000262795 ARPP21Q9UBL0 812 aaPredicted RBP17.5■□□□□ 0.39
SHANK3-201ENST00000262795 DNAI1Q9UI46 699 aa17.5■□□□□ 0.39
SHANK3-201ENST00000262795 MIS18BP1Q6P0N0 1132 aa17.49■□□□□ 0.39
SHANK3-201ENST00000262795 WDR46O15213 610 aaKnown RBP17.49■□□□□ 0.39
SHANK3-201ENST00000262795 LTKP29376 864 aa17.49■□□□□ 0.39
SHANK3-201ENST00000262795 SCYL1Q96KG9 808 aa17.49■□□□□ 0.39
SHANK3-201ENST00000262795 HESX1Q9UBX0 185 aa17.49■□□□□ 0.39
SHANK3-201ENST00000262795 MKRN1Q9UHC7 482 aaKnown RBP17.49■□□□□ 0.39
SHANK3-201ENST00000262795 CTAGE9A4FU28 777 aa17.49■□□□□ 0.39
SHANK3-201ENST00000262795 CAPN12Q6ZSI9 719 aa17.49■□□□□ 0.39
SHANK3-201ENST00000262795 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.49■□□□□ 0.39
SHANK3-201ENST00000262795 USP19O94966 1318 aa17.49■□□□□ 0.39
SHANK3-201ENST00000262795 TTC41PQ6P2S7 1318 aa17.49■□□□□ 0.39
SHANK3-201ENST00000262795 PHKG2P15735 406 aa17.49■□□□□ 0.39
SHANK3-201ENST00000262795 USP14P54578 494 aa17.49■□□□□ 0.39
SHANK3-201ENST00000262795 TBC1D8BQ0IIM8 1120 aa17.49■□□□□ 0.39
SHANK3-201ENST00000262795 ZNF365Q70YC5 407 aa17.49■□□□□ 0.39
SHANK3-201ENST00000262795 CSGALNACT2Q8N6G5 542 aa17.49■□□□□ 0.39
SHANK3-201ENST00000262795 GABPB2Q8TAK5 448 aaPredicted RBP17.49■□□□□ 0.39
SHANK3-201ENST00000262795 ZNF668Q96K58 619 aaPredicted RBP17.49■□□□□ 0.39
SHANK3-201ENST00000262795 RHOXF2BP0C7M4 288 aa17.49■□□□□ 0.39
SHANK3-201ENST00000262795 MTERF2Q49AM1 385 aa17.49■□□□□ 0.39
SHANK3-201ENST00000262795 YAF2Q8IY57 180 aa17.49■□□□□ 0.39
SHANK3-201ENST00000262795 RHOXF2Q9BQY4 288 aa17.49■□□□□ 0.39
SHANK3-201ENST00000262795 MAP10Q9P2G4 905 aa17.49■□□□□ 0.39
SHANK3-201ENST00000262795 ATP10AO60312 1499 aa17.49■□□□□ 0.39
SHANK3-201ENST00000262795 KRT25Q7Z3Z0 450 aa17.48■□□□□ 0.39
SHANK3-201ENST00000262795 CERS3Q8IU89 383 aa17.48■□□□□ 0.39
SHANK3-201ENST00000262795 U2AF2P26368 475 aaKnown RBP eCLIP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms