RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 USP17L12C9JPN9 530 aa21.43■■□□□ 1.02
SNX4-201ENST00000251775 USP17L21D6R901 530 aa21.43■■□□□ 1.02
SNX4-201ENST00000251775 TEX33O43247 280 aa21.43■■□□□ 1.02
SNX4-201ENST00000251775 RPS6KA5O75582 802 aa21.43■■□□□ 1.02
SNX4-201ENST00000251775 PLEKHA8P1O95397 391 aa21.43■■□□□ 1.02
SNX4-201ENST00000251775 NOP2P46087 812 aaKnown RBP21.43■■□□□ 1.02
SNX4-201ENST00000251775 RPS8P62241 208 aaKnown RBP21.43■■□□□ 1.02
SNX4-201ENST00000251775 PPP2R5BQ15173 497 aa21.43■■□□□ 1.02
SNX4-201ENST00000251775 IFIT1BQ5T764 474 aaKnown RBP21.43■■□□□ 1.02
SNX4-201ENST00000251775 CCDC24Q8N4L8 307 aa21.43■■□□□ 1.02
SNX4-201ENST00000251775 ZFP91Q96JP5 570 aaPredicted RBP21.43■■□□□ 1.02
SNX4-201ENST00000251775 TFCP2L1Q9NZI6 479 aa21.43■■□□□ 1.02
SNX4-201ENST00000251775 SERTAD1Q9UHV2 236 aa21.43■■□□□ 1.02
SNX4-201ENST00000251775 POLR2DO15514 142 aaKnown RBP21.42■■□□□ 1.02
SNX4-201ENST00000251775 ERLIN1O75477 346 aa21.42■■□□□ 1.02
SNX4-201ENST00000251775 MECOMQ03112 1051 aa21.42■■□□□ 1.02
SNX4-201ENST00000251775 WWC2Q6AWC2 1192 aa21.42■■□□□ 1.02
SNX4-201ENST00000251775 APTXQ7Z2E3 356 aaKnown RBP21.42■■□□□ 1.02
SNX4-201ENST00000251775 EIF3JO75822 258 aaKnown RBP21.42■■□□□ 1.02
SNX4-201ENST00000251775 TFRCP02786 760 aaKnown RBP21.42■■□□□ 1.02
SNX4-201ENST00000251775 RBL2Q08999 1139 aa21.42■■□□□ 1.02
SNX4-201ENST00000251775 ZNF569Q5MCW4 686 aa21.42■■□□□ 1.02
SNX4-201ENST00000251775 FOXR1Q6PIV2 292 aa21.42■■□□□ 1.02
SNX4-201ENST00000251775 GRAMD1CQ8IYS0 662 aa21.42■■□□□ 1.02
SNX4-201ENST00000251775 SRPRBQ9Y5M8 271 aaKnown RBP21.42■■□□□ 1.02
SNX4-201ENST00000251775 AKAP17AQ02040 695 aaKnown RBP21.41■■□□□ 1.02
SNX4-201ENST00000251775 EARS2Q5JPH6 523 aaKnown RBP21.41■■□□□ 1.02
SNX4-201ENST00000251775 USP49Q70CQ1 688 aa21.41■■□□□ 1.02
SNX4-201ENST00000251775 ZNF579Q8NAF0 562 aaKnown RBP21.41■■□□□ 1.02
SNX4-201ENST00000251775 SEMA3EO15041 775 aa21.4■■□□□ 1.02
SNX4-201ENST00000251775 TROAPQ12815 778 aa21.4■■□□□ 1.02
SNX4-201ENST00000251775 CATIPQ7Z7H3 387 aa21.4■■□□□ 1.02
SNX4-201ENST00000251775 TRIML1Q8N9V2 468 aa21.4■■□□□ 1.02
SNX4-201ENST00000251775 PHF20Q9BVI0 1012 aa21.4■■□□□ 1.02
SNX4-201ENST00000251775 NAA15Q9BXJ9 866 aaKnown RBP21.4■■□□□ 1.02
SNX4-201ENST00000251775 NARFQ9UHQ1 456 aa21.4■■□□□ 1.02
SNX4-201ENST00000251775 V9GY48 417 aaPredicted RBP21.4■■□□□ 1.02
SNX4-201ENST00000251775 PRPF3O43395 683 aaKnown RBP21.4■■□□□ 1.02
SNX4-201ENST00000251775 PLCD1P51178 756 aa21.4■■□□□ 1.02
SNX4-201ENST00000251775 VSNL1P62760 191 aa21.4■■□□□ 1.02
SNX4-201ENST00000251775 RASGRP2Q7LDG7 609 aa21.4■■□□□ 1.02
SNX4-201ENST00000251775 IQCA1Q86XH1 822 aa21.4■■□□□ 1.02
SNX4-201ENST00000251775 NLRP3Q96P20 1036 aa21.4■■□□□ 1.02
SNX4-201ENST00000251775 AATFQ9NY61 560 aaKnown RBP eCLIP21.4■■□□□ 1.02
SNX4-201ENST00000251775 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.4■■□□□ 1.02
SNX4-201ENST00000251775 KIF4BQ2VIQ3 1234 aa21.39■■□□□ 1.02
SNX4-201ENST00000251775 IGSF22Q8N9C0 903 aa21.39■■□□□ 1.02
SNX4-201ENST00000251775 CSRNP2Q9H175 543 aa21.39■■□□□ 1.02
SNX4-201ENST00000251775 COL24A1Q17RW2 1714 aa21.39■■□□□ 1.02
SNX4-201ENST00000251775 RHOXF2BP0C7M4 288 aa21.39■■□□□ 1.01
SNX4-201ENST00000251775 PRDX5P30044 214 aa21.39■■□□□ 1.01
SNX4-201ENST00000251775 HIBADHP31937 336 aaKnown RBP21.39■■□□□ 1.01
SNX4-201ENST00000251775 TUBB2AQ13885 445 aa21.39■■□□□ 1.01
SNX4-201ENST00000251775 CASP8Q14790 479 aa21.39■■□□□ 1.01
SNX4-201ENST00000251775 SETDB2Q96T68 719 aa21.39■■□□□ 1.01
SNX4-201ENST00000251775 RHOXF2Q9BQY4 288 aa21.39■■□□□ 1.01
SNX4-201ENST00000251775 TUBB2BQ9BVA1 445 aa21.39■■□□□ 1.01
SNX4-201ENST00000251775 CEP131Q9UPN4 1083 aa21.39■■□□□ 1.01
SNX4-201ENST00000251775 LAMB1P07942 1786 aa21.39■■□□□ 1.01
SNX4-201ENST00000251775 CTAGE9A4FU28 777 aa21.38■■□□□ 1.01
SNX4-201ENST00000251775 RGL2O15211 777 aa21.38■■□□□ 1.01
SNX4-201ENST00000251775 PCP11498 1178 aaKnown RBP21.38■■□□□ 1.01
SNX4-201ENST00000251775 PBX1P40424 430 aa21.38■■□□□ 1.01
SNX4-201ENST00000251775 NBPF5PQ86XG9 351 aaPredicted RBP21.38■■□□□ 1.01
SNX4-201ENST00000251775 SLC35F6Q8N357 371 aa21.38■■□□□ 1.01
SNX4-201ENST00000251775 CPLX3Q8WVH0 158 aa21.38■■□□□ 1.01
SNX4-201ENST00000251775 NYXQ9GZU5 481 aa21.38■■□□□ 1.01
SNX4-201ENST00000251775 DCP1AQ9NPI6 582 aaPredicted RBP21.38■■□□□ 1.01
SNX4-201ENST00000251775 BAZ2BQ9UIF8 2168 aaKnown RBP21.38■■□□□ 1.01
SNX4-201ENST00000251775 CCDC88AQ3V6T2 1871 aa21.38■■□□□ 1.01
SNX4-201ENST00000251775 NMT2O60551 498 aa21.38■■□□□ 1.01
SNX4-201ENST00000251775 RPS6KA4O75676 772 aa21.38■■□□□ 1.01
SNX4-201ENST00000251775 XBP1P17861 261 aa21.38■■□□□ 1.01
SNX4-201ENST00000251775 ERCC5P28715 1186 aaPredicted RBP21.38■■□□□ 1.01
SNX4-201ENST00000251775 TUBB4BP68371 445 aa21.38■■□□□ 1.01
SNX4-201ENST00000251775 PPFIBP1Q86W92 1011 aa21.38■■□□□ 1.01
SNX4-201ENST00000251775 ACTN4O43707 911 aaKnown RBP21.37■■□□□ 1.01
SNX4-201ENST00000251775 KRT2P35908 639 aa21.37■■□□□ 1.01
SNX4-201ENST00000251775 TXNRD3Q86VQ6 643 aa21.37■■□□□ 1.01
SNX4-201ENST00000251775 SPATA20Q8TB22 786 aa21.37■■□□□ 1.01
SNX4-201ENST00000251775 RBM28Q9NW13 759 aaKnown RBP21.37■■□□□ 1.01
SNX4-201ENST00000251775 WNT7AO00755 349 aa21.37■■□□□ 1.01
SNX4-201ENST00000251775 MFAP3LO75121 409 aa21.37■■□□□ 1.01
SNX4-201ENST00000251775 CYP2D6P10635 497 aa21.37■■□□□ 1.01
SNX4-201ENST00000251775 PIP4K2BP78356 416 aa21.37■■□□□ 1.01
SNX4-201ENST00000251775 JAG2Q9Y219 1238 aa21.37■■□□□ 1.01
SNX4-201ENST00000251775 PDS5AQ29RF7 1337 aaKnown RBP21.36■■□□□ 1.01
SNX4-201ENST00000251775 TRIM75PA6NK02 468 aa21.36■■□□□ 1.01
SNX4-201ENST00000251775 NOM1Q5C9Z4 860 aaKnown RBP21.36■■□□□ 1.01
SNX4-201ENST00000251775 FAM47AQ5JRC9 791 aa21.36■■□□□ 1.01
SNX4-201ENST00000251775 FAM71BQ8TC56 605 aa21.36■■□□□ 1.01
SNX4-201ENST00000251775 ADD3Q9UEY8 706 aaKnown RBP21.36■■□□□ 1.01
SNX4-201ENST00000251775 KIAA1551Q9HCM1 1747 aa21.36■■□□□ 1.01
SNX4-201ENST00000251775 ORC4O43929 436 aa21.36■■□□□ 1.01
SNX4-201ENST00000251775 DDAH1O94760 285 aa21.36■■□□□ 1.01
SNX4-201ENST00000251775 ABL1P00519 1130 aa21.36■■□□□ 1.01
SNX4-201ENST00000251775 CALM1P0DP23 149 aa21.36■■□□□ 1.01
SNX4-201ENST00000251775 CALM2P0DP24 149 aa21.36■■□□□ 1.01
SNX4-201ENST00000251775 CALM3P0DP25 149 aa21.36■■□□□ 1.01
SNX4-201ENST00000251775 RC3H1Q5TC82 1133 aaKnown RBP21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms