RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 KCNG1Q9UIX4 513 aa19.3■□□□□ 0.68
FOXA1-201ENST00000250448 FOXN1O15353 648 aa19.3■□□□□ 0.68
FOXA1-201ENST00000250448 CASQ1P31415 396 aa19.3■□□□□ 0.68
FOXA1-201ENST00000250448 KRI1Q8N9T8 703 aaKnown RBP19.3■□□□□ 0.68
FOXA1-201ENST00000250448 DYNLL2Q96FJ2 89 aa19.3■□□□□ 0.68
FOXA1-201ENST00000250448 TMEM87BQ96K49 555 aa19.3■□□□□ 0.68
FOXA1-201ENST00000250448 CNNM2Q9H8M5 875 aa19.3■□□□□ 0.68
FOXA1-201ENST00000250448 FAM205AQ6ZU69 1335 aa19.3■□□□□ 0.68
FOXA1-201ENST00000250448 SEC31AO94979 1220 aaKnown RBP19.3■□□□□ 0.68
FOXA1-201ENST00000250448 ELOA2Q8IYF1 753 aaPredicted RBP19.3■□□□□ 0.68
FOXA1-201ENST00000250448 CALCOCO1Q9P1Z2 691 aa19.3■□□□□ 0.68
FOXA1-201ENST00000250448 HOOK1Q9UJC3 728 aaKnown RBP19.3■□□□□ 0.68
FOXA1-201ENST00000250448 MAN1B1Q9UKM7 699 aa19.3■□□□□ 0.68
FOXA1-201ENST00000250448 ATP8B1O43520 1251 aa19.29■□□□□ 0.68
FOXA1-201ENST00000250448 GNG11P61952 73 aa19.29■□□□□ 0.68
FOXA1-201ENST00000250448 PDILTQ8N807 584 aa19.29■□□□□ 0.68
FOXA1-201ENST00000250448 WDR24Q96S15 920 aa19.29■□□□□ 0.68
FOXA1-201ENST00000250448 EYA3Q99504 573 aa19.29■□□□□ 0.68
FOXA1-201ENST00000250448 ATP8A2Q9NTI2 1148 aa19.29■□□□□ 0.68
FOXA1-201ENST00000250448 TTF2Q9UNY4 1162 aaKnown RBP19.29■□□□□ 0.68
FOXA1-201ENST00000250448 C10orf71Q711Q0 1435 aa19.29■□□□□ 0.68
FOXA1-201ENST00000250448 TIAM2Q8IVF5 1701 aa19.29■□□□□ 0.68
FOXA1-201ENST00000250448 BAG3O95817 575 aa19.29■□□□□ 0.68
FOXA1-201ENST00000250448 MDM2Q00987 491 aaPredicted RBP19.29■□□□□ 0.68
FOXA1-201ENST00000250448 HSP90AA4PQ58FG1 418 aa19.29■□□□□ 0.68
FOXA1-201ENST00000250448 FAM47AQ5JRC9 791 aa19.29■□□□□ 0.68
FOXA1-201ENST00000250448 TBC1D22AQ8WUA7 517 aa19.29■□□□□ 0.68
FOXA1-201ENST00000250448 STK36Q9NRP7 1315 aa19.28■□□□□ 0.68
FOXA1-201ENST00000250448 STX10O60499 249 aa19.28■□□□□ 0.68
FOXA1-201ENST00000250448 LDHCP07864 332 aa19.28■□□□□ 0.68
FOXA1-201ENST00000250448 KCNA3P22001 575 aa19.28■□□□□ 0.68
FOXA1-201ENST00000250448 MAP3K9P80192 1104 aa19.28■□□□□ 0.68
FOXA1-201ENST00000250448 FAM217BQ9NTX9 383 aaPredicted RBP19.28■□□□□ 0.68
FOXA1-201ENST00000250448 ANAPC4Q9UJX5 808 aa19.28■□□□□ 0.68
FOXA1-201ENST00000250448 PCDHAC2Q9Y5I4 1007 aa19.28■□□□□ 0.68
FOXA1-201ENST00000250448 ECE2O60344 883 aa19.28■□□□□ 0.68
FOXA1-201ENST00000250448 NMT2O60551 498 aa19.28■□□□□ 0.68
FOXA1-201ENST00000250448 TOGARAM2Q6ZUX3 1019 aa19.28■□□□□ 0.68
FOXA1-201ENST00000250448 TC2NQ8N9U0 490 aa19.28■□□□□ 0.68
FOXA1-201ENST00000250448 CNKSR2Q8WXI2 1034 aa19.28■□□□□ 0.68
FOXA1-201ENST00000250448 RNF41Q9H4P4 317 aaPredicted RBP19.28■□□□□ 0.68
FOXA1-201ENST00000250448 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.28■□□□□ 0.68
FOXA1-201ENST00000250448 DAGLAQ9Y4D2 1042 aa19.28■□□□□ 0.68
FOXA1-201ENST00000250448 MRFAP1Q9Y605 127 aa19.28■□□□□ 0.68
FOXA1-201ENST00000250448 ZBTB22O15209 634 aa19.27■□□□□ 0.68
FOXA1-201ENST00000250448 ZNF18P17022 549 aa19.27■□□□□ 0.68
FOXA1-201ENST00000250448 PPP2R3AQ06190 1150 aa19.27■□□□□ 0.68
FOXA1-201ENST00000250448 POSTNQ15063 836 aa19.27■□□□□ 0.68
FOXA1-201ENST00000250448 SPECC1LQ69YQ0 1117 aa19.27■□□□□ 0.68
FOXA1-201ENST00000250448 SGMS1Q86VZ5 419 aa19.27■□□□□ 0.68
FOXA1-201ENST00000250448 TEX11Q8IYF3 940 aa19.27■□□□□ 0.68
FOXA1-201ENST00000250448 SLC26A6Q9BXS9 759 aa19.27■□□□□ 0.68
FOXA1-201ENST00000250448 BCCIPQ9P287 314 aaKnown RBP eCLIP19.27■□□□□ 0.68
FOXA1-201ENST00000250448 NFE2L3Q9Y4A8 694 aa19.27■□□□□ 0.68
FOXA1-201ENST00000250448 SCN9AQ15858 1988 aa19.27■□□□□ 0.68
FOXA1-201ENST00000250448 FMR1Q06787 632 aaKnown RBP eCLIP19.27■□□□□ 0.68
FOXA1-201ENST00000250448 SPECC1Q5M775 1068 aa19.27■□□□□ 0.68
FOXA1-201ENST00000250448 KIAA0825Q8IV33 1275 aa19.27■□□□□ 0.68
FOXA1-201ENST00000250448 NOSTRINQ8IVI9 506 aa19.27■□□□□ 0.68
FOXA1-201ENST00000250448 GPR161Q8N6U8 529 aaKnown RBP19.27■□□□□ 0.68
FOXA1-201ENST00000250448 TTLL6Q8N841 843 aa19.27■□□□□ 0.68
FOXA1-201ENST00000250448 SLC44A5Q8NCS7 719 aa19.27■□□□□ 0.68
FOXA1-201ENST00000250448 EPC1Q9H2F5 836 aa19.27■□□□□ 0.68
FOXA1-201ENST00000250448 MKRN1Q9UHC7 482 aaKnown RBP19.27■□□□□ 0.68
FOXA1-201ENST00000250448 GPR75-ASB3A0A0A6YYF3 556 aa19.26■□□□□ 0.67
FOXA1-201ENST00000250448 UBE2Q2LH0YL09 131 aa19.26■□□□□ 0.67
FOXA1-201ENST00000250448 SSRP1Q08945 709 aaKnown RBP19.26■□□□□ 0.67
FOXA1-201ENST00000250448 TEX35Q5T0J7 233 aa19.26■□□□□ 0.67
FOXA1-201ENST00000250448 CC2D1AQ6P1N0 951 aaPredicted RBP19.26■□□□□ 0.67
FOXA1-201ENST00000250448 DACH1Q9UI36 760 aa19.26■□□□□ 0.67
FOXA1-201ENST00000250448 TBC1D8O95759 1140 aa19.26■□□□□ 0.67
FOXA1-201ENST00000250448 PRR29P0C7W0 189 aa19.26■□□□□ 0.67
FOXA1-201ENST00000250448 PLCD1P51178 756 aa19.26■□□□□ 0.67
FOXA1-201ENST00000250448 PPP4CP60510 307 aa19.26■□□□□ 0.67
FOXA1-201ENST00000250448 MLKLQ8NB16 471 aa19.26■□□□□ 0.67
FOXA1-201ENST00000250448 SLC16A10Q8TF71 515 aa19.26■□□□□ 0.67
FOXA1-201ENST00000250448 ESR2Q92731 530 aa19.26■□□□□ 0.67
FOXA1-201ENST00000250448 KIFC2Q96AC6 838 aa19.26■□□□□ 0.67
FOXA1-201ENST00000250448 UBAC1Q9BSL1 405 aa19.26■□□□□ 0.67
FOXA1-201ENST00000250448 UBXN6Q9BZV1 441 aa19.26■□□□□ 0.67
FOXA1-201ENST00000250448 ADAMTSL1Q8N6G6 1762 aa19.26■□□□□ 0.67
FOXA1-201ENST00000250448 CDK11BP21127 795 aaKnown RBP19.26■□□□□ 0.67
FOXA1-201ENST00000250448 ADKP55263 362 aaKnown RBP19.26■□□□□ 0.67
FOXA1-201ENST00000250448 RHBDL3P58872 404 aa19.26■□□□□ 0.67
FOXA1-201ENST00000250448 PICALMQ13492 652 aa19.26■□□□□ 0.67
FOXA1-201ENST00000250448 WTAPQ15007 396 aa19.26■□□□□ 0.67
FOXA1-201ENST00000250448 RSRC2Q7L4I2 434 aaKnown RBP19.26■□□□□ 0.67
FOXA1-201ENST00000250448 CMTR1Q8N1G2 835 aaKnown RBP19.26■□□□□ 0.67
FOXA1-201ENST00000250448 ENOX1Q8TC92 643 aaKnown RBP19.26■□□□□ 0.67
FOXA1-201ENST00000250448 TNKSO95271 1327 aa19.25■□□□□ 0.67
FOXA1-201ENST00000250448 POLR3GO15318 223 aaPredicted RBP19.25■□□□□ 0.67
FOXA1-201ENST00000250448 FMNL1O95466 1100 aaPredicted RBP19.25■□□□□ 0.67
FOXA1-201ENST00000250448 CCDC82Q8N4S0 544 aa19.25■□□□□ 0.67
FOXA1-201ENST00000250448 ARPP21Q9UBL0 812 aaPredicted RBP19.25■□□□□ 0.67
FOXA1-201ENST00000250448 FBXO2Q9UK22 296 aaPredicted RBP19.25■□□□□ 0.67
FOXA1-201ENST00000250448 SLC12A7Q9Y666 1083 aa19.25■□□□□ 0.67
FOXA1-201ENST00000250448 PPIP5K2O43314 1243 aa19.25■□□□□ 0.67
FOXA1-201ENST00000250448 SASH3O75995 380 aa19.25■□□□□ 0.67
FOXA1-201ENST00000250448 MORC3Q14149 939 aa19.25■□□□□ 0.67
FOXA1-201ENST00000250448 NT5DC1Q5TFE4 455 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms