RNA–Protein interactions for RNA: ENST00000250066.6

USP6-201, Transcript of ubiquitin specific peptidase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP6, Length 7,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-201ENST00000250066 SPATA17Q96L03 361 aa9.48□□□□□ -0.89
USP6-201ENST00000250066 MCM9Q9NXL9 1143 aa9.48□□□□□ -0.89
USP6-201ENST00000250066 CCPG1Q9ULG6 757 aa9.48□□□□□ -0.89
USP6-201ENST00000250066 SLMAPQ14BN4 828 aa9.48□□□□□ -0.89
USP6-201ENST00000250066 TSC22D3Q99576 134 aa9.48□□□□□ -0.89
USP6-201ENST00000250066 TRPC5Q9UL62 973 aaPredicted RBP9.48□□□□□ -0.89
USP6-201ENST00000250066 DNM2P50570 870 aa9.48□□□□□ -0.89
USP6-201ENST00000250066 PAK1Q13153 545 aa9.48□□□□□ -0.89
USP6-201ENST00000250066 TJAP1Q5JTD0 557 aa9.48□□□□□ -0.89
USP6-201ENST00000250066 CCDC84Q86UT8 332 aaPredicted RBP9.48□□□□□ -0.89
USP6-201ENST00000250066 SKAP1Q86WV1 359 aa9.48□□□□□ -0.89
USP6-201ENST00000250066 CSRNP1Q96S65 589 aa9.48□□□□□ -0.89
USP6-201ENST00000250066 THUMPD2Q9BTF0 503 aaKnown RBP9.48□□□□□ -0.89
USP6-201ENST00000250066 UPF3AQ9H1J1 476 aaKnown RBP9.48□□□□□ -0.89
USP6-201ENST00000250066 PLEKHA4Q9H4M7 779 aa9.48□□□□□ -0.89
USP6-201ENST00000250066 FOXD4Q12950 439 aaPredicted RBP9.48□□□□□ -0.89
USP6-201ENST00000250066 MYSM1Q5VVJ2 828 aa9.48□□□□□ -0.89
USP6-201ENST00000250066 RINT1Q6NUQ1 792 aa9.48□□□□□ -0.89
USP6-201ENST00000250066 SCYL2Q6P3W7 929 aa9.48□□□□□ -0.89
USP6-201ENST00000250066 SERPINI1Q99574 410 aa9.48□□□□□ -0.89
USP6-201ENST00000250066 MED10Q9BTT4 135 aa9.48□□□□□ -0.89
USP6-201ENST00000250066 ERICH3Q5RHP9 1530 aa9.48□□□□□ -0.89
USP6-201ENST00000250066 ATP5J2-PTCD1G3V325 749 aa9.48□□□□□ -0.89
USP6-201ENST00000250066 PARP1P09874 1014 aaKnown RBP9.48□□□□□ -0.89
USP6-201ENST00000250066 DIABLOQ9NR28 239 aa9.48□□□□□ -0.89
USP6-201ENST00000250066 RAB20Q9NX57 234 aa9.48□□□□□ -0.89
USP6-201ENST00000250066 KIF14Q15058 1648 aa9.48□□□□□ -0.89
USP6-201ENST00000250066 XPAP23025 273 aaPredicted RBP9.47□□□□□ -0.89
USP6-201ENST00000250066 RARSP54136 660 aaKnown RBP9.47□□□□□ -0.89
USP6-201ENST00000250066 GRIN1Q05586 938 aa9.47□□□□□ -0.89
USP6-201ENST00000250066 HADHQ16836 314 aaKnown RBP9.47□□□□□ -0.89
USP6-201ENST00000250066 N4BP2L2Q92802 583 aaPredicted RBP9.47□□□□□ -0.89
USP6-201ENST00000250066 TRAIPQ9BWF2 469 aa9.47□□□□□ -0.89
USP6-201ENST00000250066 ING2Q9H160 280 aa9.47□□□□□ -0.89
USP6-201ENST00000250066 ANGPTL2Q9UKU9 493 aa9.47□□□□□ -0.89
USP6-201ENST00000250066 AK9Q5TCS8 1911 aa9.47□□□□□ -0.89
USP6-201ENST00000250066 HMGB3O15347 200 aaKnown RBP9.47□□□□□ -0.89
USP6-201ENST00000250066 IFT88Q13099 833 aa9.47□□□□□ -0.89
USP6-201ENST00000250066 NMIQ13287 307 aaPredicted RBP9.47□□□□□ -0.89
USP6-201ENST00000250066 SLC9C2Q5TAH2 1124 aa9.47□□□□□ -0.89
USP6-201ENST00000250066 TNNI1P19237 187 aa9.47□□□□□ -0.89
USP6-201ENST00000250066 BRD3Q15059 726 aa9.47□□□□□ -0.89
USP6-201ENST00000250066 KHDRBS2Q5VWX1 349 aaKnown RBP9.47□□□□□ -0.89
USP6-201ENST00000250066 ANGPTL8Q6UXH0 198 aa9.47□□□□□ -0.89
USP6-201ENST00000250066 POLR2BP30876 1174 aaKnown RBP9.47□□□□□ -0.89
USP6-201ENST00000250066 ZKSCAN8Q15776 578 aaPredicted RBP9.47□□□□□ -0.89
USP6-201ENST00000250066 CHST3Q7LGC8 479 aa9.47□□□□□ -0.89
USP6-201ENST00000250066 CCDC197Q8NCU1 140 aa9.47□□□□□ -0.89
USP6-201ENST00000250066 RPS6KC1Q96S38 1066 aa9.47□□□□□ -0.89
USP6-201ENST00000250066 DDX28Q9NUL7 540 aaKnown RBP9.47□□□□□ -0.89
USP6-201ENST00000250066 WARS2Q9UGM6 360 aaKnown RBP9.47□□□□□ -0.89
USP6-201ENST00000250066 YARSP54577 528 aaKnown RBP9.47□□□□□ -0.89
USP6-201ENST00000250066 MYRIPQ8NFW9 859 aa9.47□□□□□ -0.89
USP6-201ENST00000250066 HOOK2Q96ED9 719 aa9.47□□□□□ -0.89
USP6-201ENST00000250066 UBN1Q9NPG3 1134 aa9.47□□□□□ -0.89
USP6-201ENST00000250066 EHBP1L1Q8N3D4 1523 aa9.47□□□□□ -0.89
USP6-201ENST00000250066 STAM2O75886 525 aa9.47□□□□□ -0.89
USP6-201ENST00000250066 PDE1BQ01064 536 aa9.47□□□□□ -0.89
USP6-201ENST00000250066 E2F5Q15329 346 aa9.47□□□□□ -0.89
USP6-201ENST00000250066 NME8Q8N427 588 aa9.47□□□□□ -0.89
USP6-201ENST00000250066 TRIM58Q8NG06 486 aa9.47□□□□□ -0.89
USP6-201ENST00000250066 TRIM15Q9C019 465 aa9.47□□□□□ -0.89
USP6-201ENST00000250066 POLKQ9UBT6 870 aa9.47□□□□□ -0.89
USP6-201ENST00000250066 TYW5A2RUC4 315 aaKnown RBP9.46□□□□□ -0.89
USP6-201ENST00000250066 KCNK3O14649 394 aa9.46□□□□□ -0.89
USP6-201ENST00000250066 APOA1P02647 267 aa9.46□□□□□ -0.89
USP6-201ENST00000250066 ZNF174Q15697 407 aa9.46□□□□□ -0.89
USP6-201ENST00000250066 KLHL29Q96CT2 875 aa9.46□□□□□ -0.89
USP6-201ENST00000250066 COG4Q9H9E3 785 aa9.46□□□□□ -0.89
USP6-201ENST00000250066 KRT87PA6NCN2 255 aa9.46□□□□□ -0.89
USP6-201ENST00000250066 TEX11Q8IYF3 940 aa9.46□□□□□ -0.89
USP6-201ENST00000250066 MYCT1Q8N699 235 aa9.46□□□□□ -0.89
USP6-201ENST00000250066 GOLGA5Q8TBA6 731 aa9.46□□□□□ -0.89
USP6-201ENST00000250066 SETDB2Q96T68 719 aa9.46□□□□□ -0.89
USP6-201ENST00000250066 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.46□□□□□ -0.89
USP6-201ENST00000250066 CAMSAP2Q08AD1 1489 aa9.46□□□□□ -0.89
USP6-201ENST00000250066 EXOC3O60645 756 aa9.46□□□□□ -0.89
USP6-201ENST00000250066 NBNO60934 754 aa9.46□□□□□ -0.89
USP6-201ENST00000250066 RAB3GAP1Q15042 981 aa9.46□□□□□ -0.89
USP6-201ENST00000250066 LONRF3Q496Y0 759 aa9.46□□□□□ -0.89
USP6-201ENST00000250066 SH2D4AQ9H788 454 aa9.46□□□□□ -0.89
USP6-201ENST00000250066 PICK1Q9NRD5 415 aa9.46□□□□□ -0.89
USP6-201ENST00000250066 IQSEC3Q9UPP2 1182 aaPredicted RBP9.46□□□□□ -0.89
USP6-201ENST00000250066 ABCC11Q96J66 1382 aa9.46□□□□□ -0.89
USP6-201ENST00000250066 KDM1AO60341 852 aa9.46□□□□□ -0.9
USP6-201ENST00000250066 NR1I2O75469 434 aa9.46□□□□□ -0.9
USP6-201ENST00000250066 HEXIM1O94992 359 aaKnown RBP9.46□□□□□ -0.9
USP6-201ENST00000250066 INTS9Q9NV88 658 aaKnown RBP9.46□□□□□ -0.9
USP6-201ENST00000250066 STAT1P42224 750 aa9.46□□□□□ -0.9
USP6-201ENST00000250066 TYW1BQ6NUM6 668 aa9.46□□□□□ -0.9
USP6-201ENST00000250066 FAM180AQ6UWF9 173 aa9.46□□□□□ -0.9
USP6-201ENST00000250066 RINLQ6ZS11 566 aa9.46□□□□□ -0.9
USP6-201ENST00000250066 POC1B-GALNT4F8VUJ3 575 aa9.46□□□□□ -0.9
USP6-201ENST00000250066 HNRNPCP07910 306 aaKnown RBP eCLIP9.46□□□□□ -0.9
USP6-201ENST00000250066 GIPC2Q8TF65 315 aa9.46□□□□□ -0.9
USP6-201ENST00000250066 SYTL2Q9HCH5 934 aa9.46□□□□□ -0.9
USP6-201ENST00000250066 CHCHD3Q9NX63 227 aaKnown RBP9.46□□□□□ -0.9
USP6-201ENST00000250066 ATF2P15336 505 aa9.45□□□□□ -0.9
USP6-201ENST00000250066 PLEKHM3Q6ZWE6 761 aa9.45□□□□□ -0.9
USP6-201ENST00000250066 C2CD5Q86YS7 1000 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms