RNA–Protein interactions for RNA: ENST00000227266.9

CTSC-201, Transcript of cathepsin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSC, Length 1,921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-201ENST00000227266 IRF6O14896 467 aa12.94□□□□□ -0.34
CTSC-201ENST00000227266 PLEKHA8P1O95397 391 aa12.94□□□□□ -0.34
CTSC-201ENST00000227266 SNHG28P0DPA3 235 aa12.94□□□□□ -0.34
CTSC-201ENST00000227266 USP14P54578 494 aa12.94□□□□□ -0.34
CTSC-201ENST00000227266 ZNF543Q08ER8 600 aa12.94□□□□□ -0.34
CTSC-201ENST00000227266 DCAF4Q8WV16 495 aa12.94□□□□□ -0.34
CTSC-201ENST00000227266 GMCL1Q96IK5 515 aa12.94□□□□□ -0.34
CTSC-201ENST00000227266 MAP3K14Q99558 947 aa12.94□□□□□ -0.34
CTSC-201ENST00000227266 RBM28Q9NW13 759 aaKnown RBP12.94□□□□□ -0.34
CTSC-201ENST00000227266 KLRF2D3W0D1 207 aa12.93□□□□□ -0.34
CTSC-201ENST00000227266 MKRN3Q13064 507 aaKnown RBP12.93□□□□□ -0.34
CTSC-201ENST00000227266 PPIL2Q13356 520 aa12.93□□□□□ -0.34
CTSC-201ENST00000227266 PPP2R5BQ15173 497 aa12.93□□□□□ -0.34
CTSC-201ENST00000227266 ASPRV1Q53RT3 343 aa12.93□□□□□ -0.34
CTSC-201ENST00000227266 FAM83BQ5T0W9 1011 aa12.93□□□□□ -0.34
CTSC-201ENST00000227266 CPLX2Q6PUV4 134 aaKnown RBP12.93□□□□□ -0.34
CTSC-201ENST00000227266 TMTC3Q6ZXV5 915 aa12.93□□□□□ -0.34
CTSC-201ENST00000227266 SAPCD2Q86UD0 394 aa12.93□□□□□ -0.34
CTSC-201ENST00000227266 CPVLQ9H3G5 476 aa12.93□□□□□ -0.34
CTSC-201ENST00000227266 EMILIN3Q9NT22 766 aa12.93□□□□□ -0.34
CTSC-201ENST00000227266 ABT1Q9ULW3 272 aaKnown RBP12.93□□□□□ -0.34
CTSC-201ENST00000227266 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.93□□□□□ -0.34
CTSC-201ENST00000227266 NID2Q14112 1375 aa12.93□□□□□ -0.34
CTSC-201ENST00000227266 DOCK1Q14185 1865 aa12.93□□□□□ -0.34
CTSC-201ENST00000227266 PALM3A6NDB9 673 aaPredicted RBP12.92□□□□□ -0.34
CTSC-201ENST00000227266 TMEM88BA6NKF7 163 aa12.92□□□□□ -0.34
CTSC-201ENST00000227266 C19orf81C9J6K1 198 aa12.92□□□□□ -0.34
CTSC-201ENST00000227266 JAK2O60674 1132 aa12.92□□□□□ -0.34
CTSC-201ENST00000227266 CTDNEP1O95476 244 aa12.92□□□□□ -0.34
CTSC-201ENST00000227266 BMP3P12645 472 aa12.92□□□□□ -0.34
CTSC-201ENST00000227266 GJA5P36382 358 aa12.92□□□□□ -0.34
CTSC-201ENST00000227266 IKQ13123 557 aaPredicted RBP12.92□□□□□ -0.34
CTSC-201ENST00000227266 NFKBIBQ15653 356 aa12.92□□□□□ -0.34
CTSC-201ENST00000227266 TTBK2Q6IQ55 1244 aa12.92□□□□□ -0.34
CTSC-201ENST00000227266 PHKBQ93100 1093 aa12.92□□□□□ -0.34
CTSC-201ENST00000227266 DDX11Q96FC9 970 aa12.92□□□□□ -0.34
CTSC-201ENST00000227266 UBA5Q9GZZ9 404 aa12.92□□□□□ -0.34
CTSC-201ENST00000227266 TMOD4Q9NZQ9 345 aa12.92□□□□□ -0.34
CTSC-201ENST00000227266 PTPDC1A2A3K4 754 aa12.92□□□□□ -0.34
CTSC-201ENST00000227266 TMEM232C9JQI7 657 aa12.92□□□□□ -0.34
CTSC-201ENST00000227266 CDKL5O76039 1030 aa12.92□□□□□ -0.34
CTSC-201ENST00000227266 VCAM1P19320 739 aa12.92□□□□□ -0.34
CTSC-201ENST00000227266 SLC16A2P36021 539 aa12.92□□□□□ -0.34
CTSC-201ENST00000227266 GNAQP50148 359 aa12.92□□□□□ -0.34
CTSC-201ENST00000227266 ZNF157P51786 506 aaPredicted RBP12.92□□□□□ -0.34
CTSC-201ENST00000227266 GPATCH4Q5T3I0 446 aaKnown RBP12.92□□□□□ -0.34
CTSC-201ENST00000227266 NBPF11Q86T75 865 aa12.92□□□□□ -0.34
CTSC-201ENST00000227266 SRBD1Q8N5C6 995 aaKnown RBP12.92□□□□□ -0.34
CTSC-201ENST00000227266 NSUN7Q8NE18 718 aaKnown RBP12.92□□□□□ -0.34
CTSC-201ENST00000227266 PIBF1Q8WXW3 757 aa12.92□□□□□ -0.34
CTSC-201ENST00000227266 LPAR1Q92633 364 aa12.92□□□□□ -0.34
CTSC-201ENST00000227266 WNK4Q96J92 1243 aa12.92□□□□□ -0.34
CTSC-201ENST00000227266 SMC3Q9UQE7 1217 aa12.92□□□□□ -0.34
CTSC-201ENST00000227266 CXCL11O14625 94 aa12.91□□□□□ -0.34
CTSC-201ENST00000227266 NTRK3Q16288 839 aa12.91□□□□□ -0.34
CTSC-201ENST00000227266 SAMD1Q6SPF0 538 aaPredicted RBP12.91□□□□□ -0.34
CTSC-201ENST00000227266 INTS4Q96HW7 963 aaKnown RBP12.91□□□□□ -0.34
CTSC-201ENST00000227266 LLPHQ9BRT6 129 aaKnown RBP12.91□□□□□ -0.34
CTSC-201ENST00000227266 SLC26A6Q9BXS9 759 aa12.91□□□□□ -0.34
CTSC-201ENST00000227266 TANGO6Q9C0B7 1094 aa12.91□□□□□ -0.34
CTSC-201ENST00000227266 VAT1LQ9HCJ6 419 aa12.91□□□□□ -0.34
CTSC-201ENST00000227266 TLL2Q9Y6L7 1015 aa12.91□□□□□ -0.34
CTSC-201ENST00000227266 OTOFQ9HC10 1997 aa12.91□□□□□ -0.34
CTSC-201ENST00000227266 ATAD5Q96QE3 1844 aa12.91□□□□□ -0.34
CTSC-201ENST00000227266 hCG_1642624A0A1W2PR95 340 aa12.9□□□□□ -0.34
CTSC-201ENST00000227266 WDR46O15213 610 aaKnown RBP12.9□□□□□ -0.34
CTSC-201ENST00000227266 IFNAR1P17181 557 aa12.9□□□□□ -0.34
CTSC-201ENST00000227266 GADL1Q6ZQY3 521 aa12.9□□□□□ -0.34
CTSC-201ENST00000227266 LZTS2Q9BRK4 669 aa12.9□□□□□ -0.34
CTSC-201ENST00000227266 RPAP3Q9H6T3 665 aaPredicted RBP12.9□□□□□ -0.34
CTSC-201ENST00000227266 KCNH4Q9UQ05 1017 aa12.9□□□□□ -0.34
CTSC-201ENST00000227266 A0A0G2JLL6 359 aaPredicted RBP12.9□□□□□ -0.35
CTSC-201ENST00000227266 GJB2P29033 226 aa12.9□□□□□ -0.35
CTSC-201ENST00000227266 SSRP1Q08945 709 aaKnown RBP12.9□□□□□ -0.35
CTSC-201ENST00000227266 FUT2Q10981 343 aa12.9□□□□□ -0.35
CTSC-201ENST00000227266 SNAPC2Q13487 334 aa12.9□□□□□ -0.35
CTSC-201ENST00000227266 SLC35G1Q2M3R5 365 aa12.9□□□□□ -0.35
CTSC-201ENST00000227266 SH3D19Q5HYK7 790 aa12.9□□□□□ -0.35
CTSC-201ENST00000227266 SPRYD7Q5W111 196 aa12.9□□□□□ -0.35
CTSC-201ENST00000227266 RGMBQ6NW40 437 aa12.9□□□□□ -0.35
CTSC-201ENST00000227266 PRRT2Q7Z6L0 340 aaPredicted RBP12.9□□□□□ -0.35
CTSC-201ENST00000227266 TRIM22Q8IYM9 498 aa12.9□□□□□ -0.35
CTSC-201ENST00000227266 C12orf42Q96LP6 360 aa12.9□□□□□ -0.35
CTSC-201ENST00000227266 ORC3Q9UBD5 711 aaPredicted RBP12.9□□□□□ -0.35
CTSC-201ENST00000227266 V9GY48 417 aaPredicted RBP12.9□□□□□ -0.35
CTSC-201ENST00000227266 CYTH3O43739 400 aa12.89□□□□□ -0.35
CTSC-201ENST00000227266 STAT2P52630 851 aa12.89□□□□□ -0.35
CTSC-201ENST00000227266 AKAP17AQ02040 695 aaKnown RBP12.89□□□□□ -0.35
CTSC-201ENST00000227266 PAXIP1Q6ZW49 1069 aaPredicted RBP12.89□□□□□ -0.35
CTSC-201ENST00000227266 HOMER1Q86YM7 354 aa12.89□□□□□ -0.35
CTSC-201ENST00000227266 SMARCC2Q8TAQ2 1214 aa12.89□□□□□ -0.35
CTSC-201ENST00000227266 FBXO28Q9NVF7 368 aa12.89□□□□□ -0.35
CTSC-201ENST00000227266 CNTNAP5Q8WYK1 1306 aa12.89□□□□□ -0.35
CTSC-201ENST00000227266 FLOT1O75955 427 aa12.88□□□□□ -0.35
CTSC-201ENST00000227266 FMNL1O95466 1100 aaPredicted RBP12.88□□□□□ -0.35
CTSC-201ENST00000227266 HMGN5P82970 282 aaKnown RBP12.88□□□□□ -0.35
CTSC-201ENST00000227266 GRM1Q13255 1194 aa12.88□□□□□ -0.35
CTSC-201ENST00000227266 TREML2Q5T2D2 321 aa12.88□□□□□ -0.35
CTSC-201ENST00000227266 SYDE2Q5VT97 1194 aa12.88□□□□□ -0.35
CTSC-201ENST00000227266 RASAL3Q86YV0 1011 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms