RNA–Protein interactions for RNA: ENST00000218200.12

FMR1-201, Transcript of fragile X mental retardation 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FMR1, Length 4,333 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-201ENST00000218200 SNX29Q8TEQ0 813 aa23.13■■□□□ 1.29
FMR1-201ENST00000218200 LRWD1Q9UFC0 647 aa23.13■■□□□ 1.29
FMR1-201ENST00000218200 FAM13AO94988 1023 aa23.13■■□□□ 1.29
FMR1-201ENST00000218200 GPKOWQ92917 476 aaPredicted RBP eCLIP23.13■■□□□ 1.29
FMR1-201ENST00000218200 RTEL1Q9NZ71 1219 aa23.13■■□□□ 1.29
FMR1-201ENST00000218200 EPN1Q9Y6I3 576 aaPredicted RBP23.13■■□□□ 1.29
FMR1-201ENST00000218200 PLCD1P51178 756 aa23.12■■□□□ 1.29
FMR1-201ENST00000218200 PTGDRQ13258 359 aa23.12■■□□□ 1.29
FMR1-201ENST00000218200 MGARPQ8TDB4 240 aa23.12■■□□□ 1.29
FMR1-201ENST00000218200 PIGBQ92521 554 aa23.12■■□□□ 1.29
FMR1-201ENST00000218200 LDHBP07195 334 aaKnown RBP23.12■■□□□ 1.29
FMR1-201ENST00000218200 PNMA6AP0CW24 399 aaPredicted RBP23.12■■□□□ 1.29
FMR1-201ENST00000218200 FANCBQ8NB91 859 aa23.12■■□□□ 1.29
FMR1-201ENST00000218200 NSRP1Q9H0G5 558 aaKnown RBP23.12■■□□□ 1.29
FMR1-201ENST00000218200 CIAO1O76071 339 aa23.12■■□□□ 1.29
FMR1-201ENST00000218200 RESTQ13127 1097 aa23.12■■□□□ 1.29
FMR1-201ENST00000218200 SLC39A14Q15043 492 aa23.12■■□□□ 1.29
FMR1-201ENST00000218200 NAA35Q5VZE5 725 aa23.12■■□□□ 1.29
FMR1-201ENST00000218200 STXBP4Q6ZWJ1 553 aa23.12■■□□□ 1.29
FMR1-201ENST00000218200 TCHPQ9BT92 498 aa23.12■■□□□ 1.29
FMR1-201ENST00000218200 USP42Q9H9J4 1324 aaKnown RBP23.12■■□□□ 1.29
FMR1-201ENST00000218200 SPDYE3A6NKU9 549 aa23.12■■□□□ 1.29
FMR1-201ENST00000218200 GOLGA8HP0CJ92 632 aa23.12■■□□□ 1.29
FMR1-201ENST00000218200 TFAP4Q01664 338 aa23.12■■□□□ 1.29
FMR1-201ENST00000218200 KLHL30Q0D2K2 578 aa23.12■■□□□ 1.29
FMR1-201ENST00000218200 MORC3Q14149 939 aa23.12■■□□□ 1.29
FMR1-201ENST00000218200 SLF2Q8IX21 1173 aa23.12■■□□□ 1.29
FMR1-201ENST00000218200 RASGRP4Q8TDF6 673 aa23.12■■□□□ 1.29
FMR1-201ENST00000218200 LMBR1Q8WVP7 490 aa23.12■■□□□ 1.29
FMR1-201ENST00000218200 RASAL2Q9UJF2 1139 aa23.12■■□□□ 1.29
FMR1-201ENST00000218200 ARID4AP29374 1257 aaPredicted RBP23.11■■□□□ 1.29
FMR1-201ENST00000218200 CEP85LQ5SZL2 805 aa23.11■■□□□ 1.29
FMR1-201ENST00000218200 B4GALNT4Q76KP1 1039 aa23.11■■□□□ 1.29
FMR1-201ENST00000218200 OSBP2Q969R2 916 aa23.11■■□□□ 1.29
FMR1-201ENST00000218200 CARMIL3Q8ND23 1372 aa23.11■■□□□ 1.29
FMR1-201ENST00000218200 CHGBP05060 677 aa23.11■■□□□ 1.29
FMR1-201ENST00000218200 PHKA1P46020 1223 aa23.11■■□□□ 1.29
FMR1-201ENST00000218200 CALCOCO2Q13137 446 aa23.11■■□□□ 1.29
FMR1-201ENST00000218200 INF2Q27J81 1249 aa23.11■■□□□ 1.29
FMR1-201ENST00000218200 CSRNP2Q9H175 543 aa23.11■■□□□ 1.29
FMR1-201ENST00000218200 BUB1BO60566 1050 aaPredicted RBP23.11■■□□□ 1.29
FMR1-201ENST00000218200 BCAMP50895 628 aa23.11■■□□□ 1.29
FMR1-201ENST00000218200 IFT20Q8IY31 132 aa23.11■■□□□ 1.29
FMR1-201ENST00000218200 IFNL3Q8IZI9 196 aa23.11■■□□□ 1.29
FMR1-201ENST00000218200 ZNF335Q9H4Z2 1342 aaPredicted RBP23.11■■□□□ 1.29
FMR1-201ENST00000218200 NEBLO76041 1014 aa23.1■■□□□ 1.29
FMR1-201ENST00000218200 TERF2Q15554 542 aa23.1■■□□□ 1.29
FMR1-201ENST00000218200 FAM212AQ96EL1 285 aa23.1■■□□□ 1.29
FMR1-201ENST00000218200 KAZALD1Q96I82 304 aa23.1■■□□□ 1.29
FMR1-201ENST00000218200 PPP1R12CQ9BZL4 782 aa23.1■■□□□ 1.29
FMR1-201ENST00000218200 CDC23Q9UJX2 597 aa23.1■■□□□ 1.29
FMR1-201ENST00000218200 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.1■■□□□ 1.29
FMR1-201ENST00000218200 SPOPO43791 374 aa23.1■■□□□ 1.29
FMR1-201ENST00000218200 PARP1P09874 1014 aaKnown RBP23.1■■□□□ 1.29
FMR1-201ENST00000218200 ABCB4P21439 1286 aa23.1■■□□□ 1.29
FMR1-201ENST00000218200 KMT5BQ4FZB7 885 aa23.1■■□□□ 1.29
FMR1-201ENST00000218200 SYMPKQ92797 1274 aaKnown RBP23.1■■□□□ 1.29
FMR1-201ENST00000218200 CCDC87Q9NVE4 849 aa23.1■■□□□ 1.29
FMR1-201ENST00000218200 TNKSO95271 1327 aa23.1■■□□□ 1.29
FMR1-201ENST00000218200 STX10O60499 249 aa23.1■■□□□ 1.29
FMR1-201ENST00000218200 CYP27A1Q02318 531 aa23.1■■□□□ 1.29
FMR1-201ENST00000218200 RBL2Q08999 1139 aa23.1■■□□□ 1.29
FMR1-201ENST00000218200 TOB2Q14106 344 aaPredicted RBP23.1■■□□□ 1.29
FMR1-201ENST00000218200 TRIM14Q14142 442 aa23.1■■□□□ 1.29
FMR1-201ENST00000218200 PLVAPQ9BX97 442 aa23.1■■□□□ 1.29
FMR1-201ENST00000218200 M0R2C6 588 aa23.09■■□□□ 1.29
FMR1-201ENST00000218200 CCDC172P0C7W6 258 aa23.09■■□□□ 1.29
FMR1-201ENST00000218200 APOA5Q6Q788 366 aa23.09■■□□□ 1.29
FMR1-201ENST00000218200 CCDC160A6NGH7 325 aa23.09■■□□□ 1.29
FMR1-201ENST00000218200 ACTN2P35609 894 aa23.09■■□□□ 1.29
FMR1-201ENST00000218200 GYG1P46976 350 aa23.09■■□□□ 1.29
FMR1-201ENST00000218200 PPFIA1Q13136 1202 aa23.09■■□□□ 1.29
FMR1-201ENST00000218200 SLC39A2Q9NP94 309 aa23.09■■□□□ 1.29
FMR1-201ENST00000218200 RABGGTAQ92696 567 aa23.09■■□□□ 1.29
FMR1-201ENST00000218200 CCDC77Q9BR77 488 aa23.09■■□□□ 1.29
FMR1-201ENST00000218200 IQCGQ9H095 443 aaKnown RBP23.09■■□□□ 1.29
FMR1-201ENST00000218200 TMEM232C9JQI7 657 aa23.09■■□□□ 1.29
FMR1-201ENST00000218200 UAP1Q16222 522 aaPredicted RBP23.09■■□□□ 1.29
FMR1-201ENST00000218200 MAPKAPK5Q8IW41 473 aa23.09■■□□□ 1.29
FMR1-201ENST00000218200 SYNE4Q8N205 404 aa23.09■■□□□ 1.29
FMR1-201ENST00000218200 MTRF1LQ9UGC7 380 aaKnown RBP23.09■■□□□ 1.29
FMR1-201ENST00000218200 ARHGAP23Q9P227 1491 aa23.08■■□□□ 1.29
FMR1-201ENST00000218200 SRGAP1Q7Z6B7 1085 aa23.08■■□□□ 1.29
FMR1-201ENST00000218200 CABP7Q86V35 215 aa23.08■■□□□ 1.29
FMR1-201ENST00000218200 RBM28Q9NW13 759 aaKnown RBP23.08■■□□□ 1.29
FMR1-201ENST00000218200 SLIT1O75093 1534 aa23.08■■□□□ 1.29
FMR1-201ENST00000218200 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.08■■□□□ 1.29
FMR1-201ENST00000218200 SNAP23O00161 211 aa23.08■■□□□ 1.29
FMR1-201ENST00000218200 VPS41P49754 854 aa23.08■■□□□ 1.29
FMR1-201ENST00000218200 TEX11Q8IYF3 940 aa23.08■■□□□ 1.29
FMR1-201ENST00000218200 DPH5Q9H2P9 285 aa23.08■■□□□ 1.29
FMR1-201ENST00000218200 PARP10Q53GL7 1025 aa23.08■■□□□ 1.28
FMR1-201ENST00000218200 CNNM4Q6P4Q7 775 aa23.08■■□□□ 1.28
FMR1-201ENST00000218200 NCAPH2Q6IBW4 605 aa23.07■■□□□ 1.28
FMR1-201ENST00000218200 CCDC65Q8IXS2 484 aa23.07■■□□□ 1.28
FMR1-201ENST00000218200 TSGA10Q9BZW7 698 aa23.07■■□□□ 1.28
FMR1-201ENST00000218200 RRP15Q9Y3B9 282 aaKnown RBP23.07■■□□□ 1.28
FMR1-201ENST00000218200 CETN3O15182 167 aa23.07■■□□□ 1.28
FMR1-201ENST00000218200 TECP42680 631 aa23.07■■□□□ 1.28
FMR1-201ENST00000218200 SPATA1Q5VX52 437 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms