RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Trappc10Q3TLI0 1259 aa18.09■□□□□ 0.49
Trim39-203ENSMUST00000113706 Slc10a5Q5PT54 434 aa18.09■□□□□ 0.49
Trim39-203ENSMUST00000113706 CbarpQ66L44 698 aa18.09■□□□□ 0.49
Trim39-203ENSMUST00000113706 Nat10Q8K224 1024 aaKnown RBP18.09■□□□□ 0.49
Trim39-203ENSMUST00000113706 Xpo4Q9ESJ0 1151 aa18.09■□□□□ 0.49
Trim39-203ENSMUST00000113706 Pabpc1lA2A5N3 607 aaKnown RBP18.08■□□□□ 0.49
Trim39-203ENSMUST00000113706 Flvcr1B2RXV4 560 aa18.08■□□□□ 0.49
Trim39-203ENSMUST00000113706 Cfap70D3YVL2 1141 aa18.08■□□□□ 0.49
Trim39-203ENSMUST00000113706 Arid4aF8VPQ2 1261 aaKnown RBP18.08■□□□□ 0.49
Trim39-203ENSMUST00000113706 Kiaa1468Q148V7 1216 aa18.08■□□□□ 0.49
Trim39-203ENSMUST00000113706 Ube2oQ6ZPJ3 1288 aa18.08■□□□□ 0.49
Trim39-203ENSMUST00000113706 Rps6ka5Q8C050 863 aa18.08■□□□□ 0.49
Trim39-203ENSMUST00000113706 Pitpnm2Q6ZPQ6 1335 aa18.08■□□□□ 0.49
Trim39-203ENSMUST00000113706 Myh14Q6URW6 2000 aa18.08■□□□□ 0.48
Trim39-203ENSMUST00000113706 Sema3fO88632 785 aa18.08■□□□□ 0.48
Trim39-203ENSMUST00000113706 Cyp2c67Q569X9 491 aa18.08■□□□□ 0.48
Trim39-203ENSMUST00000113706 Vps53Q8CCB4 832 aa18.08■□□□□ 0.48
Trim39-203ENSMUST00000113706 Ttll1Q91V51 423 aa18.08■□□□□ 0.48
Trim39-203ENSMUST00000113706 Arhgef2Q60875 985 aa18.07■□□□□ 0.48
Trim39-203ENSMUST00000113706 LRWD1Q8BUI3 648 aaKnown RBP18.07■□□□□ 0.48
Trim39-203ENSMUST00000113706 Calml3Q9D6P8 149 aa18.07■□□□□ 0.48
Trim39-203ENSMUST00000113706 Acad12D3Z7X0 555 aa18.07■□□□□ 0.48
Trim39-203ENSMUST00000113706 Dlg1Q811D0 905 aaKnown RBP18.07■□□□□ 0.48
Trim39-203ENSMUST00000113706 Trim29Q8R2Q0 587 aa18.07■□□□□ 0.48
Trim39-203ENSMUST00000113706 Lmbr1Q9JIT0 490 aa18.07■□□□□ 0.48
Trim39-203ENSMUST00000113706 Bcorl1A2AQH4 1781 aa18.06■□□□□ 0.48
Trim39-203ENSMUST00000113706 Zfp853A0A1D5RM95 733 aa18.06■□□□□ 0.48
Trim39-203ENSMUST00000113706 Cdc27A2A6Q5 825 aa18.06■□□□□ 0.48
Trim39-203ENSMUST00000113706 Tbc1d2B1AVH7 922 aa18.06■□□□□ 0.48
Trim39-203ENSMUST00000113706 MthfslL7N466 203 aa18.06■□□□□ 0.48
Trim39-203ENSMUST00000113706 Aco1P28271 889 aaKnown RBP18.06■□□□□ 0.48
Trim39-203ENSMUST00000113706 SsbP32067 415 aaKnown RBP18.06■□□□□ 0.48
Trim39-203ENSMUST00000113706 Rhpn1Q61085 643 aa18.06■□□□□ 0.48
Trim39-203ENSMUST00000113706 Sel1lQ9Z2G6 790 aa18.06■□□□□ 0.48
Trim39-203ENSMUST00000113706 Gm5114W4VSN8 858 aa18.06■□□□□ 0.48
Trim39-203ENSMUST00000113706 Tmem132bF7BAB2 1078 aa18.06■□□□□ 0.48
Trim39-203ENSMUST00000113706 Cdh15P33146 784 aa18.06■□□□□ 0.48
Trim39-203ENSMUST00000113706 Npr3P70180 536 aa18.06■□□□□ 0.48
Trim39-203ENSMUST00000113706 Tigd5Q499M4 642 aa18.06■□□□□ 0.48
Trim39-203ENSMUST00000113706 Rbm42Q91V81 474 aaKnown RBP18.06■□□□□ 0.48
Trim39-203ENSMUST00000113706 Nr2e3Q9QXZ7 395 aa18.06■□□□□ 0.48
Trim39-203ENSMUST00000113706 Ankrd1Q9CR42 319 aa18.06■□□□□ 0.48
Trim39-203ENSMUST00000113706 Tjap1Q9DCD5 539 aa18.06■□□□□ 0.48
Trim39-203ENSMUST00000113706 Gm973E9Q295 1059 aa18.05■□□□□ 0.48
Trim39-203ENSMUST00000113706 Clic6Q8BHB9 596 aa18.05■□□□□ 0.48
Trim39-203ENSMUST00000113706 Tmem87aQ8BXN9 555 aa18.05■□□□□ 0.48
Trim39-203ENSMUST00000113706 Serpina10Q8R121 448 aa18.05■□□□□ 0.48
Trim39-203ENSMUST00000113706 Atp12aQ9Z1W8 1035 aa18.05■□□□□ 0.48
Trim39-203ENSMUST00000113706 Gm21969J3QJZ1 289 aa18.05■□□□□ 0.48
Trim39-203ENSMUST00000113706 LtkP08923 888 aa18.05■□□□□ 0.48
Trim39-203ENSMUST00000113706 RdxP26043 583 aaKnown RBP18.05■□□□□ 0.48
Trim39-203ENSMUST00000113706 Fdx1P46656 188 aa18.05■□□□□ 0.48
Trim39-203ENSMUST00000113706 Ift74Q8BKE9 600 aa18.05■□□□□ 0.48
Trim39-203ENSMUST00000113706 Col1a1P11087 1453 aa18.04■□□□□ 0.48
Trim39-203ENSMUST00000113706 Clca4aQ6Q473 924 aa18.04■□□□□ 0.48
Trim39-203ENSMUST00000113706 Dctpp1Q9QY93 170 aa18.04■□□□□ 0.48
Trim39-203ENSMUST00000113706 Eddm13E9Q7F5 164 aa18.04■□□□□ 0.48
Trim39-203ENSMUST00000113706 Slc7a1Q09143 622 aa18.04■□□□□ 0.48
Trim39-203ENSMUST00000113706 Haus6Q6NV99 933 aaKnown RBP18.04■□□□□ 0.48
Trim39-203ENSMUST00000113706 Inpp4aQ9EPW0 939 aa18.04■□□□□ 0.48
Trim39-203ENSMUST00000113706 Col2a1P28481 1487 aa18.04■□□□□ 0.48
Trim39-203ENSMUST00000113706 Dhx8A2A4P0 1244 aaKnown RBP18.04■□□□□ 0.48
Trim39-203ENSMUST00000113706 Tbc1d9bQ5SVR0 1263 aa18.04■□□□□ 0.48
Trim39-203ENSMUST00000113706 Luc7l2Q7TNC4 392 aaKnown RBP18.04■□□□□ 0.48
Trim39-203ENSMUST00000113706 Tubgcp2Q921G8 905 aa18.04■□□□□ 0.48
Trim39-203ENSMUST00000113706 Grpel1Q99LP6 217 aa18.04■□□□□ 0.48
Trim39-203ENSMUST00000113706 Trpc5Q9QX29 975 aa18.04■□□□□ 0.48
Trim39-203ENSMUST00000113706 Btn2a2A4QPC6 514 aa18.03■□□□□ 0.48
Trim39-203ENSMUST00000113706 WaplQ65Z40 1200 aaKnown RBP18.03■□□□□ 0.48
Trim39-203ENSMUST00000113706 Hdac4Q6NZM9 1076 aa18.03■□□□□ 0.48
Trim39-203ENSMUST00000113706 Onecut3Q8K557 490 aa18.03■□□□□ 0.48
Trim39-203ENSMUST00000113706 TbcbQ9D1E6 244 aa18.03■□□□□ 0.48
Trim39-203ENSMUST00000113706 Gcnt1Q09324 428 aa18.03■□□□□ 0.48
Trim39-203ENSMUST00000113706 Ttbk2Q3UVR3 1243 aa18.03■□□□□ 0.48
Trim39-203ENSMUST00000113706 Brip1Q5SXJ3 1174 aa18.03■□□□□ 0.48
Trim39-203ENSMUST00000113706 Galnt17Q7TT15 598 aa18.03■□□□□ 0.48
Trim39-203ENSMUST00000113706 Glrx3Q9CQM9 337 aa18.03■□□□□ 0.48
Trim39-203ENSMUST00000113706 Scrn1Q9CZC8 414 aa18.03■□□□□ 0.48
Trim39-203ENSMUST00000113706 Klf15Q9EPW2 415 aa18.03■□□□□ 0.48
Trim39-203ENSMUST00000113706 Sap30bpQ02614 308 aa18.02■□□□□ 0.48
Trim39-203ENSMUST00000113706 PaoxQ8C0L6 504 aa18.02■□□□□ 0.48
Trim39-203ENSMUST00000113706 Cdan1Q8CC12 1239 aa18.02■□□□□ 0.48
Trim39-203ENSMUST00000113706 Tomm22Q9CPQ3 142 aa18.02■□□□□ 0.48
Trim39-203ENSMUST00000113706 Gm5134E9QAB5 671 aa18.02■□□□□ 0.48
Trim39-203ENSMUST00000113706 Psmd14O35593 310 aa18.02■□□□□ 0.48
Trim39-203ENSMUST00000113706 Klrk1O54709 232 aa18.02■□□□□ 0.48
Trim39-203ENSMUST00000113706 Slc27a3O88561 667 aa18.02■□□□□ 0.48
Trim39-203ENSMUST00000113706 Nr5a1P33242 462 aa18.02■□□□□ 0.48
Trim39-203ENSMUST00000113706 Gdf10P97737 476 aa18.02■□□□□ 0.48
Trim39-203ENSMUST00000113706 Dusp9Q7TNL7 452 aa18.02■□□□□ 0.48
Trim39-203ENSMUST00000113706 Eme2Q56A04 373 aa18.02■□□□□ 0.47
Trim39-203ENSMUST00000113706 Cnnm4Q69ZF7 771 aa18.02■□□□□ 0.47
Trim39-203ENSMUST00000113706 SltmQ8CH25 1031 aaKnown RBP18.02■□□□□ 0.47
Trim39-203ENSMUST00000113706 Magi2Q9WVQ1 1275 aa18.02■□□□□ 0.47
Trim39-203ENSMUST00000113706 Flt1P35969 1333 aa18.01■□□□□ 0.47
Trim39-203ENSMUST00000113706 LtbrP50284 415 aa18.01■□□□□ 0.47
Trim39-203ENSMUST00000113706 Anks1aP59672 1150 aa18.01■□□□□ 0.47
Trim39-203ENSMUST00000113706 Kctd1Q5M956 257 aa18.01■□□□□ 0.47
Trim39-203ENSMUST00000113706 LpxnQ99N69 386 aa18.01■□□□□ 0.47
Trim39-203ENSMUST00000113706 Nek3Q9R0A5 511 aa18.01■□□□□ 0.47
Retrieved 100 of 22,080 RNA–protein pairs in 15.5 ms