RNA–Protein interactions for RNA: YNL293W

MSB3, Transcript of Rab GTPase-activating protein, yeast

Gene MSB3, Length 1,902 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB3	YNL293W	MCM7	P38132	845 aa		7.17	□□□□□ -1.26
MSB3	YNL293W	CBR1	P38626	284 aa	Known RBP	7.17	□□□□□ -1.26
MSB3	YNL293W	YHR131C	P38835	850 aa		7.17	□□□□□ -1.26
MSB3	YNL293W	SOK1	P40317	901 aa		7.17	□□□□□ -1.26
MSB3	YNL293W	VMA13	P41807	478 aa	Known RBP	7.17	□□□□□ -1.26
MSB3	YNL293W	ROG3	P43602	733 aa		7.17	□□□□□ -1.26
MSB3	YNL293W	IDS2	P46958	469 aa		7.17	□□□□□ -1.26
MSB3	YNL293W	GLG2	P47011	380 aa		7.17	□□□□□ -1.26
MSB3	YNL293W	YPT32	P51996	222 aa	Known RBP	7.17	□□□□□ -1.26
MSB3	YNL293W	LSB1	P53281	241 aa		7.17	□□□□□ -1.26
MSB3	YNL293W	SNF12	P53628	566 aa		7.17	□□□□□ -1.26
MSB3	YNL293W	ERO1	Q03103	563 aa		7.17	□□□□□ -1.26
MSB3	YNL293W	YDR476C	Q03362	224 aa		7.17	□□□□□ -1.26
MSB3	YNL293W	SWF1	Q04629	336 aa		7.17	□□□□□ -1.26
MSB3	YNL293W	GAD1	Q04792	585 aa		7.17	□□□□□ -1.26
MSB3	YNL293W	PUS9	Q12069	462 aa		7.17	□□□□□ -1.26
MSB3	YNL293W	AVL9	Q12500	764 aa		7.17	□□□□□ -1.26
MSB3	YNL293W	RPA190	P10964	1664 aa	Known RBP	7.16	□□□□□ -1.26
MSB3	YNL293W	RPP2B	P02400	110 aa	Known RBP	7.16	□□□□□ -1.26
MSB3	YNL293W	LEU2	P04173	364 aa	Predicted RBP	7.16	□□□□□ -1.26
MSB3	YNL293W	TUB1	P09733	447 aa	Known RBP	7.16	□□□□□ -1.26
MSB3	YNL293W	AMD2	P22580	549 aa		7.16	□□□□□ -1.26
MSB3	YNL293W	PDC6	P26263	563 aa	Known RBP	7.16	□□□□□ -1.26
MSB3	YNL293W	SEC61	P32915	480 aa		7.16	□□□□□ -1.26
MSB3	YNL293W	GLO3	P38682	493 aa	Known RBP	7.16	□□□□□ -1.26
MSB3	YNL293W	YHR045W	P38775	560 aa		7.16	□□□□□ -1.26
MSB3	YNL293W	PSF2	P40359	213 aa		7.16	□□□□□ -1.26
MSB3	YNL293W	ATG32	P40458	529 aa		7.16	□□□□□ -1.26
MSB3	YNL293W	SLM1	P40485	686 aa		7.16	□□□□□ -1.26
MSB3	YNL293W	RPC17	P47076	161 aa		7.16	□□□□□ -1.26
MSB3	YNL293W	RPS7B	P48164	190 aa	Known RBP	7.16	□□□□□ -1.26
MSB3	YNL293W	ARO10	Q06408	635 aa		7.16	□□□□□ -1.26
MSB3	YNL293W	PGC1	Q08959	321 aa		7.16	□□□□□ -1.26
MSB3	YNL293W	YDR061W	Q12298	539 aa		7.16	□□□□□ -1.26
MSB3	YNL293W	ZRT2	Q12436	422 aa		7.16	□□□□□ -1.26
MSB3	YNL293W	PAA1	Q12447	191 aa	Known RBP	7.16	□□□□□ -1.26
MSB3	YNL293W	SCEI	P03882	235 aa		7.15	□□□□□ -1.26
MSB3	YNL293W	ADE5,7	P07244	802 aa	Known RBP	7.15	□□□□□ -1.26
MSB3	YNL293W	ILV2	P07342	687 aa	Known RBP	7.15	□□□□□ -1.26
MSB3	YNL293W	PHO8	P11491	566 aa		7.15	□□□□□ -1.26
MSB3	YNL293W	PFK1	P16861	987 aa	Known RBP	7.15	□□□□□ -1.26
MSB3	YNL293W	CNB1	P25296	175 aa		7.15	□□□□□ -1.26
MSB3	YNL293W	NPP1	P25353	742 aa		7.15	□□□□□ -1.26
MSB3	YNL293W	RRN6	P32786	894 aa		7.15	□□□□□ -1.26
MSB3	YNL293W	ELF1	P36053	145 aa		7.15	□□□□□ -1.26
MSB3	YNL293W	YKL133C	P36066	463 aa		7.15	□□□□□ -1.26
MSB3	YNL293W	QNS1	P38795	714 aa	Known RBP	7.15	□□□□□ -1.26
MSB3	YNL293W	SEO1	P39709	593 aa		7.15	□□□□□ -1.26
MSB3	YNL293W	DSE1	P40077	573 aa		7.15	□□□□□ -1.26
MSB3	YNL293W	IRC24	P40580	263 aa		7.15	□□□□□ -1.26
MSB3	YNL293W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	7.15	□□□□□ -1.26	not detected
MSB3	YNL293W	SAE2	P46946	345 aa		7.15	□□□□□ -1.26
MSB3	YNL293W	RPE1	P46969	238 aa		7.15	□□□□□ -1.26
MSB3	YNL293W	YGR237C	P50089	785 aa		7.15	□□□□□ -1.26
MSB3	YNL293W	TWF1	P53250	332 aa		7.15	□□□□□ -1.26
MSB3	YNL293W	YDR090C	Q03193	310 aa		7.15	□□□□□ -1.26
MSB3	YNL293W	SNX41	Q04053	625 aa		7.15	□□□□□ -1.26
MSB3	YNL293W	RTT103	Q05543	409 aa		7.15	□□□□□ -1.26
MSB3	YNL293W	COQ9	Q05779	260 aa		7.15	□□□□□ -1.26
MSB3	YNL293W	ECI1	Q05871	280 aa		7.15	□□□□□ -1.26
MSB3	YNL293W	BUR2	Q05949	395 aa		7.15	□□□□□ -1.26
MSB3	YNL293W	GPN3	Q06543	272 aa		7.15	□□□□□ -1.26
MSB3	YNL293W	CDA1	Q06702	301 aa		7.15	□□□□□ -1.26
MSB3	YNL293W	THI3	Q07471	609 aa		7.15	□□□□□ -1.26
MSB3	YNL293W	ALE1	Q08548	619 aa		7.15	□□□□□ -1.26
MSB3	YNL293W	TYW1	Q08960	810 aa	Known RBP	7.15	□□□□□ -1.26
MSB3	YNL293W	AHC1	Q12433	566 aa		7.15	□□□□□ -1.26
MSB3	YNL293W	RRP12	Q12754	1228 aa	Known RBP	7.15	□□□□□ -1.26
MSB3	YNL293W	HXK1	P04806	485 aa	Known RBP	7.15	□□□□□ -1.27
MSB3	YNL293W	LEU4	P06208	619 aa	Known RBP	7.15	□□□□□ -1.27
MSB3	YNL293W	FBP1	P09201	348 aa		7.15	□□□□□ -1.27
MSB3	YNL293W	PCK1	P10963	549 aa		7.15	□□□□□ -1.27
MSB3	YNL293W	HPR1	P17629	752 aa	Known RBP	7.15	□□□□□ -1.27
MSB3	YNL293W	YPK2	P18961	677 aa		7.15	□□□□□ -1.27
MSB3	YNL293W	FUN30	P31380	1131 aa		7.15	□□□□□ -1.27
MSB3	YNL293W	WHI3	P34761	661 aa	Known RBP	7.15	□□□□□ -1.27
MSB3	YNL293W	MSG5	P38590	489 aa		7.15	□□□□□ -1.27
MSB3	YNL293W	SRP72	P38688	640 aa	Known RBP	7.15	□□□□□ -1.27
MSB3	YNL293W	ATG7	P38862	630 aa		7.15	□□□□□ -1.27
MSB3	YNL293W	VFA1	P40080	203 aa		7.15	□□□□□ -1.27
MSB3	YNL293W	PFK26	P40433	827 aa	Known RBP	7.15	□□□□□ -1.27
MSB3	YNL293W	HER1	Q12276	1246 aa		7.15	□□□□□ -1.27
MSB3	YNL293W	TSC13	Q99190	310 aa		7.15	□□□□□ -1.27
MSB3	YNL293W	DFG16	Q99234	619 aa		7.15	□□□□□ -1.27
MSB3	YNL293W	USO1	P25386	1790 aa		7.15	□□□□□ -1.27
MSB3	YNL293W	PHO5	P00635	467 aa		7.14	□□□□□ -1.27
MSB3	YNL293W	GAL10	P04397	699 aa		7.14	□□□□□ -1.27
MSB3	YNL293W	APA1	P16550	321 aa	Known RBP	7.14	□□□□□ -1.27
MSB3	YNL293W	RGP1	P16664	663 aa		7.14	□□□□□ -1.27
MSB3	YNL293W	DBP2	P24783	546 aa	Known RBP	7.14	□□□□□ -1.27
MSB3	YNL293W	SNT1	P25357	1226 aa		7.14	□□□□□ -1.27
MSB3	YNL293W	GSH1	P32477	678 aa		7.14	□□□□□ -1.27
MSB3	YNL293W	PET309	P32522	965 aa	Predicted RBP	7.14	□□□□□ -1.27
MSB3	YNL293W	SUI1	P32911	108 aa	Known RBP	7.14	□□□□□ -1.27
MSB3	YNL293W	JEN1	P36035	616 aa		7.14	□□□□□ -1.27
MSB3	YNL293W	DUG2	P38149	878 aa		7.14	□□□□□ -1.27
MSB3	YNL293W	PCA1	P38360	1216 aa		7.14	□□□□□ -1.27
MSB3	YNL293W	STB5	P38699	743 aa		7.14	□□□□□ -1.27
MSB3	YNL293W	OSH7	P38755	437 aa		7.14	□□□□□ -1.27
MSB3	YNL293W	MIP6	P38760	659 aa	Known RBP	7.14	□□□□□ -1.27

Retrieved 100 of 5,963 RNA–protein pairs in 19 ms