RNA–Protein interactions for RNA: YNL223W

ATG4, Transcript of Conserved cysteine protease required for autophagy, yeastyeast

Gene ATG4, Length 1,485 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG4YNL223W NSP1P14907 823 aaKnown RBP5.96□□□□□ -1.46
ATG4YNL223W DCC1P25559 380 aa5.96□□□□□ -1.46
ATG4YNL223W VAC17P25591 423 aa5.96□□□□□ -1.46
ATG4YNL223W AEP1P32493 518 aa5.96□□□□□ -1.46
ATG4YNL223W IMP3P32899 183 aaPredicted RBP5.96□□□□□ -1.46
ATG4YNL223W TOM20P35180 183 aa5.96□□□□□ -1.46
ATG4YNL223W MAC1P35192 417 aa5.96□□□□□ -1.46
ATG4YNL223W ALY1P36117 915 aa5.96□□□□□ -1.46
ATG4YNL223W TFA2P36145 328 aa5.96□□□□□ -1.46
ATG4YNL223W CTP1P38152 299 aa5.96□□□□□ -1.46
ATG4YNL223W PEX28P38848 579 aa5.96□□□□□ -1.46
ATG4YNL223W MGS1P40151 587 aa5.96□□□□□ -1.46
ATG4YNL223W RGI2P40188 164 aa5.96□□□□□ -1.46
ATG4YNL223W RNR4P49723 345 aaKnown RBP5.96□□□□□ -1.46
ATG4YNL223W MRM2P53123 320 aa5.96□□□□□ -1.46
ATG4YNL223W IPI3P53877 555 aa5.96□□□□□ -1.46
ATG4YNL223W UBP2Q01476 1272 aa5.96□□□□□ -1.46
ATG4YNL223W YMR155WQ03795 547 aa5.96□□□□□ -1.46
ATG4YNL223W YDR132CQ03900 495 aa5.96□□□□□ -1.46
ATG4YNL223W CSN9Q03981 162 aa5.96□□□□□ -1.46
ATG4YNL223W RPN9Q04062 393 aaKnown RBP5.96□□□□□ -1.46
ATG4YNL223W ENT4Q07872 247 aa5.96□□□□□ -1.46
ATG4YNL223W OSW1Q08692 278 aa5.96□□□□□ -1.46
ATG4YNL223W PEX11Q12462 236 aa5.96□□□□□ -1.46
ATG4YNL223W YPR089WO13585 888 aa5.95□□□□□ -1.46
ATG4YNL223W RHO2P06781 192 aa5.95□□□□□ -1.46
ATG4YNL223W MPH2P0CD99 609 aa5.95□□□□□ -1.46
ATG4YNL223W RNA1P11745 407 aaKnown RBP5.95□□□□□ -1.46
ATG4YNL223W SCH9P11792 824 aaKnown RBP5.95□□□□□ -1.46
ATG4YNL223W SST2P11972 698 aaKnown RBP5.95□□□□□ -1.46
ATG4YNL223W AMD1P15274 810 aaKnown RBP5.95□□□□□ -1.46
ATG4YNL223W ARF2P19146 181 aaKnown RBP5.95□□□□□ -1.46
ATG4YNL223W GAL11P19659 1081 aa5.95□□□□□ -1.46
ATG4YNL223W RBK1P25332 333 aa5.95□□□□□ -1.46
ATG4YNL223W SNT1P25357 1226 aa5.95□□□□□ -1.46
ATG4YNL223W TOA1P32773 286 aa5.95□□□□□ -1.46
ATG4YNL223W TFC3P34111 1160 aa5.95□□□□□ -1.46
ATG4YNL223W CTF13P35203 478 aa5.95□□□□□ -1.46
ATG4YNL223W SPT23P35210 1082 aa5.95□□□□□ -1.46
ATG4YNL223W STN1P38960 494 aa5.95□□□□□ -1.46
ATG4YNL223W EXO1P39875 702 aa5.95□□□□□ -1.46
ATG4YNL223W HAT2P39984 401 aa5.95□□□□□ -1.46
ATG4YNL223W LSB6P42951 607 aa5.95□□□□□ -1.46
ATG4YNL223W UBP6P43593 499 aaKnown RBP5.95□□□□□ -1.46
ATG4YNL223W TEL2P53038 688 aa5.95□□□□□ -1.46
ATG4YNL223W COG1P53079 417 aa5.95□□□□□ -1.46
ATG4YNL223W YTP1P53584 459 aa5.95□□□□□ -1.46
ATG4YNL223W EAR1Q03212 550 aa5.95□□□□□ -1.46
ATG4YNL223W YDR131CQ03899 556 aa5.95□□□□□ -1.46
ATG4YNL223W SEG1Q04279 960 aa5.95□□□□□ -1.46
ATG4YNL223W TRE2Q08693 809 aa5.95□□□□□ -1.46
ATG4YNL223W YLR046CQ12253 270 aa5.95□□□□□ -1.46
ATG4YNL223W COX6P00427 148 aa5.94□□□□□ -1.46
ATG4YNL223W HSC82P15108 705 aaKnown RBP5.94□□□□□ -1.46
ATG4YNL223W DAL81P21657 970 aa5.94□□□□□ -1.46
ATG4YNL223W TRX2P22803 104 aaKnown RBP5.94□□□□□ -1.46
ATG4YNL223W GEX1P25596 615 aa5.94□□□□□ -1.46
ATG4YNL223W YCR099CP25657 155 aa5.94□□□□□ -1.46
ATG4YNL223W GUT2P32191 649 aa5.94□□□□□ -1.46
ATG4YNL223W PYC2P32327 1180 aaKnown RBP5.94□□□□□ -1.46
ATG4YNL223W BCK2P33306 851 aa5.94□□□□□ -1.46
ATG4YNL223W STE13P33894 931 aa5.94□□□□□ -1.46
ATG4YNL223W SIP2P34164 415 aaKnown RBP5.94□□□□□ -1.46
ATG4YNL223W ASK1P35734 292 aa5.94□□□□□ -1.46
ATG4YNL223W GEX2P36173 615 aa5.94□□□□□ -1.46
ATG4YNL223W VRP1P37370 817 aa5.94□□□□□ -1.46
ATG4YNL223W MAK5P38112 773 aaPredicted RBP5.94□□□□□ -1.46
ATG4YNL223W GND1P38720 489 aaKnown RBP5.94□□□□□ -1.46
ATG4YNL223W YHR131CP38835 850 aa5.94□□□□□ -1.46
ATG4YNL223W SEC31P38968 1273 aaKnown RBP5.94□□□□□ -1.46
ATG4YNL223W ECM1P39715 212 aa5.94□□□□□ -1.46
ATG4YNL223W HEM14P40012 539 aa5.94□□□□□ -1.46
ATG4YNL223W MOB1P40484 314 aa5.94□□□□□ -1.46
ATG4YNL223W RPL34BP40525 121 aaKnown RBP5.94□□□□□ -1.46
ATG4YNL223W AXL1P40851 1208 aa5.94□□□□□ -1.46
ATG4YNL223W TES1P41903 349 aaKnown RBP5.94□□□□□ -1.46
ATG4YNL223W AIF1P52923 378 aa5.94□□□□□ -1.46
ATG4YNL223W NNF2P53253 936 aa5.94□□□□□ -1.46
ATG4YNL223W SPP2Q02521 185 aa5.94□□□□□ -1.46
ATG4YNL223W PIR1Q03178 341 aa5.94□□□□□ -1.46
ATG4YNL223W NSE5Q03718 556 aa5.94□□□□□ -1.46
ATG4YNL223W HPT1Q04178 221 aaKnown RBP5.94□□□□□ -1.46
ATG4YNL223W MCP2Q06567 569 aa5.94□□□□□ -1.46
ATG4YNL223W NUS1Q12063 375 aa5.94□□□□□ -1.46
ATG4YNL223W REV1P12689 985 aa5.93□□□□□ -1.46
ATG4YNL223W PHO3P24031 467 aa5.93□□□□□ -1.46
ATG4YNL223W EMC1P25574 760 aa5.93□□□□□ -1.46
ATG4YNL223W SCD5P34758 872 aa5.93□□□□□ -1.46
ATG4YNL223W MED8P38304 223 aa5.93□□□□□ -1.46
ATG4YNL223W SRP72P38688 640 aaKnown RBP5.93□□□□□ -1.46
ATG4YNL223W MUP3P38734 546 aa5.93□□□□□ -1.46
ATG4YNL223W ACO2P39533 789 aa5.93□□□□□ -1.46
ATG4YNL223W YHB1P39676 399 aaKnown RBP5.93□□□□□ -1.46
ATG4YNL223W ALG8P40351 577 aa5.93□□□□□ -1.46
ATG4YNL223W PAN6P40459 309 aa5.93□□□□□ -1.46
ATG4YNL223W SIP4P46954 829 aa5.93□□□□□ -1.46
ATG4YNL223W CSN12P47130 423 aa5.93□□□□□ -1.46
ATG4YNL223W BOL2P53082 120 aa5.93□□□□□ -1.46
ATG4YNL223W AIM14P53109 570 aa5.93□□□□□ -1.46
ATG4YNL223W USE1P53146 245 aa5.93□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms