RNA–Protein interactions for RNA: YGR261C

APL6, Transcript of Beta3-like subunit of the yeast AP-3 complex, yeast

Gene APL6, Length 2,430 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APL6	YGR261C	MCX1	P38323	520 aa	Predicted RBP	4.99	□□□□□ -1.61
APL6	YGR261C	EGD2	P38879	174 aa	Known RBP	4.99	□□□□□ -1.61
APL6	YGR261C	ASG1	P40467	964 aa		4.99	□□□□□ -1.61
APL6	YGR261C	YGL176C	P46945	554 aa		4.99	□□□□□ -1.61
APL6	YGR261C	PNC1	P53184	216 aa	Known RBP	4.99	□□□□□ -1.61
APL6	YGR261C	SLX9	P53251	210 aa	Predicted RBP	4.99	□□□□□ -1.61
APL6	YGR261C	URH1	Q04179	340 aa		4.99	□□□□□ -1.61
APL6	YGR261C	ROY1	Q04847	553 aa		4.99	□□□□□ -1.61
APL6	YGR261C	YLL007C	Q07799	665 aa		4.99	□□□□□ -1.61
APL6	YGR261C	YEH2	Q07950	538 aa		4.99	□□□□□ -1.61
APL6	YGR261C	CWC2	Q12046	339 aa	Predicted RBP	4.99	□□□□□ -1.61
APL6	YGR261C	STE2	D6VTK4	431 aa		4.98	□□□□□ -1.61
APL6	YGR261C	SAM1	P10659	382 aa	Known RBP	4.98	□□□□□ -1.61
APL6	YGR261C	SRV2	P17555	526 aa	Known RBP	4.98	□□□□□ -1.61
APL6	YGR261C	KGD1	P20967	1014 aa	Known RBP	4.98	□□□□□ -1.61
APL6	YGR261C	YME1	P32795	747 aa		4.98	□□□□□ -1.61
APL6	YGR261C	TGL1	P34163	548 aa		4.98	□□□□□ -1.61
APL6	YGR261C	SRO77	P38163	1010 aa		4.98	□□□□□ -1.61
APL6	YGR261C	EAF5	P39995	279 aa		4.98	□□□□□ -1.61
APL6	YGR261C	THO1	P40040	218 aa	Known RBP	4.98	□□□□□ -1.61
APL6	YGR261C	YER137C	P40083	148 aa	Known RBP	4.98	□□□□□ -1.61
APL6	YGR261C	PSP1	P50896	841 aa	Known RBP	4.98	□□□□□ -1.61
APL6	YGR261C	HAP5	Q02516	242 aa		4.98	□□□□□ -1.61
APL6	YGR261C	BUD22	Q04347	519 aa	Known RBP	4.98	□□□□□ -1.61
APL6	YGR261C	DCS1	Q06151	350 aa		4.98	□□□□□ -1.61
APL6	YGR261C	PUS9	Q12069	462 aa		4.98	□□□□□ -1.61
APL6	YGR261C	HUA2	Q12134	243 aa		4.98	□□□□□ -1.61
APL6	YGR261C	PSF3	Q12146	194 aa		4.98	□□□□□ -1.61
APL6	YGR261C	ACF2	Q12168	779 aa		4.98	□□□□□ -1.61
APL6	YGR261C	TIP41	Q12199	356 aa		4.98	□□□□□ -1.61
APL6	YGR261C	SKM1	Q12469	655 aa		4.98	□□□□□ -1.61
APL6	YGR261C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.98	□□□□□ -1.61	not detected
APL6	YGR261C	RPL35A	P0CX84	120 aa	Known RBP	4.98	□□□□□ -1.61
APL6	YGR261C	RPL35B	P0CX85	120 aa	Known RBP	4.98	□□□□□ -1.61
APL6	YGR261C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.98	□□□□□ -1.61	not detected
APL6	YGR261C	ERG6	P25087	383 aa	Known RBP	4.98	□□□□□ -1.61
APL6	YGR261C	AFG1	P32317	509 aa		4.98	□□□□□ -1.61
APL6	YGR261C	IRS4	P36115	615 aa	Known RBP	4.98	□□□□□ -1.61
APL6	YGR261C	YRO2	P38079	344 aa		4.98	□□□□□ -1.61
APL6	YGR261C	SSO2	P39926	295 aa		4.98	□□□□□ -1.61
APL6	YGR261C	YER156C	P40093	338 aa	Known RBP	4.98	□□□□□ -1.61
APL6	YGR261C	MPH1	P40562	993 aa		4.98	□□□□□ -1.61
APL6	YGR261C	ERG10	P41338	398 aa	Known RBP	4.98	□□□□□ -1.61
APL6	YGR261C	ELP2	P42935	788 aa		4.98	□□□□□ -1.61
APL6	YGR261C	PPT1	P53043	513 aa		4.98	□□□□□ -1.61
APL6	YGR261C	YGR127W	P53275	312 aa		4.98	□□□□□ -1.61
APL6	YGR261C	YHM2	Q04013	314 aa		4.98	□□□□□ -1.61
APL6	YGR261C	ARG7	Q04728	441 aa		4.98	□□□□□ -1.61
APL6	YGR261C	GPN2	Q08726	347 aa	Predicted RBP	4.98	□□□□□ -1.61
APL6	YGR261C	NTO1	Q12311	748 aa		4.98	□□□□□ -1.61
APL6	YGR261C	CTF3	Q12748	733 aa		4.98	□□□□□ -1.61
APL6	YGR261C	YOS9	Q99220	542 aa		4.98	□□□□□ -1.61
APL6	YGR261C	FUS1	P11710	512 aa		4.97	□□□□□ -1.61
APL6	YGR261C	SPE2	P21182	396 aa		4.97	□□□□□ -1.61
APL6	YGR261C	VMA3	P25515	160 aa		4.97	□□□□□ -1.61
APL6	YGR261C	YKL107W	P34251	309 aa		4.97	□□□□□ -1.61
APL6	YGR261C	SIP5	P40210	489 aa	Known RBP	4.97	□□□□□ -1.61
APL6	YGR261C	YFR018C	P43599	363 aa		4.97	□□□□□ -1.61
APL6	YGR261C	AQR1	P53943	586 aa		4.97	□□□□□ -1.61
APL6	YGR261C	HMO1	Q03973	246 aa	Known RBP	4.97	□□□□□ -1.61
APL6	YGR261C	MCH5	Q08777	521 aa		4.97	□□□□□ -1.61
APL6	YGR261C	MTR10	Q99189	972 aa		4.97	□□□□□ -1.61
APL6	YGR261C	AFI1	Q99222	893 aa		4.97	□□□□□ -1.61
APL6	YGR261C	VPS63	O13549	108 aa		4.97	□□□□□ -1.61
APL6	YGR261C	PHO5	P00635	467 aa		4.97	□□□□□ -1.61
APL6	YGR261C	RAD7	P06779	565 aa		4.97	□□□□□ -1.61
APL6	YGR261C	LPD1	P09624	499 aa	Known RBP	4.97	□□□□□ -1.61
APL6	YGR261C	GLN4	P13188	809 aa	Known RBP	4.97	□□□□□ -1.61
APL6	YGR261C	SIR1	P21691	654 aa		4.97	□□□□□ -1.61
APL6	YGR261C	YCR061W	P25639	631 aa		4.97	□□□□□ -1.61
APL6	YGR261C	SCS2	P40075	244 aa	Known RBP	4.97	□□□□□ -1.61
APL6	YGR261C	PIG2	P40187	538 aa		4.97	□□□□□ -1.61
APL6	YGR261C	ICE2	P40499	491 aa		4.97	□□□□□ -1.61
APL6	YGR261C	PRM2	P40534	656 aa		4.97	□□□□□ -1.61
APL6	YGR261C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
APL6	YGR261C	ALB1	P47019	175 aa	Predicted RBP	4.97	□□□□□ -1.61
APL6	YGR261C	EMC2	P47133	292 aa	Known RBP	4.97	□□□□□ -1.61
APL6	YGR261C	MPS2	P53159	387 aa		4.97	□□□□□ -1.61
APL6	YGR261C	YNL143C	P53908	130 aa		4.97	□□□□□ -1.61
APL6	YGR261C	ATP25	Q03153	612 aa		4.97	□□□□□ -1.61
APL6	YGR261C	DFG5	Q05031	458 aa		4.97	□□□□□ -1.61
APL6	YGR261C	ERF2	Q06551	359 aa		4.97	□□□□□ -1.61
APL6	YGR261C	YFT2	Q06676	274 aa		4.97	□□□□□ -1.61
APL6	YGR261C	XYL2	Q07993	356 aa		4.97	□□□□□ -1.61
APL6	YGR261C	ATG11	Q12527	1178 aa		4.97	□□□□□ -1.61
APL6	YGR261C	YBR126W-A	Q8TGU7	68 aa		4.97	□□□□□ -1.61
APL6	YGR261C	TUS1	Q06412	1307 aa		4.97	□□□□□ -1.61
APL6	YGR261C	RPL6B	P05739	176 aa	Known RBP	4.96	□□□□□ -1.61
APL6	YGR261C	YCK1	P23291	538 aa		4.96	□□□□□ -1.61
APL6	YGR261C	GIT1	P25346	518 aa		4.96	□□□□□ -1.61
APL6	YGR261C	KIP1	P28742	1111 aa		4.96	□□□□□ -1.61
APL6	YGR261C	SIN4	P32259	974 aa		4.96	□□□□□ -1.61
APL6	YGR261C	MAE1	P36013	669 aa	Known RBP	4.96	□□□□□ -1.61
APL6	YGR261C	BMT2	P38278	337 aa		4.96	□□□□□ -1.61
APL6	YGR261C	YHR045W	P38775	560 aa		4.96	□□□□□ -1.61
APL6	YGR261C	RTT107	P38850	1070 aa		4.96	□□□□□ -1.61
APL6	YGR261C	ARC1	P46672	376 aa	Known RBP	4.96	□□□□□ -1.61
APL6	YGR261C	STB2	P46679	850 aa		4.96	□□□□□ -1.61
APL6	YGR261C	BRO1	P48582	844 aa		4.96	□□□□□ -1.61
APL6	YGR261C	LSG1	P53145	640 aa	Known RBP	4.96	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms