RNA–Protein interactions for RNA: YDR332W

IRC3, Transcript of Putative RNA helicase of the DEAH/D-box family, yeast

Gene IRC3, Length 2,070 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IRC3	YDR332W	PCL5	P38794	229 aa		3.42	□□□□□ -1.86
IRC3	YDR332W	MAM1	P40065	302 aa		3.42	□□□□□ -1.86
IRC3	YDR332W	PMT6	P42934	759 aa		3.42	□□□□□ -1.86
IRC3	YDR332W	CTR1	P49573	406 aa		3.42	□□□□□ -1.86
IRC3	YDR332W	YGL117W	P53133	265 aa		3.42	□□□□□ -1.86
IRC3	YDR332W	HRD3	Q05787	833 aa		3.42	□□□□□ -1.86
IRC3	YDR332W	BUD7	Q08754	746 aa		3.42	□□□□□ -1.86
IRC3	YDR332W	TGS1	Q12052	315 aa		3.42	□□□□□ -1.86
IRC3	YDR332W	SES1	P07284	462 aa	Known RBP	3.42	□□□□□ -1.86
IRC3	YDR332W	GPI10	P30777	616 aa		3.42	□□□□□ -1.86
IRC3	YDR332W	PDB1	P32473	366 aa	Known RBP	3.42	□□□□□ -1.86
IRC3	YDR332W	PEX5	P35056	612 aa		3.42	□□□□□ -1.86
IRC3	YDR332W	NTR2	P36118	322 aa	Predicted RBP	3.42	□□□□□ -1.86
IRC3	YDR332W	CST26	P38226	397 aa		3.42	□□□□□ -1.86
IRC3	YDR332W	APE4	P38821	490 aa		3.42	□□□□□ -1.86
IRC3	YDR332W	MSE1	P48525	536 aa		3.42	□□□□□ -1.86
IRC3	YDR332W	ADE16	P54113	591 aa	Known RBP	3.42	□□□□□ -1.86
IRC3	YDR332W	YAT1	P80235	687 aa		3.42	□□□□□ -1.86
IRC3	YDR332W	YDR109C	Q04585	715 aa		3.42	□□□□□ -1.86
IRC3	YDR332W	SWA2	Q06677	668 aa		3.42	□□□□□ -1.86
IRC3	YDR332W	YOL159C	Q08300	171 aa		3.42	□□□□□ -1.86
IRC3	YDR332W	TCO89	Q08921	799 aa		3.42	□□□□□ -1.86
IRC3	YDR332W	ARD1	P07347	238 aa	Predicted RBP	3.41	□□□□□ -1.86
IRC3	YDR332W	KGD1	P20967	1014 aa	Known RBP	3.41	□□□□□ -1.86
IRC3	YDR332W	ELM1	P32801	640 aa		3.41	□□□□□ -1.86
IRC3	YDR332W	SAS3	P34218	831 aa		3.41	□□□□□ -1.86
IRC3	YDR332W	LOT5	P34234	306 aa		3.41	□□□□□ -1.86
IRC3	YDR332W	YNG2	P38806	282 aa	Known RBP	3.41	□□□□□ -1.86
IRC3	YDR332W	SAP1	P39955	897 aa	Known RBP	3.41	□□□□□ -1.86
IRC3	YDR332W	ARG2	P40360	574 aa		3.41	□□□□□ -1.86
IRC3	YDR332W	CTK2	P46962	323 aa		3.41	□□□□□ -1.86
IRC3	YDR332W	COQ6	P53318	479 aa		3.41	□□□□□ -1.86
IRC3	YDR332W	YML037C	Q03703	340 aa		3.41	□□□□□ -1.86
IRC3	YDR332W	PSR1	Q07800	427 aa		3.41	□□□□□ -1.86
IRC3	YDR332W	WHI2	P12611	486 aa		3.4	□□□□□ -1.86
IRC3	YDR332W	APE1	P14904	514 aa		3.4	□□□□□ -1.86
IRC3	YDR332W	CDC60	P26637	1090 aa	Known RBP	3.4	□□□□□ -1.86
IRC3	YDR332W	YJU2	P28320	278 aa	Predicted RBP	3.4	□□□□□ -1.86
IRC3	YDR332W	TIF3	P34167	436 aa	Known RBP	3.4	□□□□□ -1.86
IRC3	YDR332W	PXA2	P34230	853 aa		3.4	□□□□□ -1.86
IRC3	YDR332W	GLG1	P36143	616 aa		3.4	□□□□□ -1.86
IRC3	YDR332W	AAP1	P37898	856 aa	Known RBP	3.4	□□□□□ -1.86
IRC3	YDR332W	VBA2	P38358	474 aa	Known RBP	3.4	□□□□□ -1.86
IRC3	YDR332W	CBR1	P38626	284 aa	Known RBP	3.4	□□□□□ -1.86
IRC3	YDR332W	SRP72	P38688	640 aa	Known RBP	3.4	□□□□□ -1.86
IRC3	YDR332W	MTG2	P38860	518 aa		3.4	□□□□□ -1.86
IRC3	YDR332W	LNP1	P38878	278 aa		3.4	□□□□□ -1.86
IRC3	YDR332W	SGF73	P53165	657 aa		3.4	□□□□□ -1.86
IRC3	YDR332W	RSM28	Q03430	361 aa		3.4	□□□□□ -1.86
IRC3	YDR332W	YMR206W	Q03695	313 aa		3.4	□□□□□ -1.86
IRC3	YDR332W	YDL073W	Q07454	984 aa		3.4	□□□□□ -1.86
IRC3	YDR332W	RTT109	Q07794	436 aa		3.4	□□□□□ -1.86
IRC3	YDR332W	ATG9	Q12142	997 aa		3.4	□□□□□ -1.86
IRC3	YDR332W	TAF3	Q12297	353 aa		3.4	□□□□□ -1.86
IRC3	YDR332W	ZPS1	Q12512	249 aa		3.4	□□□□□ -1.86
IRC3	YDR332W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	3.4	□□□□□ -1.87	not detected
IRC3	YDR332W	LAC1	P28496	418 aa		3.4	□□□□□ -1.87
IRC3	YDR332W	PMI40	P29952	429 aa	Known RBP	3.4	□□□□□ -1.87
IRC3	YDR332W	SYN8	P31377	255 aa		3.4	□□□□□ -1.87
IRC3	YDR332W	GCS1	P35197	352 aa		3.4	□□□□□ -1.87
IRC3	YDR332W	KES1	P35844	434 aa	Known RBP	3.4	□□□□□ -1.87
IRC3	YDR332W	RPF2	P36160	344 aa	Known RBP	3.4	□□□□□ -1.87
IRC3	YDR332W	YHL017W	P38745	532 aa		3.4	□□□□□ -1.87
IRC3	YDR332W	SEC31	P38968	1273 aa	Known RBP	3.4	□□□□□ -1.87
IRC3	YDR332W	FUN12	P39730	1002 aa	Known RBP	3.4	□□□□□ -1.87
IRC3	YDR332W	YJL068C	P40363	299 aa		3.4	□□□□□ -1.87
IRC3	YDR332W	DOT5	P40553	215 aa		3.4	□□□□□ -1.87
IRC3	YDR332W	VMA13	P41807	478 aa	Known RBP	3.4	□□□□□ -1.87
IRC3	YDR332W	YFL015C	P43578	164 aa		3.4	□□□□□ -1.87
IRC3	YDR332W	MRD1	Q06106	887 aa	Known RBP	3.4	□□□□□ -1.87
IRC3	YDR332W	LYS21	Q12122	440 aa	Known RBP	3.4	□□□□□ -1.87
IRC3	YDR332W	PET111	P08468	800 aa		3.39	□□□□□ -1.87
IRC3	YDR332W	DPH2	P32461	534 aa		3.39	□□□□□ -1.87
IRC3	YDR332W	SIP1	P32578	815 aa		3.39	□□□□□ -1.87
IRC3	YDR332W	REG2	P38232	338 aa		3.39	□□□□□ -1.87
IRC3	YDR332W	PIH1	P38768	344 aa		3.39	□□□□□ -1.87
IRC3	YDR332W	PHM8	P40025	321 aa		3.39	□□□□□ -1.87
IRC3	YDR332W	LAS21	P40367	830 aa		3.39	□□□□□ -1.87
IRC3	YDR332W	RPN11	P43588	306 aa	Known RBP	3.39	□□□□□ -1.87
IRC3	YDR332W	AVT1	P47082	602 aa		3.39	□□□□□ -1.87
IRC3	YDR332W	STR3	P53101	465 aa	Known RBP	3.39	□□□□□ -1.87
IRC3	YDR332W	BNI5	P53890	448 aa	Known RBP	3.39	□□□□□ -1.87
IRC3	YDR332W	RCF1	Q03713	159 aa		3.39	□□□□□ -1.87
IRC3	YDR332W	PLM2	Q04383	521 aa		3.39	□□□□□ -1.87
IRC3	YDR332W	LUC7	Q07508	261 aa	Predicted RBP	3.39	□□□□□ -1.87
IRC3	YDR332W	CRT10	Q08226	957 aa		3.39	□□□□□ -1.87
IRC3	YDR332W	YPL191C	Q08930	360 aa		3.39	□□□□□ -1.87
IRC3	YDR332W	STE12	P13574	688 aa		3.39	□□□□□ -1.87
IRC3	YDR332W	SNT1	P25357	1226 aa		3.39	□□□□□ -1.87
IRC3	YDR332W	DBF4	P32325	704 aa		3.39	□□□□□ -1.87
IRC3	YDR332W	GSH1	P32477	678 aa		3.39	□□□□□ -1.87
IRC3	YDR332W	WBP1	P33767	430 aa	Known RBP	3.39	□□□□□ -1.87
IRC3	YDR332W	VID24	P38263	362 aa		3.39	□□□□□ -1.87
IRC3	YDR332W	GIP4	P39732	760 aa		3.39	□□□□□ -1.87
IRC3	YDR332W	TDA10	P42938	290 aa		3.39	□□□□□ -1.87
IRC3	YDR332W	DCP2	P53550	970 aa	Known RBP	3.39	□□□□□ -1.87
IRC3	YDR332W	SUN4	P53616	420 aa		3.39	□□□□□ -1.87
IRC3	YDR332W	ERO1	Q03103	563 aa		3.39	□□□□□ -1.87
IRC3	YDR332W	WAR1	Q03631	944 aa		3.39	□□□□□ -1.87
IRC3	YDR332W	ARX1	Q03862	593 aa	Known RBP	3.39	□□□□□ -1.87

Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms