RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 GNAQP50148 359 aa15.11■□□□□ 0.01
PHGDH-220ENST00000641570 APLP1P51693 650 aa15.11■□□□□ 0.01
PHGDH-220ENST00000641570 AKAP17AQ02040 695 aaKnown RBP15.11■□□□□ 0.01
PHGDH-220ENST00000641570 SPP2Q13103 211 aa15.11■□□□□ 0.01
PHGDH-220ENST00000641570 STK3Q13188 491 aa15.11■□□□□ 0.01
PHGDH-220ENST00000641570 PABPC4Q13310 644 aaKnown RBP eCLIP15.11■□□□□ 0.01
PHGDH-220ENST00000641570 MTMR2Q13614 643 aa15.11■□□□□ 0.01
PHGDH-220ENST00000641570 SLFN13Q68D06 897 aa15.11■□□□□ 0.01
PHGDH-220ENST00000641570 RGMBQ6NW40 437 aa15.11■□□□□ 0.01
PHGDH-220ENST00000641570 GADL1Q6ZQY3 521 aa15.11■□□□□ 0.01
PHGDH-220ENST00000641570 CLEC10AQ8IUN9 316 aa15.11■□□□□ 0.01
PHGDH-220ENST00000641570 IGDCC4Q8TDY8 1250 aa15.11■□□□□ 0.01
PHGDH-220ENST00000641570 DCAF4Q8WV16 495 aa15.11■□□□□ 0.01
PHGDH-220ENST00000641570 LPAR1Q92633 364 aa15.11■□□□□ 0.01
PHGDH-220ENST00000641570 CCDC102AQ96A19 550 aa15.11■□□□□ 0.01
PHGDH-220ENST00000641570 WDR18Q9BV38 432 aa15.11■□□□□ 0.01
PHGDH-220ENST00000641570 ALDH8A1Q9H2A2 487 aaPredicted RBP15.11■□□□□ 0.01
PHGDH-220ENST00000641570 IL17RBQ9NRM6 502 aa15.11■□□□□ 0.01
PHGDH-220ENST00000641570 MYH8P13535 1937 aa15.11■□□□□ 0.01
PHGDH-220ENST00000641570 IGKV6D-41A0A0C4DH26 115 aa15.1■□□□□ 0.01
PHGDH-220ENST00000641570 GTF2A2P52657 109 aa15.1■□□□□ 0.01
PHGDH-220ENST00000641570 RCAN1P53805 252 aa15.1■□□□□ 0.01
PHGDH-220ENST00000641570 RRP1BQ14684 758 aaKnown RBP15.1■□□□□ 0.01
PHGDH-220ENST00000641570 PPP2R5BQ15173 497 aa15.1■□□□□ 0.01
PHGDH-220ENST00000641570 RTN1Q16799 776 aa15.1■□□□□ 0.01
PHGDH-220ENST00000641570 LDLRAD1Q5T700 205 aa15.1■□□□□ 0.01
PHGDH-220ENST00000641570 FASTKD5Q7L8L6 764 aaKnown RBP15.1■□□□□ 0.01
PHGDH-220ENST00000641570 SGMS1Q86VZ5 419 aa15.1■□□□□ 0.01
PHGDH-220ENST00000641570 CLMNQ96JQ2 1002 aa15.1■□□□□ 0.01
PHGDH-220ENST00000641570 TANGO6Q9C0B7 1094 aa15.1■□□□□ 0.01
PHGDH-220ENST00000641570 CREBZFQ9NS37 354 aa15.1■□□□□ 0.01
PHGDH-220ENST00000641570 TMX2Q9Y320 296 aa15.1■□□□□ 0.01
PHGDH-220ENST00000641570 TLL2Q9Y6L7 1015 aa15.1■□□□□ 0.01
PHGDH-220ENST00000641570 CXCL11O14625 94 aa15.09■□□□□ 0.01
PHGDH-220ENST00000641570 ZBTB48P10074 688 aaPredicted RBP15.09■□□□□ 0.01
PHGDH-220ENST00000641570 ECE1P42892 770 aa15.09■□□□□ 0.01
PHGDH-220ENST00000641570 BACE1P56817 501 aa15.09■□□□□ 0.01
PHGDH-220ENST00000641570 MKRN3Q13064 507 aaKnown RBP15.09■□□□□ 0.01
PHGDH-220ENST00000641570 SEC23AQ15436 765 aa15.09■□□□□ 0.01
PHGDH-220ENST00000641570 SHROOM1Q2M3G4 852 aaPredicted RBP15.09■□□□□ 0.01
PHGDH-220ENST00000641570 ASPRV1Q53RT3 343 aa15.09■□□□□ 0.01
PHGDH-220ENST00000641570 GPATCH4Q5T3I0 446 aaKnown RBP15.09■□□□□ 0.01
PHGDH-220ENST00000641570 CST9Q5W186 159 aa15.09■□□□□ 0.01
PHGDH-220ENST00000641570 SAMD1Q6SPF0 538 aaPredicted RBP15.09■□□□□ 0.01
PHGDH-220ENST00000641570 CCDC84Q86UT8 332 aaPredicted RBP15.09■□□□□ 0.01
PHGDH-220ENST00000641570 CCDC144CPQ8IYA2 1237 aa15.09■□□□□ 0.01
PHGDH-220ENST00000641570 FBXL16Q8N461 479 aa15.09■□□□□ 0.01
PHGDH-220ENST00000641570 GMCL1P1Q8NEA9 526 aa15.09■□□□□ 0.01
PHGDH-220ENST00000641570 ANKS1AQ92625 1134 aa15.09■□□□□ 0.01
PHGDH-220ENST00000641570 ZNF274Q96GC6 653 aaPredicted RBP15.09■□□□□ 0.01
PHGDH-220ENST00000641570 WNK4Q96J92 1243 aa15.09■□□□□ 0.01
PHGDH-220ENST00000641570 KIF2CQ99661 725 aa15.09■□□□□ 0.01
PHGDH-220ENST00000641570 KIAA1683Q9H0B3 1180 aa15.09■□□□□ 0.01
PHGDH-220ENST00000641570 VCPKMTQ9H867 229 aa15.09■□□□□ 0.01
PHGDH-220ENST00000641570 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.09■□□□□ 0.01
PHGDH-220ENST00000641570 KIF3AQ9Y496 699 aa15.09■□□□□ 0.01
PHGDH-220ENST00000641570 SIPA1L1O43166 1804 aa15.08■□□□□ 0.01
PHGDH-220ENST00000641570 F5H6K3 240 aa15.08■□□□□ 0
PHGDH-220ENST00000641570 WDR46O15213 610 aaKnown RBP15.08■□□□□ 0
PHGDH-220ENST00000641570 CETPP11597 493 aa15.08■□□□□ 0
PHGDH-220ENST00000641570 BMP3P12645 472 aa15.08■□□□□ 0
PHGDH-220ENST00000641570 GUCY1A2P33402 732 aa15.08■□□□□ 0
PHGDH-220ENST00000641570 HMGCS2P54868 508 aa15.08■□□□□ 0
PHGDH-220ENST00000641570 KLRC3Q07444 240 aa15.08■□□□□ 0
PHGDH-220ENST00000641570 TOB2Q14106 344 aaPredicted RBP15.08■□□□□ 0
PHGDH-220ENST00000641570 OTUD7BQ6GQQ9 843 aa15.08■□□□□ 0
PHGDH-220ENST00000641570 APOA5Q6Q788 366 aa15.08■□□□□ 0
PHGDH-220ENST00000641570 SAPCD2Q86UD0 394 aa15.08■□□□□ 0
PHGDH-220ENST00000641570 TRIM22Q8IYM9 498 aa15.08■□□□□ 0
PHGDH-220ENST00000641570 SPICE1Q8N0Z3 855 aa15.08■□□□□ 0
PHGDH-220ENST00000641570 ACER1Q8TDN7 264 aa15.08■□□□□ 0
PHGDH-220ENST00000641570 MKL1Q969V6 931 aa15.08■□□□□ 0
PHGDH-220ENST00000641570 LZTS2Q9BRK4 669 aa15.08■□□□□ 0
PHGDH-220ENST00000641570 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.08■□□□□ 0
PHGDH-220ENST00000641570 DOCK1Q14185 1865 aa15.08■□□□□ 0
PHGDH-220ENST00000641570 POLR2AP24928 1970 aaKnown RBP15.07■□□□□ 0
PHGDH-220ENST00000641570 K7ELQ4 463 aaPredicted RBP15.07■□□□□ 0
PHGDH-220ENST00000641570 NDUFB10O96000 172 aa15.07■□□□□ 0
PHGDH-220ENST00000641570 IRX3P78415 501 aaPredicted RBP15.07■□□□□ 0
PHGDH-220ENST00000641570 SREBF2Q12772 1141 aa15.07■□□□□ 0
PHGDH-220ENST00000641570 RAB11FIP4Q86YS3 637 aa15.07■□□□□ 0
PHGDH-220ENST00000641570 GMCL1Q96IK5 515 aa15.07■□□□□ 0
PHGDH-220ENST00000641570 HHIPL1Q96JK4 782 aa15.07■□□□□ 0
PHGDH-220ENST00000641570 MAP3K14Q99558 947 aa15.07■□□□□ 0
PHGDH-220ENST00000641570 LARP6Q9BRS8 491 aaKnown RBP15.07■□□□□ 0
PHGDH-220ENST00000641570 MYL10Q9BUA6 226 aa15.07■□□□□ 0
PHGDH-220ENST00000641570 SEC63Q9UGP8 760 aaKnown RBP15.07■□□□□ 0
PHGDH-220ENST00000641570 PNMA3Q9UL41 463 aa15.07■□□□□ 0
PHGDH-220ENST00000641570 AFG3L2Q9Y4W6 797 aa15.07■□□□□ 0
PHGDH-220ENST00000641570 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.07■□□□□ 0
PHGDH-220ENST00000641570 MANSC4A6NHS7 340 aaPredicted RBP15.06■□□□□ 0
PHGDH-220ENST00000641570 IRF6O14896 467 aa15.06■□□□□ 0
PHGDH-220ENST00000641570 RXRAP19793 462 aa15.06■□□□□ 0
PHGDH-220ENST00000641570 OSBPP22059 807 aa15.06■□□□□ 0
PHGDH-220ENST00000641570 STAT2P52630 851 aa15.06■□□□□ 0
PHGDH-220ENST00000641570 CCT2P78371 535 aaKnown RBP15.06■□□□□ 0
PHGDH-220ENST00000641570 DEFB115Q30KQ5 88 aa15.06■□□□□ 0
PHGDH-220ENST00000641570 RCSD1Q6JBY9 416 aa15.06■□□□□ 0
PHGDH-220ENST00000641570 FAM160B2Q86V87 743 aa15.06■□□□□ 0
PHGDH-220ENST00000641570 FANCBQ8NB91 859 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms