RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 PFASO15067 1338 aa20.18■□□□□ 0.82
PHGDH-213ENST00000641272 KIAA1755Q5JYT7 1200 aa20.17■□□□□ 0.82
PHGDH-213ENST00000641272 TRMT44Q8IYL2 757 aaKnown RBP20.17■□□□□ 0.82
PHGDH-213ENST00000641272 COL11A1P12107 1806 aaPredicted RBP20.17■□□□□ 0.82
PHGDH-213ENST00000641272 CAPN2P17655 700 aa20.16■□□□□ 0.82
PHGDH-213ENST00000641272 ATP5JP18859 108 aa20.16■□□□□ 0.82
PHGDH-213ENST00000641272 SPICE1Q8N0Z3 855 aa20.16■□□□□ 0.82
PHGDH-213ENST00000641272 HAUS7Q99871 368 aa20.16■□□□□ 0.82
PHGDH-213ENST00000641272 IVNS1ABPQ9Y6Y0 642 aa20.16■□□□□ 0.82
PHGDH-213ENST00000641272 SZT2Q5T011 3432 aa20.15■□□□□ 0.82
PHGDH-213ENST00000641272 SOX1O00570 391 aaPredicted RBP20.15■□□□□ 0.82
PHGDH-213ENST00000641272 PTPREP23469 700 aa20.15■□□□□ 0.82
PHGDH-213ENST00000641272 ICA1Q05084 483 aa20.15■□□□□ 0.82
PHGDH-213ENST00000641272 LBX2Q6XYB7 198 aa20.15■□□□□ 0.82
PHGDH-213ENST00000641272 TMEM179Q6ZVK1 233 aa20.15■□□□□ 0.82
PHGDH-213ENST00000641272 NPLOC4Q8TAT6 608 aa20.15■□□□□ 0.82
PHGDH-213ENST00000641272 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.15■□□□□ 0.821e-14■□□□□ 11
PHGDH-213ENST00000641272 SLC15A5A6NIM6 579 aa20.14■□□□□ 0.81
PHGDH-213ENST00000641272 GLRX3O76003 335 aaKnown RBP20.14■□□□□ 0.81
PHGDH-213ENST00000641272 GRB14Q14449 540 aa20.14■□□□□ 0.81
PHGDH-213ENST00000641272 TSHZ3Q63HK5 1081 aa20.14■□□□□ 0.81
PHGDH-213ENST00000641272 LRRCC1Q9C099 1032 aa20.14■□□□□ 0.81
PHGDH-213ENST00000641272 SWAP70Q9UH65 585 aa20.14■□□□□ 0.81
PHGDH-213ENST00000641272 ATP2B2Q01814 1243 aa20.13■□□□□ 0.81
PHGDH-213ENST00000641272 MFSD14CQ5VZR4 134 aa20.13■□□□□ 0.81
PHGDH-213ENST00000641272 LHX8Q68G74 356 aa20.13■□□□□ 0.81
PHGDH-213ENST00000641272 ATG4CQ96DT6 458 aa20.13■□□□□ 0.81
PHGDH-213ENST00000641272 LRCH3Q96II8 777 aa20.13■□□□□ 0.81
PHGDH-213ENST00000641272 MOV10L1Q9BXT6 1211 aaKnown RBP20.13■□□□□ 0.81
PHGDH-213ENST00000641272 ARHGEF10LQ9HCE6 1279 aa20.13■□□□□ 0.81
PHGDH-213ENST00000641272 SLC4A4Q9Y6R1 1079 aa20.13■□□□□ 0.81
PHGDH-213ENST00000641272 USP17L12C9JPN9 530 aa20.12■□□□□ 0.81
PHGDH-213ENST00000641272 USP17L21D6R901 530 aa20.12■□□□□ 0.81
PHGDH-213ENST00000641272 FLOT1O75955 427 aa20.12■□□□□ 0.81
PHGDH-213ENST00000641272 CNGA1P29973 690 aa20.12■□□□□ 0.81
PHGDH-213ENST00000641272 CYP2C19P33261 490 aa20.12■□□□□ 0.81
PHGDH-213ENST00000641272 PLS1Q14651 629 aa20.12■□□□□ 0.81
PHGDH-213ENST00000641272 PUS7LQ9H0K6 701 aaKnown RBP20.12■□□□□ 0.81
PHGDH-213ENST00000641272 CHMP4BQ9H444 224 aaKnown RBP20.12■□□□□ 0.81
PHGDH-213ENST00000641272 ATP8A2Q9NTI2 1148 aa20.12■□□□□ 0.81
PHGDH-213ENST00000641272 GREB1LQ9C091 1923 aaPredicted RBP20.12■□□□□ 0.81
PHGDH-213ENST00000641272 ADORA2AP29274 412 aa20.11■□□□□ 0.81
PHGDH-213ENST00000641272 CDK8P49336 464 aa20.11■□□□□ 0.81
PHGDH-213ENST00000641272 COG2Q14746 738 aa20.11■□□□□ 0.81
PHGDH-213ENST00000641272 AMOTL1Q8IY63 956 aa20.11■□□□□ 0.81
PHGDH-213ENST00000641272 STK11IPQ8N1F8 1099 aa20.11■□□□□ 0.81
PHGDH-213ENST00000641272 SPATC1LQ9H0A9 340 aa20.11■□□□□ 0.81
PHGDH-213ENST00000641272 RAD21O60216 631 aa20.1■□□□□ 0.81
PHGDH-213ENST00000641272 ERCC3P19447 782 aa20.1■□□□□ 0.81
PHGDH-213ENST00000641272 MAGEA10P43363 369 aaPredicted RBP20.1■□□□□ 0.81
PHGDH-213ENST00000641272 UBE3CQ15386 1083 aa20.1■□□□□ 0.81
PHGDH-213ENST00000641272 LRRC26Q2I0M4 334 aa20.1■□□□□ 0.81
PHGDH-213ENST00000641272 C12orf60Q5U649 245 aa20.1■□□□□ 0.81
PHGDH-213ENST00000641272 C16orf86Q6ZW13 317 aa20.1■□□□□ 0.81
PHGDH-213ENST00000641272 SIAH1Q8IUQ4 282 aa20.1■□□□□ 0.81
PHGDH-213ENST00000641272 TRPV1Q8NER1 839 aa20.1■□□□□ 0.81
PHGDH-213ENST00000641272 GDF15Q99988 308 aa20.1■□□□□ 0.81
PHGDH-213ENST00000641272 VCPKMTQ9H867 229 aa20.1■□□□□ 0.81
PHGDH-213ENST00000641272 COL6A1P12109 1028 aa20.09■□□□□ 0.81
PHGDH-213ENST00000641272 ANO1Q5XXA6 986 aa20.09■□□□□ 0.81
PHGDH-213ENST00000641272 DPP9Q86TI2 863 aa20.09■□□□□ 0.81
PHGDH-213ENST00000641272 DDRGK1Q96HY6 314 aa20.09■□□□□ 0.81
PHGDH-213ENST00000641272 SH2D4AQ9H788 454 aa20.09■□□□□ 0.81
PHGDH-213ENST00000641272 DDX20Q9UHI6 824 aaKnown RBP20.09■□□□□ 0.81
PHGDH-213ENST00000641272 TMX2Q9Y320 296 aa20.09■□□□□ 0.81
PHGDH-213ENST00000641272 A0A1W2PPC1 479 aa20.08■□□□□ 0.81
PHGDH-213ENST00000641272 HOXC6P09630 235 aa20.08■□□□□ 0.81
PHGDH-213ENST00000641272 DSG3P32926 999 aa20.08■□□□□ 0.81
PHGDH-213ENST00000641272 ZSCAN25Q6NSZ9 544 aa20.08■□□□□ 0.81
PHGDH-213ENST00000641272 CTR9Q6PD62 1173 aa20.08■□□□□ 0.81
PHGDH-213ENST00000641272 NCAPG2Q86XI2 1143 aa20.08■□□□□ 0.81
PHGDH-213ENST00000641272 LPAR1Q92633 364 aa20.08■□□□□ 0.81
PHGDH-213ENST00000641272 ECHDC1Q9NTX5 307 aa20.08■□□□□ 0.81
PHGDH-213ENST00000641272 FBXO28Q9NVF7 368 aa20.08■□□□□ 0.81
PHGDH-213ENST00000641272 PLXNA1Q9UIW2 1896 aa20.07■□□□□ 0.8
PHGDH-213ENST00000641272 CYBAP13498 195 aa20.07■□□□□ 0.8
PHGDH-213ENST00000641272 EEF2P13639 858 aaKnown RBP20.07■□□□□ 0.8
PHGDH-213ENST00000641272 HOXC10Q9NYD6 342 aa20.07■□□□□ 0.8
PHGDH-213ENST00000641272 MYH4Q9Y623 1939 aa20.06■□□□□ 0.8
PHGDH-213ENST00000641272 WDR46O15213 610 aaKnown RBP20.06■□□□□ 0.8
PHGDH-213ENST00000641272 COBLO75128 1261 aa20.06■□□□□ 0.8
PHGDH-213ENST00000641272 MYCNP04198 464 aaPredicted RBP20.06■□□□□ 0.8
PHGDH-213ENST00000641272 ATN1P54259 1190 aaPredicted RBP20.06■□□□□ 0.8
PHGDH-213ENST00000641272 SHCBP1Q8NEM2 672 aa20.06■□□□□ 0.8
PHGDH-213ENST00000641272 CCDC17Q96LX7 622 aa20.06■□□□□ 0.8
PHGDH-213ENST00000641272 SENP6Q9GZR1 1112 aaPredicted RBP20.06■□□□□ 0.8
PHGDH-213ENST00000641272 ARPP21Q9UBL0 812 aaPredicted RBP20.06■□□□□ 0.8
PHGDH-213ENST00000641272 LAMA3Q16787 3333 aa20.06■□□□□ 0.8
PHGDH-213ENST00000641272 LTBP2Q14767 1821 aa20.06■□□□□ 0.8
PHGDH-213ENST00000641272 ZNFX1Q9P2E3 1918 aaKnown RBP20.06■□□□□ 0.8
PHGDH-213ENST00000641272 FAM83BQ5T0W9 1011 aa20.05■□□□□ 0.8
PHGDH-213ENST00000641272 MB21D1Q8N884 522 aa20.05■□□□□ 0.8
PHGDH-213ENST00000641272 MDM2Q00987 491 aaPredicted RBP20.04■□□□□ 0.8
PHGDH-213ENST00000641272 TMEM132BQ14DG7 1078 aa20.04■□□□□ 0.8
PHGDH-213ENST00000641272 GJC2Q5T442 439 aaPredicted RBP20.04■□□□□ 0.8
PHGDH-213ENST00000641272 OSBP2Q969R2 916 aa20.04■□□□□ 0.8
PHGDH-213ENST00000641272 GPATCH3Q96I76 525 aa20.04■□□□□ 0.8
PHGDH-213ENST00000641272 STRBPQ96SI9 672 aaKnown RBP20.04■□□□□ 0.8
PHGDH-213ENST00000641272 NUP88Q99567 741 aaPredicted RBP20.04■□□□□ 0.8
PHGDH-213ENST00000641272 UBE2OQ9C0C9 1292 aaKnown RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms