RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 RPAP3Q9H6T3 665 aaPredicted RBP11.96□□□□□ -0.49
PHGDH-212ENST00000641247 GINM1Q9NU53 330 aa11.96□□□□□ -0.49
PHGDH-212ENST00000641247 TMEM39AQ9NV64 488 aa11.96□□□□□ -0.49
PHGDH-212ENST00000641247 IVNS1ABPQ9Y6Y0 642 aa11.96□□□□□ -0.49
PHGDH-212ENST00000641247 SYNGAP1Q96PV0 1343 aa11.95□□□□□ -0.5
PHGDH-212ENST00000641247 ERCC3P19447 782 aa11.95□□□□□ -0.5
PHGDH-212ENST00000641247 IRX5P78411 483 aaPredicted RBP11.95□□□□□ -0.5
PHGDH-212ENST00000641247 MVPQ14764 893 aaKnown RBP11.95□□□□□ -0.5
PHGDH-212ENST00000641247 KIAA1755Q5JYT7 1200 aa11.95□□□□□ -0.5
PHGDH-212ENST00000641247 TMEM240Q5SV17 173 aa11.95□□□□□ -0.5
PHGDH-212ENST00000641247 GAS2L1Q99501 681 aaPredicted RBP11.95□□□□□ -0.5
PHGDH-212ENST00000641247 KIAA1683Q9H0B3 1180 aa11.95□□□□□ -0.5
PHGDH-212ENST00000641247 SNRKQ9NRH2 765 aa11.95□□□□□ -0.5
PHGDH-212ENST00000641247 A0A1W2PQ45 241 aaPredicted RBP11.94□□□□□ -0.5
PHGDH-212ENST00000641247 A0A1W2PQY0 241 aa11.94□□□□□ -0.5
PHGDH-212ENST00000641247 A0A1W2PRG0 241 aa11.94□□□□□ -0.5
PHGDH-212ENST00000641247 UBTFL1P0CB47 393 aaPredicted RBP11.94□□□□□ -0.5
PHGDH-212ENST00000641247 ACRP10323 421 aa11.94□□□□□ -0.5
PHGDH-212ENST00000641247 IGFBP4P22692 258 aa11.94□□□□□ -0.5
PHGDH-212ENST00000641247 ARID4AP29374 1257 aaPredicted RBP11.94□□□□□ -0.5
PHGDH-212ENST00000641247 EVX2Q03828 476 aa11.94□□□□□ -0.5
PHGDH-212ENST00000641247 RAB3GAP1Q15042 981 aa11.94□□□□□ -0.5
PHGDH-212ENST00000641247 KHSRPQ92945 711 aaKnown RBP eCLIP11.94□□□□□ -0.5
PHGDH-212ENST00000641247 MAML3Q96JK9 1138 aa11.94□□□□□ -0.5
PHGDH-212ENST00000641247 LRP2BPQ9P2M1 347 aa11.94□□□□□ -0.5
PHGDH-212ENST00000641247 STRNO43815 780 aa11.93□□□□□ -0.5
PHGDH-212ENST00000641247 TIMP1P01033 207 aa11.93□□□□□ -0.5
PHGDH-212ENST00000641247 KCNQ1P51787 676 aa11.93□□□□□ -0.5
PHGDH-212ENST00000641247 NAA16Q6N069 864 aaPredicted RBP11.93□□□□□ -0.5
PHGDH-212ENST00000641247 CCDC129Q6ZRS4 1044 aa11.93□□□□□ -0.5
PHGDH-212ENST00000641247 ANKRD33Q7Z3H0 272 aa11.93□□□□□ -0.5
PHGDH-212ENST00000641247 SLC44A5Q8NCS7 719 aa11.93□□□□□ -0.5
PHGDH-212ENST00000641247 MEIS3Q99687 375 aa11.93□□□□□ -0.5
PHGDH-212ENST00000641247 FEZ1Q99689 392 aa11.93□□□□□ -0.5
PHGDH-212ENST00000641247 C1QTNF1Q9BXJ1 281 aa11.93□□□□□ -0.5
PHGDH-212ENST00000641247 SPATC1LQ9H0A9 340 aa11.93□□□□□ -0.5
PHGDH-212ENST00000641247 C11orf16Q9NQ32 467 aa11.93□□□□□ -0.5
PHGDH-212ENST00000641247 XPNPEP3Q9NQH7 507 aa11.93□□□□□ -0.5
PHGDH-212ENST00000641247 CXXC1Q9P0U4 656 aaPredicted RBP11.93□□□□□ -0.5
PHGDH-212ENST00000641247 TBX21Q9UL17 535 aa11.93□□□□□ -0.5
PHGDH-212ENST00000641247 YBX2Q9Y2T7 364 aaKnown RBP11.93□□□□□ -0.5
PHGDH-212ENST00000641247 ZBED9Q6R2W3 1325 aa11.92□□□□□ -0.5
PHGDH-212ENST00000641247 ZNF521Q96K83 1311 aa11.92□□□□□ -0.5
PHGDH-212ENST00000641247 ADAMTS4O75173 837 aa11.92□□□□□ -0.5
PHGDH-212ENST00000641247 BAG3O95817 575 aa11.92□□□□□ -0.5
PHGDH-212ENST00000641247 CYP2E1P05181 493 aaPredicted RBP11.92□□□□□ -0.5
PHGDH-212ENST00000641247 ZNF865P0CJ78 1059 aaPredicted RBP11.92□□□□□ -0.5
PHGDH-212ENST00000641247 CSF2RAP15509 400 aa11.92□□□□□ -0.5
PHGDH-212ENST00000641247 USP14P54578 494 aa11.92□□□□□ -0.5
PHGDH-212ENST00000641247 MFSD5Q6N075 450 aa11.92□□□□□ -0.5
PHGDH-212ENST00000641247 ZNF365Q70YC5 407 aa11.92□□□□□ -0.5
PHGDH-212ENST00000641247 CDCA7LQ96GN5 454 aa11.92□□□□□ -0.5
PHGDH-212ENST00000641247 TOX2Q96NM4 488 aa11.92□□□□□ -0.5
PHGDH-212ENST00000641247 NKX2-4Q9H2Z4 354 aa11.92□□□□□ -0.5
PHGDH-212ENST00000641247 AKAP2Q9Y2D5 859 aa11.92□□□□□ -0.5
PHGDH-212ENST00000641247 MYADML2A6NDP7 307 aa11.91□□□□□ -0.5
PHGDH-212ENST00000641247 PGK2P07205 417 aa11.91□□□□□ -0.5
PHGDH-212ENST00000641247 SHMT1P34896 483 aa11.91□□□□□ -0.5
PHGDH-212ENST00000641247 PLCD1P51178 756 aa11.91□□□□□ -0.5
PHGDH-212ENST00000641247 COG2Q14746 738 aa11.91□□□□□ -0.5
PHGDH-212ENST00000641247 CCSAPQ6IQ19 270 aaPredicted RBP11.91□□□□□ -0.5
PHGDH-212ENST00000641247 SHCBP1Q8NEM2 672 aa11.91□□□□□ -0.5
PHGDH-212ENST00000641247 TRIM34Q9BYJ4 488 aa11.91□□□□□ -0.5
PHGDH-212ENST00000641247 PIH1D3Q9NQM4 214 aaKnown RBP11.91□□□□□ -0.5
PHGDH-212ENST00000641247 RARBP10826 455 aa11.9□□□□□ -0.5
PHGDH-212ENST00000641247 MYOGP15173 224 aa11.9□□□□□ -0.5
PHGDH-212ENST00000641247 CDK7P50613 346 aa11.9□□□□□ -0.5
PHGDH-212ENST00000641247 ACLYP53396 1101 aa11.9□□□□□ -0.5
PHGDH-212ENST00000641247 SEPT2Q15019 361 aa11.9□□□□□ -0.5
PHGDH-212ENST00000641247 ABCB5Q2M3G0 1257 aa11.9□□□□□ -0.5
PHGDH-212ENST00000641247 CERKLQ49MI3 558 aaPredicted RBP11.9□□□□□ -0.5
PHGDH-212ENST00000641247 RNF180Q86T96 592 aa11.9□□□□□ -0.5
PHGDH-212ENST00000641247 ALYREFQ86V81 257 aaKnown RBP11.9□□□□□ -0.5
PHGDH-212ENST00000641247 NCAPG2Q86XI2 1143 aa11.9□□□□□ -0.5
PHGDH-212ENST00000641247 SIAH1Q8IUQ4 282 aa11.9□□□□□ -0.5
PHGDH-212ENST00000641247 KLHDC9Q8NEP7 349 aa11.9□□□□□ -0.5
PHGDH-212ENST00000641247 ARIH1Q9Y4X5 557 aaPredicted RBP11.9□□□□□ -0.5
PHGDH-212ENST00000641247 RFXAPO00287 272 aa11.89□□□□□ -0.51
PHGDH-212ENST00000641247 SRGAP3O43295 1099 aa11.89□□□□□ -0.51
PHGDH-212ENST00000641247 HLA-DOAP06340 250 aa11.89□□□□□ -0.51
PHGDH-212ENST00000641247 DSG3P32926 999 aa11.89□□□□□ -0.51
PHGDH-212ENST00000641247 RABGGTBP53611 331 aa11.89□□□□□ -0.51
PHGDH-212ENST00000641247 TMEM132BQ14DG7 1078 aa11.89□□□□□ -0.51
PHGDH-212ENST00000641247 ZNF792Q3KQV3 632 aa11.89□□□□□ -0.51
PHGDH-212ENST00000641247 GORABQ5T7V8 394 aa11.89□□□□□ -0.51
PHGDH-212ENST00000641247 MIGA1Q8NAN2 632 aa11.89□□□□□ -0.51
PHGDH-212ENST00000641247 ATG4CQ96DT6 458 aa11.89□□□□□ -0.51
PHGDH-212ENST00000641247 NOL10Q9BSC4 688 aaKnown RBP11.89□□□□□ -0.51
PHGDH-212ENST00000641247 TINF2Q9BSI4 451 aa11.89□□□□□ -0.51
PHGDH-212ENST00000641247 STARD7Q9NQZ5 370 aa11.89□□□□□ -0.51
PHGDH-212ENST00000641247 HOXC10Q9NYD6 342 aa11.89□□□□□ -0.51
PHGDH-212ENST00000641247 DCDC2CA8MYV0 355 aa11.88□□□□□ -0.51
PHGDH-212ENST00000641247 ADCY6O43306 1168 aa11.88□□□□□ -0.51
PHGDH-212ENST00000641247 PLCG2P16885 1265 aa11.88□□□□□ -0.51
PHGDH-212ENST00000641247 ZAP70P43403 619 aa11.88□□□□□ -0.51
PHGDH-212ENST00000641247 PLS1Q14651 629 aa11.88□□□□□ -0.51
PHGDH-212ENST00000641247 KCNA10Q16322 511 aa11.88□□□□□ -0.51
PHGDH-212ENST00000641247 ABRAQ8N0Z2 381 aa11.88□□□□□ -0.51
PHGDH-212ENST00000641247 MICALL1Q8N3F8 863 aa11.88□□□□□ -0.51
PHGDH-212ENST00000641247 VWCEQ96DN2 955 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms