RNA–Protein interactions for RNA: ENST00000638448.1

GYPB-216, Transcript of glycophorin B (MNS blood group), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GYPB, Length 363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-216ENST00000638448 TMEM40Q8WWA1 233 aa4.32□□□□□ -1.72
GYPB-216ENST00000638448 JARID2Q92833 1246 aaPredicted RBP4.32□□□□□ -1.72
GYPB-216ENST00000638448 MISP3Q96FF7 219 aa4.32□□□□□ -1.72
GYPB-216ENST00000638448 CBX8Q9HC52 389 aa4.32□□□□□ -1.72
GYPB-216ENST00000638448 GMIPQ9P107 970 aa4.32□□□□□ -1.72
GYPB-216ENST00000638448 ADAM30Q9UKF2 790 aa4.32□□□□□ -1.72
GYPB-216ENST00000638448 PCOLCE2Q9UKZ9 415 aa4.32□□□□□ -1.72
GYPB-216ENST00000638448 MAPK8IP1Q9UQF2 711 aa4.32□□□□□ -1.72
GYPB-216ENST00000638448 POLR3KQ9Y2Y1 108 aaPredicted RBP4.32□□□□□ -1.72
GYPB-216ENST00000638448 PCDHB14Q9Y5E9 798 aa4.32□□□□□ -1.72
GYPB-216ENST00000638448 HTR3BO95264 441 aa4.31□□□□□ -1.72
GYPB-216ENST00000638448 CEACAM5P06731 702 aa4.31□□□□□ -1.72
GYPB-216ENST00000638448 CD8BP10966 210 aa4.31□□□□□ -1.72
GYPB-216ENST00000638448 JUNBP17275 347 aaPredicted RBP4.31□□□□□ -1.72
GYPB-216ENST00000638448 ITIH2P19823 946 aa4.31□□□□□ -1.72
GYPB-216ENST00000638448 FUT4P22083 530 aa4.31□□□□□ -1.72
GYPB-216ENST00000638448 GUCY2CP25092 1073 aa4.31□□□□□ -1.72
GYPB-216ENST00000638448 NTF4P34130 210 aa4.31□□□□□ -1.72
GYPB-216ENST00000638448 CCNFP41002 786 aa4.31□□□□□ -1.72
GYPB-216ENST00000638448 OXCT1P55809 520 aa4.31□□□□□ -1.72
GYPB-216ENST00000638448 PDE4BQ07343 736 aa4.31□□□□□ -1.72
GYPB-216ENST00000638448 IFRD2Q12894 506 aaPredicted RBP4.31□□□□□ -1.72
GYPB-216ENST00000638448 IFI16Q16666 785 aaKnown RBP4.31□□□□□ -1.72
GYPB-216ENST00000638448 LONRF2Q1L5Z9 754 aa4.31□□□□□ -1.72
GYPB-216ENST00000638448 ZC3H12BQ5HYM0 836 aaKnown RBP4.31□□□□□ -1.72
GYPB-216ENST00000638448 PPM1JQ5JR12 505 aa4.31□□□□□ -1.72
GYPB-216ENST00000638448 RNF187Q5TA31 235 aaPredicted RBP4.31□□□□□ -1.72
GYPB-216ENST00000638448 CDCP2Q5VXM1 449 aa4.31□□□□□ -1.72
GYPB-216ENST00000638448 ZNF662Q6ZS27 426 aa4.31□□□□□ -1.72
GYPB-216ENST00000638448 GK5Q6ZS86 529 aa4.31□□□□□ -1.72
GYPB-216ENST00000638448 ARHGAP27Q6ZUM4 889 aa4.31□□□□□ -1.72
GYPB-216ENST00000638448 HDXQ7Z353 690 aa4.31□□□□□ -1.72
GYPB-216ENST00000638448 KIAA0907Q7Z7F0 614 aaPredicted RBP4.31□□□□□ -1.72
GYPB-216ENST00000638448 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.31□□□□□ -1.72
GYPB-216ENST00000638448 CELF2-AS1Q8N7Q2 184 aa4.31□□□□□ -1.72
GYPB-216ENST00000638448 RNF214Q8ND24 703 aa4.31□□□□□ -1.72
GYPB-216ENST00000638448 ASIC4Q96FT7 647 aa4.31□□□□□ -1.72
GYPB-216ENST00000638448 EPN3Q9H201 632 aa4.31□□□□□ -1.72
GYPB-216ENST00000638448 SSU72Q9NP77 194 aaKnown RBP4.31□□□□□ -1.72
GYPB-216ENST00000638448 TMEM260Q9NX78 707 aa4.31□□□□□ -1.72
GYPB-216ENST00000638448 ADAMTS6Q9UKP5 1117 aa4.31□□□□□ -1.72
GYPB-216ENST00000638448 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.31□□□□□ -1.72
GYPB-216ENST00000638448 CSADQ9Y600 493 aa4.31□□□□□ -1.72
GYPB-216ENST00000638448 FAM221BA6H8Z2 402 aa4.3□□□□□ -1.72
GYPB-216ENST00000638448 DCDC2CA8MYV0 355 aa4.3□□□□□ -1.72
GYPB-216ENST00000638448 TNFRSF10CO14798 259 aa4.3□□□□□ -1.72
GYPB-216ENST00000638448 CDC45O75419 566 aa4.3□□□□□ -1.72
GYPB-216ENST00000638448 PRKCQQ04759 706 aa4.3□□□□□ -1.72
GYPB-216ENST00000638448 PTPN11Q06124 597 aaPredicted RBP4.3□□□□□ -1.72
GYPB-216ENST00000638448 RING1Q06587 406 aa4.3□□□□□ -1.72
GYPB-216ENST00000638448 NCAPHQ15003 741 aa4.3□□□□□ -1.72
GYPB-216ENST00000638448 C2orf27AQ580R0 203 aa4.3□□□□□ -1.72
GYPB-216ENST00000638448 WIPI1Q5MNZ9 446 aaPredicted RBP4.3□□□□□ -1.72
GYPB-216ENST00000638448 CYFIP1Q7L576 1253 aa4.3□□□□□ -1.72
GYPB-216ENST00000638448 HOMER1Q86YM7 354 aa4.3□□□□□ -1.72
GYPB-216ENST00000638448 THAP3Q8WTV1 239 aaPredicted RBP4.3□□□□□ -1.72
GYPB-216ENST00000638448 APPBP2Q92624 585 aa4.3□□□□□ -1.72
GYPB-216ENST00000638448 PHAXQ9H814 394 aaKnown RBP4.3□□□□□ -1.72
GYPB-216ENST00000638448 RC3H2Q9HBD1 1191 aaKnown RBP4.3□□□□□ -1.72
GYPB-216ENST00000638448 PLAGL2Q9UPG8 496 aa4.3□□□□□ -1.72
GYPB-216ENST00000638448 A0A1W2PQH9 124 aa4.29□□□□□ -1.72
GYPB-216ENST00000638448 RNASE1P07998 156 aaKnown RBP4.29□□□□□ -1.72
GYPB-216ENST00000638448 AOC3Q16853 763 aa4.29□□□□□ -1.72
GYPB-216ENST00000638448 FBXW10Q5XX13 1052 aa4.29□□□□□ -1.72
GYPB-216ENST00000638448 TTC6Q86TZ1 520 aa4.29□□□□□ -1.72
GYPB-216ENST00000638448 SH3TC2Q8TF17 1288 aa4.29□□□□□ -1.72
GYPB-216ENST00000638448 PLPPR2Q96GM1 343 aa4.29□□□□□ -1.72
GYPB-216ENST00000638448 HRASLS5Q96KN8 279 aa4.29□□□□□ -1.72
GYPB-216ENST00000638448 HEXIM2Q96MH2 286 aaKnown RBP4.29□□□□□ -1.72
GYPB-216ENST00000638448 FEZ1Q99689 392 aa4.29□□□□□ -1.72
GYPB-216ENST00000638448 CNNM2Q9H8M5 875 aa4.29□□□□□ -1.72
GYPB-216ENST00000638448 MKNK2Q9HBH9 465 aa4.29□□□□□ -1.72
GYPB-216ENST00000638448 PICK1Q9NRD5 415 aa4.29□□□□□ -1.72
GYPB-216ENST00000638448 MBNL3Q9NUK0 354 aaKnown RBP4.29□□□□□ -1.72
GYPB-216ENST00000638448 VAV3Q9UKW4 847 aa4.29□□□□□ -1.72
GYPB-216ENST00000638448 PCDHA4Q9UN74 947 aa4.29□□□□□ -1.72
GYPB-216ENST00000638448 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.29□□□□□ -1.72
GYPB-216ENST00000638448 IBSPP21815 317 aaPredicted RBP4.28□□□□□ -1.72
GYPB-216ENST00000638448 CAP2P40123 477 aa4.28□□□□□ -1.72
GYPB-216ENST00000638448 ZNF143P52747 638 aaPredicted RBP4.28□□□□□ -1.72
GYPB-216ENST00000638448 PTPROQ16827 1216 aa4.28□□□□□ -1.72
GYPB-216ENST00000638448 MTERF2Q49AM1 385 aa4.28□□□□□ -1.72
GYPB-216ENST00000638448 ZBTB37Q5TC79 503 aa4.28□□□□□ -1.72
GYPB-216ENST00000638448 LRFN4Q6PJG9 635 aa4.28□□□□□ -1.72
GYPB-216ENST00000638448 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.28□□□□□ -1.72
GYPB-216ENST00000638448 C16orf86Q6ZW13 317 aa4.28□□□□□ -1.72
GYPB-216ENST00000638448 FAM214BQ7L5A3 538 aa4.28□□□□□ -1.72
GYPB-216ENST00000638448 EEPD1Q7L9B9 569 aa4.28□□□□□ -1.72
GYPB-216ENST00000638448 NLRC3Q7RTR2 1065 aa4.28□□□□□ -1.72
GYPB-216ENST00000638448 C12orf40Q86WS4 652 aa4.28□□□□□ -1.72
GYPB-216ENST00000638448 SLFN12Q8IYM2 578 aa4.28□□□□□ -1.72
GYPB-216ENST00000638448 POU5F2Q8N7G0 328 aa4.28□□□□□ -1.72
GYPB-216ENST00000638448 LRRN4CLQ8ND94 238 aa4.28□□□□□ -1.72
GYPB-216ENST00000638448 DNAJC7Q99615 494 aa4.28□□□□□ -1.72
GYPB-216ENST00000638448 SLKQ9H2G2 1235 aaPredicted RBP4.28□□□□□ -1.72
GYPB-216ENST00000638448 TNKS2Q9H2K2 1166 aa4.28□□□□□ -1.72
GYPB-216ENST00000638448 PRDM10Q9NQV6 1147 aa4.28□□□□□ -1.72
GYPB-216ENST00000638448 REV1Q9UBZ9 1251 aa4.28□□□□□ -1.72
GYPB-216ENST00000638448 NOP58Q9Y2X3 529 aaKnown RBP4.28□□□□□ -1.72
GYPB-216ENST00000638448 CARMIL2Q6F5E8 1435 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms