RNA–Protein interactions for RNA: ENST00000638249.1

KCNMA1-229, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-229ENST00000638249 TRIB2Q92519 343 aa17.71■□□□□ 0.43
KCNMA1-229ENST00000638249 RNF208Q9H0X6 261 aa17.71■□□□□ 0.43
KCNMA1-229ENST00000638249 RABGAP1Q9Y3P9 1069 aa17.71■□□□□ 0.43
KCNMA1-229ENST00000638249 SUPT16HQ9Y5B9 1047 aaKnown RBP17.71■□□□□ 0.43
KCNMA1-229ENST00000638249 GJB1P08034 283 aa17.7■□□□□ 0.42
KCNMA1-229ENST00000638249 EEF2P13639 858 aaKnown RBP17.7■□□□□ 0.42
KCNMA1-229ENST00000638249 GJA8P48165 433 aa17.7■□□□□ 0.42
KCNMA1-229ENST00000638249 TDO2P48775 406 aa17.7■□□□□ 0.42
KCNMA1-229ENST00000638249 AAMPQ13685 434 aa17.7■□□□□ 0.42
KCNMA1-229ENST00000638249 B4GALNT3Q6L9W6 998 aa17.7■□□□□ 0.42
KCNMA1-229ENST00000638249 IFNL3Q8IZI9 196 aa17.7■□□□□ 0.42
KCNMA1-229ENST00000638249 GTF3C2Q8WUA4 911 aaPredicted RBP17.7■□□□□ 0.42
KCNMA1-229ENST00000638249 USP6NLQ92738 828 aa17.7■□□□□ 0.42
KCNMA1-229ENST00000638249 VCPKMTQ9H867 229 aa17.7■□□□□ 0.42
KCNMA1-229ENST00000638249 MYH4Q9Y623 1939 aa17.7■□□□□ 0.42
KCNMA1-229ENST00000638249 PRDM1O75626 825 aa17.69■□□□□ 0.42
KCNMA1-229ENST00000638249 GNAT2P19087 354 aa17.69■□□□□ 0.42
KCNMA1-229ENST00000638249 PRPF38BQ5VTL8 546 aaKnown RBP17.69■□□□□ 0.42
KCNMA1-229ENST00000638249 U2AF1L4Q8WU68 220 aaKnown RBP17.69■□□□□ 0.42
KCNMA1-229ENST00000638249 TANGO6Q9C0B7 1094 aa17.69■□□□□ 0.42
KCNMA1-229ENST00000638249 ARHGEF10LQ9HCE6 1279 aa17.69■□□□□ 0.42
KCNMA1-229ENST00000638249 ZNF236Q9UL36 1845 aa17.69■□□□□ 0.42
KCNMA1-229ENST00000638249 PATL2C9JE40 543 aaKnown RBP17.68■□□□□ 0.42
KCNMA1-229ENST00000638249 CYP2B6P20813 491 aa17.68■□□□□ 0.42
KCNMA1-229ENST00000638249 MAPK4P31152 587 aa17.68■□□□□ 0.42
KCNMA1-229ENST00000638249 MORN1Q5T089 497 aa17.68■□□□□ 0.42
KCNMA1-229ENST00000638249 VPS53Q5VIR6 699 aa17.68■□□□□ 0.42
KCNMA1-229ENST00000638249 UBE2Q1Q7Z7E8 422 aa17.68■□□□□ 0.42
KCNMA1-229ENST00000638249 PAK6Q9NQU5 681 aaPredicted RBP17.68■□□□□ 0.42
KCNMA1-229ENST00000638249 IGKV6D-41A0A0C4DH26 115 aa17.67■□□□□ 0.42
KCNMA1-229ENST00000638249 A0A0D9SFI3 127 aa17.67■□□□□ 0.42
KCNMA1-229ENST00000638249 HMGCRP04035 888 aa17.67■□□□□ 0.42
KCNMA1-229ENST00000638249 APPP05067 770 aa17.67■□□□□ 0.42
KCNMA1-229ENST00000638249 ATP2B2Q01814 1243 aa17.67■□□□□ 0.42
KCNMA1-229ENST00000638249 CCL14Q16627 93 aa17.67■□□□□ 0.42
KCNMA1-229ENST00000638249 LRRFIP1Q32MZ4 808 aaKnown RBP17.67■□□□□ 0.42
KCNMA1-229ENST00000638249 PLEKHH3Q7Z736 793 aa17.67■□□□□ 0.42
KCNMA1-229ENST00000638249 SOCS4Q8WXH5 440 aa17.67■□□□□ 0.42
KCNMA1-229ENST00000638249 LPAR1Q92633 364 aa17.67■□□□□ 0.42
KCNMA1-229ENST00000638249 EVI5LQ96CN4 794 aa17.67■□□□□ 0.42
KCNMA1-229ENST00000638249 ATG4CQ96DT6 458 aa17.67■□□□□ 0.42
KCNMA1-229ENST00000638249 FAM227BQ96M60 508 aa17.67■□□□□ 0.42
KCNMA1-229ENST00000638249 NUDT12Q9BQG2 462 aa17.67■□□□□ 0.42
KCNMA1-229ENST00000638249 RWDD1Q9H446 243 aaPredicted RBP17.67■□□□□ 0.42
KCNMA1-229ENST00000638249 KANSL2Q9H9L4 492 aa17.67■□□□□ 0.42
KCNMA1-229ENST00000638249 ZBTB47Q9UFB7 747 aaPredicted RBP17.67■□□□□ 0.42
KCNMA1-229ENST00000638249 TACC3Q9Y6A5 838 aa17.67■□□□□ 0.42
KCNMA1-229ENST00000638249 FRMPD3Q5JV73 1810 aa17.67■□□□□ 0.42
KCNMA1-229ENST00000638249 IRX6P78412 446 aaPredicted RBP17.66■□□□□ 0.42
KCNMA1-229ENST00000638249 NUCB1Q02818 461 aa17.66■□□□□ 0.42
KCNMA1-229ENST00000638249 CHD1LQ86WJ1 897 aa17.66■□□□□ 0.42
KCNMA1-229ENST00000638249 DEFB118Q96PH6 123 aa17.66■□□□□ 0.42
KCNMA1-229ENST00000638249 FBXO28Q9NVF7 368 aa17.66■□□□□ 0.42
KCNMA1-229ENST00000638249 ALPK3Q96L96 1907 aa17.66■□□□□ 0.42
KCNMA1-229ENST00000638249 WDR46O15213 610 aaKnown RBP17.66■□□□□ 0.42
KCNMA1-229ENST00000638249 FLOT1O75955 427 aa17.66■□□□□ 0.42
KCNMA1-229ENST00000638249 SGPL1O95470 568 aa17.66■□□□□ 0.42
KCNMA1-229ENST00000638249 DSG3P32926 999 aa17.66■□□□□ 0.42
KCNMA1-229ENST00000638249 COG2Q14746 738 aa17.66■□□□□ 0.42
KCNMA1-229ENST00000638249 MAP3K21Q5TCX8 1036 aa17.66■□□□□ 0.42
KCNMA1-229ENST00000638249 PLEKHM2Q8IWE5 1019 aa17.66■□□□□ 0.42
KCNMA1-229ENST00000638249 MOV10L1Q9BXT6 1211 aaKnown RBP17.66■□□□□ 0.42
KCNMA1-229ENST00000638249 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.66■□□□□ 0.42
KCNMA1-229ENST00000638249 SH2D4AQ9H788 454 aa17.66■□□□□ 0.42
KCNMA1-229ENST00000638249 MKNK2Q9HBH9 465 aa17.66■□□□□ 0.42
KCNMA1-229ENST00000638249 PLIN4Q96Q06 1357 aa17.65■□□□□ 0.42
KCNMA1-229ENST00000638249 XRCC5P13010 732 aaKnown RBP17.65■□□□□ 0.42
KCNMA1-229ENST00000638249 PPARAQ07869 468 aa17.65■□□□□ 0.42
KCNMA1-229ENST00000638249 ZNF589Q86UQ0 364 aaPredicted RBP17.65■□□□□ 0.42
KCNMA1-229ENST00000638249 NUP88Q99567 741 aaPredicted RBP17.65■□□□□ 0.42
KCNMA1-229ENST00000638249 APBA2Q99767 749 aa17.65■□□□□ 0.42
KCNMA1-229ENST00000638249 NAPBQ9H115 298 aa17.65■□□□□ 0.42
KCNMA1-229ENST00000638249 FLRT1Q9NZU1 646 aa17.65■□□□□ 0.42
KCNMA1-229ENST00000638249 PTPREP23469 700 aa17.64■□□□□ 0.41
KCNMA1-229ENST00000638249 CCNA1P78396 465 aa17.64■□□□□ 0.41
KCNMA1-229ENST00000638249 MAP2K5Q13163 448 aa17.64■□□□□ 0.41
KCNMA1-229ENST00000638249 NMIQ13287 307 aaPredicted RBP17.64■□□□□ 0.41
KCNMA1-229ENST00000638249 GRB14Q14449 540 aa17.64■□□□□ 0.41
KCNMA1-229ENST00000638249 FAM83BQ5T0W9 1011 aa17.64■□□□□ 0.41
KCNMA1-229ENST00000638249 WDR78Q5VTH9 848 aa17.64■□□□□ 0.41
KCNMA1-229ENST00000638249 SAMD1Q6SPF0 538 aaPredicted RBP17.64■□□□□ 0.41
KCNMA1-229ENST00000638249 NKX2-3Q8TAU0 364 aa17.64■□□□□ 0.41
KCNMA1-229ENST00000638249 CEP95Q96GE4 821 aa17.64■□□□□ 0.41
KCNMA1-229ENST00000638249 SPATC1LQ9H0A9 340 aa17.64■□□□□ 0.41
KCNMA1-229ENST00000638249 CRISPLD2Q9H0B8 497 aa17.64■□□□□ 0.41
KCNMA1-229ENST00000638249 INCENPQ9NQS7 918 aa17.64■□□□□ 0.41
KCNMA1-229ENST00000638249 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.64■□□□□ 0.41
KCNMA1-229ENST00000638249 CEP290O15078 2479 aa17.64■□□□□ 0.41
KCNMA1-229ENST00000638249 PRKAR2AP13861 404 aaKnown RBP17.63■□□□□ 0.41
KCNMA1-229ENST00000638249 RGS2P41220 211 aa17.63■□□□□ 0.41
KCNMA1-229ENST00000638249 CTDSPL2Q05D32 466 aa17.63■□□□□ 0.41
KCNMA1-229ENST00000638249 CCAR1Q8IX12 1150 aaKnown RBP17.63■□□□□ 0.41
KCNMA1-229ENST00000638249 NACAP1Q9BZK3 213 aa17.63■□□□□ 0.41
KCNMA1-229ENST00000638249 HOXC10Q9NYD6 342 aa17.63■□□□□ 0.41
KCNMA1-229ENST00000638249 NYAP2Q9P242 653 aa17.63■□□□□ 0.41
KCNMA1-229ENST00000638249 RANBP2P49792 3224 aaKnown RBP17.62■□□□□ 0.41
KCNMA1-229ENST00000638249 RAD21O60216 631 aa17.62■□□□□ 0.41
KCNMA1-229ENST00000638249 FARP2O94887 1054 aaPredicted RBP17.62■□□□□ 0.41
KCNMA1-229ENST00000638249 NDUFB10O96000 172 aa17.62■□□□□ 0.41
KCNMA1-229ENST00000638249 ZKSCAN1P17029 563 aaPredicted RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms