RNA–Protein interactions for RNA: ENST00000629069.1

NCBP1-205, Transcript of nuclear cap binding protein subunit 1, human

TSL 5 BASIC

Gene NCBP1, Length 249 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCBP1-205	ENST00000629069	TTC6	Q86TZ1	520 aa		4.26	□□□□□ -1.73
NCBP1-205	ENST00000629069	TSPYL5	Q86VY4	417 aa	Predicted RBP	4.26	□□□□□ -1.73
NCBP1-205	ENST00000629069	TMEM40	Q8WWA1	233 aa		4.26	□□□□□ -1.73
NCBP1-205	ENST00000629069	KIRREL1	Q96J84	757 aa		4.26	□□□□□ -1.73
NCBP1-205	ENST00000629069	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	4.26	□□□□□ -1.73
NCBP1-205	ENST00000629069	DUSP15	Q9H1R2	295 aa	Predicted RBP	4.26	□□□□□ -1.73
NCBP1-205	ENST00000629069	EHMT1	Q9H9B1	1298 aa		4.26	□□□□□ -1.73
NCBP1-205	ENST00000629069	TMEM59L	Q9UK28	342 aa		4.26	□□□□□ -1.73
NCBP1-205	ENST00000629069	PCDHGB7	Q9Y5F8	929 aa		4.26	□□□□□ -1.73
NCBP1-205	ENST00000629069	LRRC10B	A6NIK2	292 aa		4.25	□□□□□ -1.73
NCBP1-205	ENST00000629069	WASH4P	A8MWX3	477 aa		4.25	□□□□□ -1.73
NCBP1-205	ENST00000629069	RBAK-RBAKDN	I3L0D1	243 aa		4.25	□□□□□ -1.73
NCBP1-205	ENST00000629069	SCAMP3	O14828	347 aa	Known RBP	4.25	□□□□□ -1.73
NCBP1-205	ENST00000629069	CLEC3A	O75596	197 aa		4.25	□□□□□ -1.73
NCBP1-205	ENST00000629069	UBOX5	O94941	541 aa		4.25	□□□□□ -1.73
NCBP1-205	ENST00000629069	RECK	O95980	971 aa		4.25	□□□□□ -1.73
NCBP1-205	ENST00000629069	SRF	P11831	508 aa		4.25	□□□□□ -1.73
NCBP1-205	ENST00000629069	YBX3	P16989	372 aa	Known RBP eCLIP	4.25	□□□□□ -1.73
NCBP1-205	ENST00000629069	POLR2B	P30876	1174 aa	Known RBP	4.25	□□□□□ -1.73
NCBP1-205	ENST00000629069	HK2	P52789	917 aa		4.25	□□□□□ -1.73
NCBP1-205	ENST00000629069	CLC	Q05315	142 aa		4.25	□□□□□ -1.73
NCBP1-205	ENST00000629069	RAD51AP2	Q09MP3	1159 aa		4.25	□□□□□ -1.73
NCBP1-205	ENST00000629069	TRIM26	Q12899	539 aa	Predicted RBP	4.25	□□□□□ -1.73
NCBP1-205	ENST00000629069	GAB4	Q2WGN9	574 aa		4.25	□□□□□ -1.73
NCBP1-205	ENST00000629069	CARMIL2	Q6F5E8	1435 aa		4.25	□□□□□ -1.73
NCBP1-205	ENST00000629069	SLITRK4	Q8IW52	837 aa		4.25	□□□□□ -1.73
NCBP1-205	ENST00000629069	CNNM2	Q9H8M5	875 aa		4.25	□□□□□ -1.73
NCBP1-205	ENST00000629069	FAM53C	Q9NYF3	392 aa		4.25	□□□□□ -1.73
NCBP1-205	ENST00000629069	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	4.25	□□□□□ -1.73
NCBP1-205	ENST00000629069	DNAJC25-GNG10	A0A024R161	153 aa		4.24	□□□□□ -1.73
NCBP1-205	ENST00000629069	KRTAP9-6	A0A140TA67	174 aa		4.24	□□□□□ -1.73
NCBP1-205	ENST00000629069	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	4.24	□□□□□ -1.73
NCBP1-205	ENST00000629069	GLI1	P08151	1106 aa		4.24	□□□□□ -1.73
NCBP1-205	ENST00000629069	IMPDH2	P12268	514 aa		4.24	□□□□□ -1.73
NCBP1-205	ENST00000629069	VAMP1	P23763	118 aa		4.24	□□□□□ -1.73
NCBP1-205	ENST00000629069	CCNF	P41002	786 aa		4.24	□□□□□ -1.73
NCBP1-205	ENST00000629069	NMI	Q13287	307 aa	Predicted RBP	4.24	□□□□□ -1.73
NCBP1-205	ENST00000629069	PKN1	Q16512	942 aa		4.24	□□□□□ -1.73
NCBP1-205	ENST00000629069	TMEM67	Q5HYA8	995 aa		4.24	□□□□□ -1.73
NCBP1-205	ENST00000629069	RALGPS1	Q5JS13	557 aa		4.24	□□□□□ -1.73
NCBP1-205	ENST00000629069	LDLRAD1	Q5T700	205 aa		4.24	□□□□□ -1.73
NCBP1-205	ENST00000629069	CDCP2	Q5VXM1	449 aa		4.24	□□□□□ -1.73
NCBP1-205	ENST00000629069	FBXW10	Q5XX13	1052 aa		4.24	□□□□□ -1.73
NCBP1-205	ENST00000629069	POU5F2	Q8N7G0	328 aa		4.24	□□□□□ -1.73
NCBP1-205	ENST00000629069	DHX38	Q92620	1227 aa	Known RBP	4.24	□□□□□ -1.73
NCBP1-205	ENST00000629069	ATG4C	Q96DT6	458 aa		4.24	□□□□□ -1.73
NCBP1-205	ENST00000629069	EAF1	Q96JC9	268 aa	Predicted RBP	4.24	□□□□□ -1.73
NCBP1-205	ENST00000629069	FERD3L	Q96RJ6	166 aa		4.24	□□□□□ -1.73
NCBP1-205	ENST00000629069	SLC38A3	Q99624	504 aa		4.24	□□□□□ -1.73
NCBP1-205	ENST00000629069	MKRN2	Q9H000	416 aa	Known RBP	4.24	□□□□□ -1.73
NCBP1-205	ENST00000629069	C19orf73	Q9NVV2	129 aa		4.24	□□□□□ -1.73
NCBP1-205	ENST00000629069	PCDHA11	Q9Y5I1	949 aa		4.24	□□□□□ -1.73
NCBP1-205	ENST00000629069	SSU72P8	A0A1W2PR75	194 aa		4.23	□□□□□ -1.73
NCBP1-205	ENST00000629069	SHISA3	A0PJX4	238 aa		4.23	□□□□□ -1.73
NCBP1-205	ENST00000629069	MEIS3P2	A8K0S8	358 aa		4.23	□□□□□ -1.73
NCBP1-205	ENST00000629069	FARP2	O94887	1054 aa	Predicted RBP	4.23	□□□□□ -1.73
NCBP1-205	ENST00000629069	NME1	P15531	152 aa	Known RBP	4.23	□□□□□ -1.73
NCBP1-205	ENST00000629069	DUSP4	Q13115	394 aa		4.23	□□□□□ -1.73
NCBP1-205	ENST00000629069	MLANA	Q16655	118 aa		4.23	□□□□□ -1.73
NCBP1-205	ENST00000629069	ZNF648	Q5T619	568 aa	Predicted RBP	4.23	□□□□□ -1.73
NCBP1-205	ENST00000629069	FYB2	Q5VWT5	728 aa		4.23	□□□□□ -1.73
NCBP1-205	ENST00000629069	KSR1	Q8IVT5	923 aa		4.23	□□□□□ -1.73
NCBP1-205	ENST00000629069	OXR1	Q8N573	874 aa		4.23	□□□□□ -1.73
NCBP1-205	ENST00000629069	ABHD4	Q8TB40	342 aa		4.23	□□□□□ -1.73
NCBP1-205	ENST00000629069	MYLIP	Q8WY64	445 aa		4.23	□□□□□ -1.73
NCBP1-205	ENST00000629069	ZNF512B	Q96KM6	892 aa	Predicted RBP	4.23	□□□□□ -1.73
NCBP1-205	ENST00000629069	SLC6A18	Q96N87	628 aa		4.23	□□□□□ -1.73
NCBP1-205	ENST00000629069	KRTAP4-12	Q9BQ66	201 aa		4.23	□□□□□ -1.73
NCBP1-205	ENST00000629069	ADAMTS10	Q9H324	1103 aa		4.23	□□□□□ -1.73
NCBP1-205	ENST00000629069	ANTXR1	Q9H6X2	564 aa		4.23	□□□□□ -1.73
NCBP1-205	ENST00000629069	ZNRF3	Q9ULT6	936 aa		4.23	□□□□□ -1.73
NCBP1-205	ENST00000629069	FAM86C2P	A6NEL3	165 aa		4.22	□□□□□ -1.73
NCBP1-205	ENST00000629069	TNFRSF10C	O14798	259 aa		4.22	□□□□□ -1.73
NCBP1-205	ENST00000629069	NBPF12	Q5TAG4	269 aa	Predicted RBP	4.22	□□□□□ -1.73
NCBP1-205	ENST00000629069	ZNF654	Q8IZM8	581 aa		4.22	□□□□□ -1.73
NCBP1-205	ENST00000629069	PDZD8	Q8NEN9	1154 aa		4.22	□□□□□ -1.73
NCBP1-205	ENST00000629069	ENOX1	Q8TC92	643 aa	Known RBP	4.22	□□□□□ -1.73
NCBP1-205	ENST00000629069	SYTL5	Q8TDW5	730 aa	Predicted RBP	4.22	□□□□□ -1.73
NCBP1-205	ENST00000629069	MRRF	Q96E11	262 aa	Known RBP	4.22	□□□□□ -1.73
NCBP1-205	ENST00000629069	LIN37	Q96GY3	246 aa	Predicted RBP	4.22	□□□□□ -1.73
NCBP1-205	ENST00000629069	FITM1	A5D6W6	292 aa		4.21	□□□□□ -1.74
NCBP1-205	ENST00000629069	ZNF503-AS2	A6NEH8	195 aa		4.21	□□□□□ -1.74
NCBP1-205	ENST00000629069	HPX	P02790	462 aa		4.21	□□□□□ -1.74
NCBP1-205	ENST00000629069	C8A	P07357	584 aa		4.21	□□□□□ -1.74
NCBP1-205	ENST00000629069	ZGLP1	P0C6A0	271 aa		4.21	□□□□□ -1.74
NCBP1-205	ENST00000629069	RPL10	P27635	214 aa	Known RBP	4.21	□□□□□ -1.74
NCBP1-205	ENST00000629069	PCBP3	P57721	371 aa	Known RBP	4.21	□□□□□ -1.74
NCBP1-205	ENST00000629069	ERVFC1	P60507	584 aa		4.21	□□□□□ -1.74
NCBP1-205	ENST00000629069	CHRNE	Q04844	493 aa		4.21	□□□□□ -1.74
NCBP1-205	ENST00000629069	SNW1	Q13573	536 aa	Known RBP	4.21	□□□□□ -1.74
NCBP1-205	ENST00000629069	RNF111	Q6ZNA4	994 aa		4.21	□□□□□ -1.74
NCBP1-205	ENST00000629069	TMC3	Q7Z5M5	1100 aa		4.21	□□□□□ -1.74
NCBP1-205	ENST00000629069	DAGLB	Q8NCG7	672 aa		4.21	□□□□□ -1.74
NCBP1-205	ENST00000629069	VWCE	Q96DN2	955 aa		4.21	□□□□□ -1.74
NCBP1-205	ENST00000629069	DHRS1	Q96LJ7	313 aa		4.21	□□□□□ -1.74
NCBP1-205	ENST00000629069	HDAC8	Q9BY41	377 aa		4.21	□□□□□ -1.74
NCBP1-205	ENST00000629069	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	4.21	□□□□□ -1.74
NCBP1-205	ENST00000629069	DDX41	Q9UJV9	622 aa	Known RBP	4.21	□□□□□ -1.74
NCBP1-205	ENST00000629069	FBXL21	Q9UKT6	434 aa		4.21	□□□□□ -1.74
NCBP1-205	ENST00000629069	PCDHB12	Q9Y5F1	795 aa		4.21	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 121 ms