RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 ERCC5P28715 1186 aaPredicted RBP10.88□□□□□ -0.67
CLTCL1-211ENST00000621271 XKR9Q5GH70 373 aa10.88□□□□□ -0.67
CLTCL1-211ENST00000621271 RAD51AP2Q09MP3 1159 aa10.88□□□□□ -0.67
CLTCL1-211ENST00000621271 TBC1D8BQ0IIM8 1120 aa10.88□□□□□ -0.67
CLTCL1-211ENST00000621271 KRT26Q7Z3Y9 468 aa10.88□□□□□ -0.67
CLTCL1-211ENST00000621271 NDUFB9Q9Y6M9 179 aa10.88□□□□□ -0.67
CLTCL1-211ENST00000621271 FRMPD2Q68DX3 1309 aaPredicted RBP10.88□□□□□ -0.67
CLTCL1-211ENST00000621271 KCNQ4P56696 695 aa10.88□□□□□ -0.67
CLTCL1-211ENST00000621271 RNF187Q5TA31 235 aaPredicted RBP10.88□□□□□ -0.67
CLTCL1-211ENST00000621271 IPO4Q8TEX9 1081 aaKnown RBP10.88□□□□□ -0.67
CLTCL1-211ENST00000621271 FAM227BQ96M60 508 aa10.88□□□□□ -0.67
CLTCL1-211ENST00000621271 LLPHQ9BRT6 129 aaKnown RBP10.88□□□□□ -0.67
CLTCL1-211ENST00000621271 DNAI1Q9UI46 699 aa10.88□□□□□ -0.67
CLTCL1-211ENST00000621271 AOX1Q06278 1338 aa10.88□□□□□ -0.67
CLTCL1-211ENST00000621271 CRCPO75575 148 aa10.88□□□□□ -0.67
CLTCL1-211ENST00000621271 MXRA7P84157 204 aa10.88□□□□□ -0.67
CLTCL1-211ENST00000621271 GEN1Q17RS7 908 aa10.88□□□□□ -0.67
CLTCL1-211ENST00000621271 PPP1R21Q6ZMI0 780 aa10.88□□□□□ -0.67
CLTCL1-211ENST00000621271 DYMQ7RTS9 669 aa10.88□□□□□ -0.67
CLTCL1-211ENST00000621271 SMC1BQ8NDV3 1235 aa10.88□□□□□ -0.67
CLTCL1-211ENST00000621271 MTRF1LQ9UGC7 380 aaKnown RBP10.88□□□□□ -0.67
CLTCL1-211ENST00000621271 NUB1Q9Y5A7 615 aa10.88□□□□□ -0.67
CLTCL1-211ENST00000621271 ZBTB7BO15156 539 aaPredicted RBP10.87□□□□□ -0.67
CLTCL1-211ENST00000621271 IVLP07476 585 aa10.87□□□□□ -0.67
CLTCL1-211ENST00000621271 LIG4P49917 911 aa10.87□□□□□ -0.67
CLTCL1-211ENST00000621271 MAP7D1Q3KQU3 841 aa10.87□□□□□ -0.67
CLTCL1-211ENST00000621271 PRR16Q569H4 304 aa10.87□□□□□ -0.67
CLTCL1-211ENST00000621271 GTF3C6Q969F1 213 aa10.87□□□□□ -0.67
CLTCL1-211ENST00000621271 PNMA3Q9UL41 463 aa10.87□□□□□ -0.67
CLTCL1-211ENST00000621271 ANO1Q5XXA6 986 aa10.87□□□□□ -0.67
CLTCL1-211ENST00000621271 ELMSAN1Q6PJG2 1045 aa10.87□□□□□ -0.67
CLTCL1-211ENST00000621271 CSGALNACT2Q8N6G5 542 aa10.87□□□□□ -0.67
CLTCL1-211ENST00000621271 TBC1D31Q96DN5 1066 aa10.87□□□□□ -0.67
CLTCL1-211ENST00000621271 CTNND2Q9UQB3 1225 aa10.87□□□□□ -0.67
CLTCL1-211ENST00000621271 ZBTB7AO95365 584 aa10.87□□□□□ -0.67
CLTCL1-211ENST00000621271 TNNC2P02585 160 aa10.87□□□□□ -0.67
CLTCL1-211ENST00000621271 ATP5JP18859 108 aa10.87□□□□□ -0.67
CLTCL1-211ENST00000621271 PSMC4P43686 418 aa10.87□□□□□ -0.67
CLTCL1-211ENST00000621271 MYRIPQ8NFW9 859 aa10.87□□□□□ -0.67
CLTCL1-211ENST00000621271 PPP1R9BQ96SB3 815 aa10.87□□□□□ -0.67
CLTCL1-211ENST00000621271 SWAP70Q9UH65 585 aa10.87□□□□□ -0.67
CLTCL1-211ENST00000621271 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.87□□□□□ -0.67
CLTCL1-211ENST00000621271 EFCAB6Q5THR3 1501 aa10.87□□□□□ -0.67
CLTCL1-211ENST00000621271 KDM3AQ9Y4C1 1321 aa10.87□□□□□ -0.67
CLTCL1-211ENST00000621271 KCNQ3O43525 872 aa10.87□□□□□ -0.67
CLTCL1-211ENST00000621271 CABP7Q86V35 215 aa10.87□□□□□ -0.67
CLTCL1-211ENST00000621271 ARHGEF25Q86VW2 580 aa10.87□□□□□ -0.67
CLTCL1-211ENST00000621271 TEKT3Q9BXF9 490 aa10.87□□□□□ -0.67
CLTCL1-211ENST00000621271 NCOA5Q9HCD5 579 aaKnown RBP10.87□□□□□ -0.67
CLTCL1-211ENST00000621271 TBC1D7Q9P0N9 293 aa10.87□□□□□ -0.67
CLTCL1-211ENST00000621271 SERPINA10Q9UK55 444 aa10.87□□□□□ -0.67
CLTCL1-211ENST00000621271 KCNH3Q9ULD8 1083 aa10.87□□□□□ -0.67
CLTCL1-211ENST00000621271 ARHGAP31Q2M1Z3 1444 aa10.86□□□□□ -0.67
CLTCL1-211ENST00000621271 BCRP11274 1271 aa10.86□□□□□ -0.67
CLTCL1-211ENST00000621271 KIAA1841Q6NSI8 718 aa10.86□□□□□ -0.67
CLTCL1-211ENST00000621271 SESTD1Q86VW0 696 aa10.86□□□□□ -0.67
CLTCL1-211ENST00000621271 PNMA1Q8ND90 353 aa10.86□□□□□ -0.67
CLTCL1-211ENST00000621271 ZSCAN10Q96SZ4 725 aaPredicted RBP10.86□□□□□ -0.67
CLTCL1-211ENST00000621271 GUCA1BQ9UMX6 200 aa10.86□□□□□ -0.67
CLTCL1-211ENST00000621271 TTLL3Q9Y4R7 772 aa10.86□□□□□ -0.67
CLTCL1-211ENST00000621271 ERVK-7P63135 1459 aa10.86□□□□□ -0.67
CLTCL1-211ENST00000621271 BLMP54132 1417 aaPredicted RBP10.86□□□□□ -0.67
CLTCL1-211ENST00000621271 OATP04181 439 aa10.86□□□□□ -0.67
CLTCL1-211ENST00000621271 CPA1P15085 419 aa10.86□□□□□ -0.67
CLTCL1-211ENST00000621271 POLGP54098 1239 aaPredicted RBP10.86□□□□□ -0.67
CLTCL1-211ENST00000621271 TFDP1Q14186 410 aa10.86□□□□□ -0.67
CLTCL1-211ENST00000621271 IL17REQ8NFR9 667 aa10.86□□□□□ -0.67
CLTCL1-211ENST00000621271 FBF1Q8TES7 1133 aa10.86□□□□□ -0.67
CLTCL1-211ENST00000621271 MASTLQ96GX5 879 aa10.86□□□□□ -0.67
CLTCL1-211ENST00000621271 CTAGE9A4FU28 777 aa10.86□□□□□ -0.67
CLTCL1-211ENST00000621271 CAPN9O14815 690 aa10.86□□□□□ -0.67
CLTCL1-211ENST00000621271 GIPC1O14908 333 aa10.86□□□□□ -0.67
CLTCL1-211ENST00000621271 PDE6AP16499 860 aa10.86□□□□□ -0.67
CLTCL1-211ENST00000621271 CNGA4Q8IV77 575 aa10.86□□□□□ -0.67
CLTCL1-211ENST00000621271 FBXO41Q8TF61 875 aa10.86□□□□□ -0.67
CLTCL1-211ENST00000621271 SDR42E1Q8WUS8 393 aa10.86□□□□□ -0.67
CLTCL1-211ENST00000621271 PHKBQ93100 1093 aa10.86□□□□□ -0.67
CLTCL1-211ENST00000621271 JPH2Q9BR39 696 aaPredicted RBP10.86□□□□□ -0.67
CLTCL1-211ENST00000621271 GREM2Q9H772 168 aa10.86□□□□□ -0.67
CLTCL1-211ENST00000621271 ST7Q9NRC1 585 aa10.86□□□□□ -0.67
CLTCL1-211ENST00000621271 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.86□□□□□ -0.67
CLTCL1-211ENST00000621271 PCDHB13Q9Y5F0 798 aa10.86□□□□□ -0.67
CLTCL1-211ENST00000621271 A0A1B0GVL5 298 aa10.86□□□□□ -0.67
CLTCL1-211ENST00000621271 hCG_1642624A0A1W2PR95 340 aa10.86□□□□□ -0.67
CLTCL1-211ENST00000621271 XPOTO43592 962 aaKnown RBP10.86□□□□□ -0.67
CLTCL1-211ENST00000621271 Q3C1V9 767 aa10.86□□□□□ -0.67
CLTCL1-211ENST00000621271 CCDC25Q86WR0 208 aa10.86□□□□□ -0.67
CLTCL1-211ENST00000621271 PLA2G4DQ86XP0 818 aa10.86□□□□□ -0.67
CLTCL1-211ENST00000621271 ZNF654Q8IZM8 581 aa10.86□□□□□ -0.67
CLTCL1-211ENST00000621271 TTC14Q96N46 770 aa10.86□□□□□ -0.67
CLTCL1-211ENST00000621271 MMS19Q96T76 1030 aa10.86□□□□□ -0.67
CLTCL1-211ENST00000621271 KDRP35968 1356 aa10.85□□□□□ -0.67
CLTCL1-211ENST00000621271 KLRF2D3W0D1 207 aa10.85□□□□□ -0.67
CLTCL1-211ENST00000621271 RNASELQ05823 741 aaKnown RBP10.85□□□□□ -0.67
CLTCL1-211ENST00000621271 POLA2Q14181 598 aa10.85□□□□□ -0.67
CLTCL1-211ENST00000621271 CFAP157Q5JU67 520 aa10.85□□□□□ -0.67
CLTCL1-211ENST00000621271 IFNL3Q8IZI9 196 aa10.85□□□□□ -0.67
CLTCL1-211ENST00000621271 DSCC1Q9BVC3 393 aa10.85□□□□□ -0.67
CLTCL1-211ENST00000621271 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.85□□□□□ -0.67
CLTCL1-211ENST00000621271 V9GYY5 206 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms