RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 ABCF3Q9NUQ8 709 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 RTL1A6NKG5 1358 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 PLB1Q6P1J6 1458 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 CTIFO43310 598 aaKnown RBP3.42□□□□□ -1.86
NEB-220ENST00000618972 ARL8AQ96BM9 186 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 ROCK1Q13464 1354 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 SLC8A3P57103 927 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 GCKRQ14397 625 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 LRRC8BQ6P9F7 803 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 PNKPQ96T60 521 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 CDC5LQ99459 802 aaKnown RBP3.41□□□□□ -1.86
NEB-220ENST00000618972 KCNH3Q9ULD8 1083 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 PP2D1A8MPX8 630 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 H0Y626 953 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 NCK2O43639 380 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 TRIM16O95361 564 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 LRRC31Q6UY01 552 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 GOLGA8KD6RF30 607 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 IFIT1P09914 478 aaKnown RBP3.41□□□□□ -1.86
NEB-220ENST00000618972 TMED8Q6PL24 325 aaPredicted RBP3.41□□□□□ -1.86
NEB-220ENST00000618972 SLC30A10Q6XR72 485 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 TDRD7Q8NHU6 1098 aaKnown RBP3.41□□□□□ -1.86
NEB-220ENST00000618972 EIF3CQ99613 913 aaKnown RBP3.41□□□□□ -1.86
NEB-220ENST00000618972 SEPT10Q9P0V9 454 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 HSPD1P10809 573 aaKnown RBP3.41□□□□□ -1.86
NEB-220ENST00000618972 SYNCQ9H7C4 482 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 ZBED4O75132 1171 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 EIF3BP55884 814 aaKnown RBP3.41□□□□□ -1.86
NEB-220ENST00000618972 GRM8O00222 908 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 DHX9Q08211 1270 aaKnown RBP3.41□□□□□ -1.86
NEB-220ENST00000618972 NR5A1Q13285 461 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 PPP1R12CQ9BZL4 782 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 TUBA3CQ13748 450 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 MTRF1LQ9UGC7 380 aaKnown RBP3.41□□□□□ -1.86
NEB-220ENST00000618972 PCDHB6Q9Y5E3 794 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 E7EWF7 191 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 MAPK13O15264 365 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 FAM160A1Q05DH4 1040 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 NKIRAS1Q9NYS0 192 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 CLTAP09496 248 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 ACRBPQ8NEB7 543 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 XAGE2Q96GT9 111 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 TRIM6Q9C030 488 aaPredicted RBP3.41□□□□□ -1.86
NEB-220ENST00000618972 TTF2Q9UNY4 1162 aaKnown RBP3.41□□□□□ -1.86
NEB-220ENST00000618972 UTP11Q9Y3A2 253 aaKnown RBP3.41□□□□□ -1.86
NEB-220ENST00000618972 POLR3AO14802 1390 aaPredicted RBP3.41□□□□□ -1.86
NEB-220ENST00000618972 TAL1P17542 331 aaPredicted RBP3.41□□□□□ -1.86
NEB-220ENST00000618972 SYKP43405 635 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 CNNM3Q8NE01 707 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 CDCA5Q96FF9 252 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.41□□□□□ -1.86
NEB-220ENST00000618972 KCNQ5Q9NR82 932 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 NPHP3Q7Z494 1330 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 ATP5JP18859 108 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 USP5P45974 858 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 ARID5AQ03989 594 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 ATG9AQ7Z3C6 839 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 MLKLQ8NB16 471 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 TBC1D7Q9P0N9 293 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 CHORDC1Q9UHD1 332 aaPredicted RBP3.41□□□□□ -1.86
NEB-220ENST00000618972 ADAM21Q9UKJ8 722 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 TRHP20396 242 aaPredicted RBP3.41□□□□□ -1.86
NEB-220ENST00000618972 TSHZ1Q6ZSZ6 1077 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 MXD3Q9BW11 206 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 PPARAQ07869 468 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 CNGA4Q8IV77 575 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 MAIP1Q8WWC4 291 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 RTEL1Q9NZ71 1219 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 EID1Q9Y6B2 187 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 ATP10BO94823 1461 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 CETN3O15182 167 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 PTPN12Q05209 780 aaKnown RBP3.41□□□□□ -1.86
NEB-220ENST00000618972 GRAMD1AQ96CP6 724 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 EXOC1Q9NV70 894 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 ZSWIM5Q9P217 1185 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 GCP02774 474 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 CMA1P23946 247 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 TSC22D1Q15714 1073 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 FCHSD1Q86WN1 690 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 TMEM67Q5HYA8 995 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 RRAGBQ5VZM2 374 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 TSPAN18Q96SJ8 248 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 MLXIPQ9HAP2 919 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 HGSO14964 777 aaPredicted RBP3.41□□□□□ -1.86
NEB-220ENST00000618972 KLHL23Q8NBE8 558 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 TCP11L1Q9NUJ3 509 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 VDRP11473 427 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 CXCR5P32302 372 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 MDM2Q00987 491 aaPredicted RBP3.41□□□□□ -1.86
NEB-220ENST00000618972 PSD3Q9NYI0 1048 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 KIAA1468Q9P260 1216 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 TCIRG1Q13488 830 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 PRR16Q569H4 304 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 ATP2A3Q93084 1043 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 LRRC4CQ9HCJ2 640 aa3.41□□□□□ -1.86
NEB-220ENST00000618972 CCDC151A5D8V7 595 aa3.4□□□□□ -1.86
NEB-220ENST00000618972 OAS2P29728 719 aaKnown RBP3.4□□□□□ -1.86
NEB-220ENST00000618972 CCDC13Q8IYE1 715 aa3.4□□□□□ -1.86
NEB-220ENST00000618972 MDM1Q8TC05 714 aa3.4□□□□□ -1.86
NEB-220ENST00000618972 EFHD1Q9BUP0 239 aa3.4□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms