RNA–Protein interactions for RNA: ENST00000617771.5

VEGFA-228, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-228ENST00000617771 PLEKHH3Q7Z736 793 aa30.15■■■□□ 2.42
VEGFA-228ENST00000617771 SIAH1Q8IUQ4 282 aa30.15■■■□□ 2.42
VEGFA-228ENST00000617771 U2AF1L4Q8WU68 220 aaKnown RBP30.15■■■□□ 2.42
VEGFA-228ENST00000617771 NACAP1Q9BZK3 213 aa30.15■■■□□ 2.42
VEGFA-228ENST00000617771 VCPKMTQ9H867 229 aa30.15■■■□□ 2.42
VEGFA-228ENST00000617771 MKNK2Q9HBH9 465 aa30.15■■■□□ 2.42
VEGFA-228ENST00000617771 HOXC10Q9NYD6 342 aa30.15■■■□□ 2.42
VEGFA-228ENST00000617771 STAP2Q9UGK3 403 aa30.15■■■□□ 2.42
VEGFA-228ENST00000617771 DOCK3Q8IZD9 2030 aa30.15■■■□□ 2.42
VEGFA-228ENST00000617771 ROBO3Q96MS0 1386 aa30.15■■■□□ 2.42
VEGFA-228ENST00000617771 CAPN2P17655 700 aa30.14■■■□□ 2.42
VEGFA-228ENST00000617771 CYP2B6P20813 491 aa30.14■■■□□ 2.42
VEGFA-228ENST00000617771 ZMYM1Q5SVZ6 1142 aa30.14■■■□□ 2.42
VEGFA-228ENST00000617771 EPB41L4AQ9HCS5 686 aaPredicted RBP30.14■■■□□ 2.42
VEGFA-228ENST00000617771 MKI67P46013 3256 aaKnown RBP30.14■■■□□ 2.41
VEGFA-228ENST00000617771 SGPL1O95470 568 aa30.13■■■□□ 2.41
VEGFA-228ENST00000617771 XRCC5P13010 732 aaKnown RBP30.13■■■□□ 2.41
VEGFA-228ENST00000617771 PDE1AP54750 535 aa30.13■■■□□ 2.41
VEGFA-228ENST00000617771 ATP2B2Q01814 1243 aa30.13■■■□□ 2.41
VEGFA-228ENST00000617771 SEC62Q99442 399 aaKnown RBP30.13■■■□□ 2.41
VEGFA-228ENST00000617771 ZNF287Q9HBT7 754 aa30.13■■■□□ 2.41
VEGFA-228ENST00000617771 EEF2P13639 858 aaKnown RBP30.12■■■□□ 2.41
VEGFA-228ENST00000617771 TRMT44Q8IYL2 757 aaKnown RBP30.12■■■□□ 2.41
VEGFA-228ENST00000617771 IFNL3Q8IZI9 196 aa30.12■■■□□ 2.41
VEGFA-228ENST00000617771 EVI5LQ96CN4 794 aa30.12■■■□□ 2.41
VEGFA-228ENST00000617771 PAK6Q9NQU5 681 aaPredicted RBP30.12■■■□□ 2.41
VEGFA-228ENST00000617771 BTBD7Q9P203 1132 aa30.12■■■□□ 2.41
VEGFA-228ENST00000617771 RGS2P41220 211 aa30.11■■■□□ 2.41
VEGFA-228ENST00000617771 KIAA1755Q5JYT7 1200 aa30.11■■■□□ 2.41
VEGFA-228ENST00000617771 SPICE1Q8N0Z3 855 aa30.11■■■□□ 2.41
VEGFA-228ENST00000617771 STK11IPQ8N1F8 1099 aa30.11■■■□□ 2.41
VEGFA-228ENST00000617771 PLXNB2O15031 1838 aa30.1■■■□□ 2.41
VEGFA-228ENST00000617771 WDR46O15213 610 aaKnown RBP30.1■■■□□ 2.41
VEGFA-228ENST00000617771 RASA1P20936 1047 aa30.1■■■□□ 2.41
VEGFA-228ENST00000617771 MORN1Q5T089 497 aa30.1■■■□□ 2.41
VEGFA-228ENST00000617771 WDR78Q5VTH9 848 aa30.1■■■□□ 2.41
VEGFA-228ENST00000617771 TRIB2Q92519 343 aa30.1■■■□□ 2.41
VEGFA-228ENST00000617771 USP6NLQ92738 828 aa30.1■■■□□ 2.41
VEGFA-228ENST00000617771 DEFB118Q96PH6 123 aa30.1■■■□□ 2.41
VEGFA-228ENST00000617771 GOPCQ9HD26 462 aa30.1■■■□□ 2.41
VEGFA-228ENST00000617771 SMC5Q8IY18 1101 aa30.09■■■□□ 2.41
VEGFA-228ENST00000617771 MB21D1Q8N884 522 aa30.09■■■□□ 2.41
VEGFA-228ENST00000617771 EXOC6Q8TAG9 804 aa30.09■■■□□ 2.41
VEGFA-228ENST00000617771 LNPKQ9C0E8 428 aa30.09■■■□□ 2.41
VEGFA-228ENST00000617771 XRN2Q9H0D6 950 aaKnown RBP eCLIP30.09■■■□□ 2.413e-7■■■■□ 25.4
VEGFA-228ENST00000617771 RPTORQ8N122 1335 aa30.08■■■□□ 2.41
VEGFA-228ENST00000617771 FLOT1O75955 427 aa30.08■■■□□ 2.41
VEGFA-228ENST00000617771 TFRCP02786 760 aaKnown RBP30.08■■■□□ 2.41
VEGFA-228ENST00000617771 ZKSCAN1P17029 563 aaPredicted RBP30.08■■■□□ 2.41
VEGFA-228ENST00000617771 DSG3P32926 999 aa30.08■■■□□ 2.41
VEGFA-228ENST00000617771 APBA2Q99767 749 aa30.08■■■□□ 2.41
VEGFA-228ENST00000617771 NAPBQ9H115 298 aa30.08■■■□□ 2.41
VEGFA-228ENST00000617771 HMX1Q9NP08 348 aaPredicted RBP30.08■■■□□ 2.41
VEGFA-228ENST00000617771 IVNS1ABPQ9Y6Y0 642 aa30.08■■■□□ 2.41
VEGFA-228ENST00000617771 ZNF444Q8N0Y2 327 aaPredicted RBP30.07■■■□□ 2.4
VEGFA-228ENST00000617771 GNL3Q9BVP2 549 aaKnown RBP eCLIP30.07■■■□□ 2.4
VEGFA-228ENST00000617771 SLC15A5A6NIM6 579 aa30.06■■■□□ 2.4
VEGFA-228ENST00000617771 FARP2O94887 1054 aaPredicted RBP30.06■■■□□ 2.4
VEGFA-228ENST00000617771 SLC3A2P08195 630 aaKnown RBP30.06■■■□□ 2.4
VEGFA-228ENST00000617771 TRIM32Q13049 653 aa30.06■■■□□ 2.4
VEGFA-228ENST00000617771 MAP2K5Q13163 448 aa30.06■■■□□ 2.4
VEGFA-228ENST00000617771 PTPREP23469 700 aa30.05■■■□□ 2.4
VEGFA-228ENST00000617771 PDE4BQ07343 736 aa30.05■■■□□ 2.4
VEGFA-228ENST00000617771 B4GALNT3Q6L9W6 998 aa30.05■■■□□ 2.4
VEGFA-228ENST00000617771 UBE2Q1Q7Z7E8 422 aa30.05■■■□□ 2.4
VEGFA-228ENST00000617771 TICAM2Q86XR7 235 aa30.05■■■□□ 2.4
VEGFA-228ENST00000617771 SPATC1LQ9H0A9 340 aa30.05■■■□□ 2.4
VEGFA-228ENST00000617771 NYAP2Q9P242 653 aa30.05■■■□□ 2.4
VEGFA-228ENST00000617771 RAD21O60216 631 aa30.04■■■□□ 2.4
VEGFA-228ENST00000617771 CRISPLD2Q9H0B8 497 aa30.04■■■□□ 2.4
VEGFA-228ENST00000617771 GREB1LQ9C091 1923 aaPredicted RBP30.03■■■□□ 2.4
VEGFA-228ENST00000617771 PRDM1O75626 825 aa30.03■■■□□ 2.4
VEGFA-228ENST00000617771 PRKAR2AP13861 404 aaKnown RBP30.03■■■□□ 2.4
VEGFA-228ENST00000617771 MAP3K21Q5TCX8 1036 aa30.03■■■□□ 2.4
VEGFA-228ENST00000617771 SAMD1Q6SPF0 538 aaPredicted RBP30.03■■■□□ 2.4
VEGFA-228ENST00000617771 SHCBP1Q8NEM2 672 aa30.03■■■□□ 2.4
VEGFA-228ENST00000617771 ATG4CQ96DT6 458 aa30.03■■■□□ 2.4
VEGFA-228ENST00000617771 HTATIP2Q9BUP3 242 aa30.03■■■□□ 2.4
VEGFA-228ENST00000617771 MOV10L1Q9BXT6 1211 aaKnown RBP30.03■■■□□ 2.4
VEGFA-228ENST00000617771 HELLSQ9NRZ9 838 aa30.03■■■□□ 2.4
VEGFA-228ENST00000617771 SUPT16HQ9Y5B9 1047 aaKnown RBP30.03■■■□□ 2.4
VEGFA-228ENST00000617771 A0A0G2JMZ2 1700 aa30.02■■■□□ 2.4
VEGFA-228ENST00000617771 IGHDP01880 384 aa30.02■■■□□ 2.4
VEGFA-228ENST00000617771 PPARAQ07869 468 aa30.02■■■□□ 2.4
VEGFA-228ENST00000617771 GRB14Q14449 540 aa30.02■■■□□ 2.4
VEGFA-228ENST00000617771 CCDC129Q6ZRS4 1044 aa30.02■■■□□ 2.4
VEGFA-228ENST00000617771 CHD1LQ86WJ1 897 aa30.02■■■□□ 2.4
VEGFA-228ENST00000617771 PLS1Q14651 629 aa30.01■■■□□ 2.39
VEGFA-228ENST00000617771 CCL14Q16627 93 aa30.01■■■□□ 2.39
VEGFA-228ENST00000617771 RLFQ13129 1914 aa30■■■□□ 2.39
VEGFA-228ENST00000617771 IGKV6D-41A0A0C4DH26 115 aa30■■■□□ 2.39
VEGFA-228ENST00000617771 TRIM6-TRIM34B2RNG4 842 aa30■■■□□ 2.39
VEGFA-228ENST00000617771 NUCB1Q02818 461 aa30■■■□□ 2.39
VEGFA-228ENST00000617771 DPF3Q92784 378 aa30■■■□□ 2.39
VEGFA-228ENST00000617771 CLIP2Q9UDT6 1046 aa30■■■□□ 2.39
VEGFA-228ENST00000617771 STRNO43815 780 aa29.99■■■□□ 2.39
VEGFA-228ENST00000617771 HOXC6P09630 235 aa29.99■■■□□ 2.39
VEGFA-228ENST00000617771 TSPY3P0CV98 308 aa29.99■■■□□ 2.39
VEGFA-228ENST00000617771 TSPY8P0CW00 308 aa29.99■■■□□ 2.39
VEGFA-228ENST00000617771 ERCC3P19447 782 aa29.99■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms