RNA–Protein interactions for RNA: ENST00000617767.4

CPNE4-214, Transcript of copine 4, humanhuman

TSL 2 BASIC

Gene CPNE4, Length 3,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-214ENST00000617767 SKIDA1Q1XH10 827 aa6.31□□□□□ -1.4
CPNE4-214ENST00000617767 HHATQ5VTY9 493 aa6.31□□□□□ -1.4
CPNE4-214ENST00000617767 TMCO3Q6UWJ1 677 aa6.31□□□□□ -1.4
CPNE4-214ENST00000617767 MFSD6Q6ZSS7 791 aa6.31□□□□□ -1.4
CPNE4-214ENST00000617767 CNBD1Q8NA66 436 aa6.31□□□□□ -1.4
CPNE4-214ENST00000617767 LEO1Q8WVC0 666 aaPredicted RBP6.31□□□□□ -1.4
CPNE4-214ENST00000617767 IL17RAQ96F46 866 aa6.31□□□□□ -1.4
CPNE4-214ENST00000617767 C8orf76Q96K31 380 aa6.31□□□□□ -1.4
CPNE4-214ENST00000617767 YIPF2Q9BWQ6 316 aa6.31□□□□□ -1.4
CPNE4-214ENST00000617767 SLC26A6Q9BXS9 759 aa6.31□□□□□ -1.4
CPNE4-214ENST00000617767 LMCD1Q9NZU5 365 aa6.31□□□□□ -1.4
CPNE4-214ENST00000617767 WNK3Q9BYP7 1800 aa6.31□□□□□ -1.4
CPNE4-214ENST00000617767 BTAF1O14981 1849 aa6.31□□□□□ -1.4
CPNE4-214ENST00000617767 RBM47A0AV96 593 aaKnown RBP6.31□□□□□ -1.4
CPNE4-214ENST00000617767 KIF2AO00139 706 aaPredicted RBP6.31□□□□□ -1.4
CPNE4-214ENST00000617767 AP5Z1O43299 807 aa6.31□□□□□ -1.4
CPNE4-214ENST00000617767 SLU7O95391 586 aaKnown RBP6.31□□□□□ -1.4
CPNE4-214ENST00000617767 LIG3P49916 1009 aa6.31□□□□□ -1.4
CPNE4-214ENST00000617767 USP4Q13107 963 aa6.31□□□□□ -1.4
CPNE4-214ENST00000617767 SPECC1Q5M775 1068 aa6.31□□□□□ -1.4
CPNE4-214ENST00000617767 NAA16Q6N069 864 aaPredicted RBP6.31□□□□□ -1.4
CPNE4-214ENST00000617767 FNBP4Q8N3X1 1017 aaPredicted RBP6.31□□□□□ -1.4
CPNE4-214ENST00000617767 SYAP1Q96A49 352 aaPredicted RBP6.31□□□□□ -1.4
CPNE4-214ENST00000617767 EXOC4Q96A65 974 aa6.31□□□□□ -1.4
CPNE4-214ENST00000617767 PGBD1Q96JS3 809 aa6.31□□□□□ -1.4
CPNE4-214ENST00000617767 COL22A1Q8NFW1 1626 aaPredicted RBP6.3□□□□□ -1.4
CPNE4-214ENST00000617767 CARMIL3Q8ND23 1372 aa6.3□□□□□ -1.4
CPNE4-214ENST00000617767 DDX60Q8IY21 1712 aaKnown RBP6.3□□□□□ -1.4
CPNE4-214ENST00000617767 A0A087WUV0 522 aaPredicted RBP6.3□□□□□ -1.4
CPNE4-214ENST00000617767 MAGEB6P1A0A0J9YX57 407 aa6.3□□□□□ -1.4
CPNE4-214ENST00000617767 ERLIN2O94905 339 aa6.3□□□□□ -1.4
CPNE4-214ENST00000617767 SETSIPP0DME0 302 aa6.3□□□□□ -1.4
CPNE4-214ENST00000617767 ATP2B2Q01814 1243 aa6.3□□□□□ -1.4
CPNE4-214ENST00000617767 SMC1AQ14683 1233 aaKnown RBP6.3□□□□□ -1.4
CPNE4-214ENST00000617767 KIRREL3Q8IZU9 778 aa6.3□□□□□ -1.4
CPNE4-214ENST00000617767 CERKQ8TCT0 537 aa6.3□□□□□ -1.4
CPNE4-214ENST00000617767 CRACR2AQ9BSW2 395 aa6.3□□□□□ -1.4
CPNE4-214ENST00000617767 SAP30BPQ9UHR5 308 aaKnown RBP6.3□□□□□ -1.4
CPNE4-214ENST00000617767 BLOC1S6Q9UL45 172 aa6.3□□□□□ -1.4
CPNE4-214ENST00000617767 KCNJ14Q9UNX9 436 aa6.3□□□□□ -1.4
CPNE4-214ENST00000617767 HPS5Q9UPZ3 1129 aa6.3□□□□□ -1.4
CPNE4-214ENST00000617767 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.3□□□□□ -1.4
CPNE4-214ENST00000617767 A0A1B0GVL5 298 aa6.3□□□□□ -1.4
CPNE4-214ENST00000617767 CCDC69A6NI79 296 aa6.3□□□□□ -1.4
CPNE4-214ENST00000617767 GOLGA8AA7E2F4 631 aa6.3□□□□□ -1.4
CPNE4-214ENST00000617767 KIF28PB7ZC32 967 aa6.3□□□□□ -1.4
CPNE4-214ENST00000617767 GUCY1A2P33402 732 aa6.3□□□□□ -1.4
CPNE4-214ENST00000617767 MAGEA8P43361 318 aa6.3□□□□□ -1.4
CPNE4-214ENST00000617767 CD151P48509 253 aa6.3□□□□□ -1.4
CPNE4-214ENST00000617767 UBE3CQ15386 1083 aa6.3□□□□□ -1.4
CPNE4-214ENST00000617767 CCDC183Q5T5S1 534 aa6.3□□□□□ -1.4
CPNE4-214ENST00000617767 GET4Q7L5D6 327 aaPredicted RBP6.3□□□□□ -1.4
CPNE4-214ENST00000617767 EXOC8Q8IYI6 725 aa6.3□□□□□ -1.4
CPNE4-214ENST00000617767 C3orf20Q8ND61 904 aa6.3□□□□□ -1.4
CPNE4-214ENST00000617767 ZNF384Q8TF68 577 aa6.3□□□□□ -1.4
CPNE4-214ENST00000617767 STAG1Q8WVM7 1258 aa6.3□□□□□ -1.4
CPNE4-214ENST00000617767 MCM8Q9UJA3 840 aa6.3□□□□□ -1.4
CPNE4-214ENST00000617767 SLC12A7Q9Y666 1083 aa6.3□□□□□ -1.4
CPNE4-214ENST00000617767 CLIC4Q9Y696 253 aa6.3□□□□□ -1.4
CPNE4-214ENST00000617767 USP17L12C9JPN9 530 aa6.29□□□□□ -1.4
CPNE4-214ENST00000617767 USP17L21D6R901 530 aa6.29□□□□□ -1.4
CPNE4-214ENST00000617767 C6orf229H3BNL8 230 aa6.29□□□□□ -1.4
CPNE4-214ENST00000617767 ZRANB2O95218 330 aaKnown RBP eCLIP6.29□□□□□ -1.4
CPNE4-214ENST00000617767 HIBADHP31937 336 aaKnown RBP6.29□□□□□ -1.4
CPNE4-214ENST00000617767 MECOMQ03112 1051 aa6.29□□□□□ -1.4
CPNE4-214ENST00000617767 RESTQ13127 1097 aa6.29□□□□□ -1.4
CPNE4-214ENST00000617767 ARHGAP29Q52LW3 1261 aa6.29□□□□□ -1.4
CPNE4-214ENST00000617767 LUZP1Q86V48 1076 aa6.29□□□□□ -1.4
CPNE4-214ENST00000617767 DZIP1Q86YF9 867 aaKnown RBP6.29□□□□□ -1.4
CPNE4-214ENST00000617767 LRRN4CLQ8ND94 238 aa6.29□□□□□ -1.4
CPNE4-214ENST00000617767 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.29□□□□□ -1.4
CPNE4-214ENST00000617767 RPGRQ92834 1020 aaKnown RBP6.29□□□□□ -1.4
CPNE4-214ENST00000617767 TNMDQ9H2S6 317 aa6.29□□□□□ -1.4
CPNE4-214ENST00000617767 ANGEL1Q9UNK9 670 aaKnown RBP6.29□□□□□ -1.4
CPNE4-214ENST00000617767 MRFAP1Q9Y605 127 aa6.29□□□□□ -1.4
CPNE4-214ENST00000617767 COL1A1P02452 1464 aaPredicted RBP6.29□□□□□ -1.4
CPNE4-214ENST00000617767 BIN1O00499 593 aa6.29□□□□□ -1.4
CPNE4-214ENST00000617767 ZBTB43O43298 467 aa6.29□□□□□ -1.4
CPNE4-214ENST00000617767 SLC5A9Q2M3M2 681 aa6.29□□□□□ -1.4
CPNE4-214ENST00000617767 MYSM1Q5VVJ2 828 aa6.29□□□□□ -1.4
CPNE4-214ENST00000617767 CLEC4GQ6UXB4 293 aa6.29□□□□□ -1.4
CPNE4-214ENST00000617767 DRAXINQ8NBI3 349 aaPredicted RBP6.29□□□□□ -1.4
CPNE4-214ENST00000617767 MXD3Q9BW11 206 aa6.29□□□□□ -1.4
CPNE4-214ENST00000617767 IRX2Q9BZI1 471 aaPredicted RBP6.29□□□□□ -1.4
CPNE4-214ENST00000617767 NACAP1Q9BZK3 213 aa6.29□□□□□ -1.4
CPNE4-214ENST00000617767 NUP62CLQ9H1M0 184 aa6.29□□□□□ -1.4
CPNE4-214ENST00000617767 ZNF804BA4D1E1 1349 aa6.29□□□□□ -1.4
CPNE4-214ENST00000617767 EIF3JO75822 258 aaKnown RBP6.29□□□□□ -1.4
CPNE4-214ENST00000617767 SLURP2P0DP57 97 aa6.29□□□□□ -1.4
CPNE4-214ENST00000617767 PYGBP11216 843 aa6.29□□□□□ -1.4
CPNE4-214ENST00000617767 APOA5Q6Q788 366 aa6.29□□□□□ -1.4
CPNE4-214ENST00000617767 RASGRP2Q7LDG7 609 aa6.29□□□□□ -1.4
CPNE4-214ENST00000617767 ILDR1Q86SU0 546 aaPredicted RBP6.29□□□□□ -1.4
CPNE4-214ENST00000617767 NCAPG2Q86XI2 1143 aa6.29□□□□□ -1.4
CPNE4-214ENST00000617767 CCAR1Q8IX12 1150 aaKnown RBP6.29□□□□□ -1.4
CPNE4-214ENST00000617767 KCNV2Q8TDN2 545 aa6.29□□□□□ -1.4
CPNE4-214ENST00000617767 DYNLL2Q96FJ2 89 aa6.29□□□□□ -1.4
CPNE4-214ENST00000617767 TACO1Q9BSH4 297 aaKnown RBP6.29□□□□□ -1.4
CPNE4-214ENST00000617767 UBAC1Q9BSL1 405 aa6.29□□□□□ -1.4
CPNE4-214ENST00000617767 ALG1Q9BT22 464 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms