RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 TDRD10Q5VZ19 366 aaKnown RBP7.09□□□□□ -1.27
LINC00397-202ENST00000606785 CDC37L1Q7L3B6 337 aa7.09□□□□□ -1.27
LINC00397-202ENST00000606785 THNSL2Q86YJ6 484 aa7.09□□□□□ -1.27
LINC00397-202ENST00000606785 DHX37Q8IY37 1157 aaKnown RBP7.09□□□□□ -1.27
LINC00397-202ENST00000606785 CYB5D2Q8WUJ1 264 aa7.09□□□□□ -1.27
LINC00397-202ENST00000606785 CDC6Q99741 560 aa7.09□□□□□ -1.27
LINC00397-202ENST00000606785 HAUS7Q99871 368 aa7.09□□□□□ -1.27
LINC00397-202ENST00000606785 DHRS4Q9BTZ2 278 aa7.09□□□□□ -1.27
LINC00397-202ENST00000606785 RUSC1Q9BVN2 902 aa7.09□□□□□ -1.27
LINC00397-202ENST00000606785 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.09□□□□□ -1.27
LINC00397-202ENST00000606785 NCOA5Q9HCD5 579 aaKnown RBP7.09□□□□□ -1.27
LINC00397-202ENST00000606785 ARHGEF4Q9NR80 690 aa7.09□□□□□ -1.27
LINC00397-202ENST00000606785 FAM86C1Q9NVL1 165 aa7.09□□□□□ -1.27
LINC00397-202ENST00000606785 TRAV20A0A0B4J274 112 aa7.08□□□□□ -1.28
LINC00397-202ENST00000606785 C9IYK1 514 aa7.08□□□□□ -1.28
LINC00397-202ENST00000606785 DLL1O00548 723 aa7.08□□□□□ -1.28
LINC00397-202ENST00000606785 IRS4O14654 1257 aaPredicted RBP7.08□□□□□ -1.28
LINC00397-202ENST00000606785 PLD2O14939 933 aa7.08□□□□□ -1.28
LINC00397-202ENST00000606785 EPHX1P07099 455 aa7.08□□□□□ -1.28
LINC00397-202ENST00000606785 NEFMP07197 916 aa7.08□□□□□ -1.28
LINC00397-202ENST00000606785 PDGFRBP09619 1106 aa7.08□□□□□ -1.28
LINC00397-202ENST00000606785 MYCLP1P12525 358 aaPredicted RBP7.08□□□□□ -1.28
LINC00397-202ENST00000606785 CNGA1P29973 690 aa7.08□□□□□ -1.28
LINC00397-202ENST00000606785 STAT3P40763 770 aa7.08□□□□□ -1.28
LINC00397-202ENST00000606785 SLBPQ14493 270 aaKnown RBP eCLIP7.08□□□□□ -1.28
LINC00397-202ENST00000606785 HSP90AA2PQ14568 343 aaPredicted RBP7.08□□□□□ -1.28
LINC00397-202ENST00000606785 TTLL4Q14679 1199 aa7.08□□□□□ -1.28
LINC00397-202ENST00000606785 CBX2Q14781 532 aaPredicted RBP7.08□□□□□ -1.28
LINC00397-202ENST00000606785 NKAPLQ5M9Q1 402 aa7.08□□□□□ -1.28
LINC00397-202ENST00000606785 HEATR6Q6AI08 1181 aaKnown RBP7.08□□□□□ -1.28
LINC00397-202ENST00000606785 BAHD1Q8TBE0 780 aaPredicted RBP7.08□□□□□ -1.28
LINC00397-202ENST00000606785 CHAC2Q8WUX2 184 aa7.08□□□□□ -1.28
LINC00397-202ENST00000606785 IPO9Q96P70 1041 aaKnown RBP7.08□□□□□ -1.28
LINC00397-202ENST00000606785 DPH2Q9BQC3 489 aaPredicted RBP7.08□□□□□ -1.28
LINC00397-202ENST00000606785 AP4E1Q9UPM8 1137 aa7.08□□□□□ -1.28
LINC00397-202ENST00000606785 MRPS23Q9Y3D9 190 aaKnown RBP7.08□□□□□ -1.28
LINC00397-202ENST00000606785 A0A087X0B3 334 aa7.07□□□□□ -1.28
LINC00397-202ENST00000606785 KRTAP4-8A0A0G2JLE6 195 aa7.07□□□□□ -1.28
LINC00397-202ENST00000606785 CBFA2T2O43439 604 aa7.07□□□□□ -1.28
LINC00397-202ENST00000606785 PARNO95453 639 aaKnown RBP7.07□□□□□ -1.28
LINC00397-202ENST00000606785 CST3P01034 146 aaPredicted RBP7.07□□□□□ -1.28
LINC00397-202ENST00000606785 S100BP04271 92 aaPredicted RBP7.07□□□□□ -1.28
LINC00397-202ENST00000606785 ADH5P11766 374 aa7.07□□□□□ -1.28
LINC00397-202ENST00000606785 PPP2R2AP63151 447 aa7.07□□□□□ -1.28
LINC00397-202ENST00000606785 FNDC3BQ53EP0 1204 aaKnown RBP7.07□□□□□ -1.28
LINC00397-202ENST00000606785 FAM209AQ5JX71 171 aa7.07□□□□□ -1.28
LINC00397-202ENST00000606785 AXDND1Q5T1B0 1012 aaPredicted RBP7.07□□□□□ -1.28
LINC00397-202ENST00000606785 TRAPPC3LQ5T215 181 aa7.07□□□□□ -1.28
LINC00397-202ENST00000606785 PRAMEF13Q5VWM6 474 aa7.07□□□□□ -1.28
LINC00397-202ENST00000606785 NUTM2GQ5VZR2 741 aa7.07□□□□□ -1.28
LINC00397-202ENST00000606785 FBXO11Q86XK2 927 aa7.07□□□□□ -1.28
LINC00397-202ENST00000606785 KRTAP19-1Q8IUB9 90 aa7.07□□□□□ -1.28
LINC00397-202ENST00000606785 SCUBE1Q8IWY4 988 aa7.07□□□□□ -1.28
LINC00397-202ENST00000606785 SMG8Q8ND04 991 aaKnown RBP7.07□□□□□ -1.28
LINC00397-202ENST00000606785 AARSD1Q9BTE6 412 aaKnown RBP7.07□□□□□ -1.28
LINC00397-202ENST00000606785 KLHL25Q9H0H3 589 aa7.07□□□□□ -1.28
LINC00397-202ENST00000606785 RNF208Q9H0X6 261 aa7.07□□□□□ -1.28
LINC00397-202ENST00000606785 CAAP1Q9H8G2 361 aa7.07□□□□□ -1.28
LINC00397-202ENST00000606785 SUGCTQ9HAC7 445 aa7.07□□□□□ -1.28
LINC00397-202ENST00000606785 CYP4F12Q9HCS2 524 aa7.07□□□□□ -1.28
LINC00397-202ENST00000606785 LRP2BPQ9P2M1 347 aa7.07□□□□□ -1.28
LINC00397-202ENST00000606785 TRBV23-1A0A0A0MS06 115 aa7.06□□□□□ -1.28
LINC00397-202ENST00000606785 SPDYE3A6NKU9 549 aa7.06□□□□□ -1.28
LINC00397-202ENST00000606785 KCNQ2O43526 872 aa7.06□□□□□ -1.28
LINC00397-202ENST00000606785 WISP1O95388 367 aa7.06□□□□□ -1.28
LINC00397-202ENST00000606785 RAPGEF3O95398 923 aa7.06□□□□□ -1.28
LINC00397-202ENST00000606785 SPATA31C1P0DKV0 1188 aa7.06□□□□□ -1.28
LINC00397-202ENST00000606785 YOD1Q5VVQ6 348 aaPredicted RBP7.06□□□□□ -1.28
LINC00397-202ENST00000606785 UBE3DQ7Z6J8 389 aa7.06□□□□□ -1.28
LINC00397-202ENST00000606785 CCDC144CPQ8IYA2 1237 aa7.06□□□□□ -1.28
LINC00397-202ENST00000606785 PRPF38AQ8NAV1 312 aaKnown RBP7.06□□□□□ -1.28
LINC00397-202ENST00000606785 LRRN4CLQ8ND94 238 aa7.06□□□□□ -1.28
LINC00397-202ENST00000606785 ISL2Q96A47 359 aa7.06□□□□□ -1.28
LINC00397-202ENST00000606785 HOMER2Q9NSB8 354 aa7.06□□□□□ -1.28
LINC00397-202ENST00000606785 ATP8A1Q9Y2Q0 1164 aa7.06□□□□□ -1.28
LINC00397-202ENST00000606785 PDE8AO60658 829 aa7.05□□□□□ -1.28
LINC00397-202ENST00000606785 ITGAVP06756 1048 aa7.05□□□□□ -1.28
LINC00397-202ENST00000606785 FGFR1P11362 822 aa7.05□□□□□ -1.28
LINC00397-202ENST00000606785 POU3F3P20264 500 aaPredicted RBP7.05□□□□□ -1.28
LINC00397-202ENST00000606785 SOX5P35711 763 aa7.05□□□□□ -1.28
LINC00397-202ENST00000606785 SOX4Q06945 474 aaPredicted RBP7.05□□□□□ -1.28
LINC00397-202ENST00000606785 ANKRD39Q53RE8 183 aa7.05□□□□□ -1.28
LINC00397-202ENST00000606785 CCDC181Q5TID7 509 aa7.05□□□□□ -1.28
LINC00397-202ENST00000606785 KIAA1211Q6ZU35 1233 aa7.05□□□□□ -1.28
LINC00397-202ENST00000606785 ACAD11Q709F0 780 aa7.05□□□□□ -1.28
LINC00397-202ENST00000606785 NBPF11Q86T75 865 aa7.05□□□□□ -1.28
LINC00397-202ENST00000606785 FERMT3Q86UX7 667 aa7.05□□□□□ -1.28
LINC00397-202ENST00000606785 ZNF227Q86WZ6 799 aa7.05□□□□□ -1.28
LINC00397-202ENST00000606785 JAMLQ86YT9 394 aa7.05□□□□□ -1.28
LINC00397-202ENST00000606785 FMR1NBQ8N0W7 255 aaPredicted RBP7.05□□□□□ -1.28
LINC00397-202ENST00000606785 ZNF513Q8N8E2 541 aaPredicted RBP7.05□□□□□ -1.28
LINC00397-202ENST00000606785 PPP1R14AQ96A00 147 aa7.05□□□□□ -1.28
LINC00397-202ENST00000606785 MRPL4Q9BYD3 311 aaKnown RBP7.05□□□□□ -1.28
LINC00397-202ENST00000606785 GBP3Q9H0R5 595 aa7.05□□□□□ -1.28
LINC00397-202ENST00000606785 GSX1Q9H4S2 264 aaPredicted RBP7.05□□□□□ -1.28
LINC00397-202ENST00000606785 PIDD1Q9HB75 910 aa7.05□□□□□ -1.28
LINC00397-202ENST00000606785 APEX2Q9UBZ4 518 aa7.05□□□□□ -1.28
LINC00397-202ENST00000606785 A0A0A0MRY4 1105 aa7.04□□□□□ -1.28
LINC00397-202ENST00000606785 RAC1P63000 192 aa7.04□□□□□ -1.28
LINC00397-202ENST00000606785 SUMO1P63165 101 aaKnown RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms