RNA–Protein interactions for RNA: ENST00000599227.5

ZNF544-213, Transcript of zinc finger protein 544, humanhuman

TSL 1 (best) BASIC

Gene ZNF544, Length 3,587 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-213ENST00000599227 TPTE2Q6XPS3 522 aa12.7□□□□□ -0.38
ZNF544-213ENST00000599227 LRRC47Q8N1G4 583 aaKnown RBP12.7□□□□□ -0.38
ZNF544-213ENST00000599227 CCDC102AQ96A19 550 aa12.7□□□□□ -0.38
ZNF544-213ENST00000599227 BMP2KQ9NSY1 1161 aaPredicted RBP12.7□□□□□ -0.38
ZNF544-213ENST00000599227 TUBE1Q9UJT0 475 aa12.7□□□□□ -0.38
ZNF544-213ENST00000599227 TRIM37O94972 964 aa12.7□□□□□ -0.38
ZNF544-213ENST00000599227 DEXIO95424 95 aa12.7□□□□□ -0.38
ZNF544-213ENST00000599227 FMNL1O95466 1100 aaPredicted RBP12.7□□□□□ -0.38
ZNF544-213ENST00000599227 ABL1P00519 1130 aa12.7□□□□□ -0.38
ZNF544-213ENST00000599227 GTF2IP78347 998 aa12.7□□□□□ -0.38
ZNF544-213ENST00000599227 ST5P78524 1137 aa12.7□□□□□ -0.38
ZNF544-213ENST00000599227 RILPL1Q5EBL4 403 aa12.7□□□□□ -0.38
ZNF544-213ENST00000599227 ARFGAP3Q9NP61 516 aa12.7□□□□□ -0.38
ZNF544-213ENST00000599227 ENC1O14682 589 aa12.69□□□□□ -0.38
ZNF544-213ENST00000599227 KIF5CO60282 957 aa12.69□□□□□ -0.38
ZNF544-213ENST00000599227 KRT18P05783 430 aaKnown RBP12.69□□□□□ -0.38
ZNF544-213ENST00000599227 VEGFAP15692 232 aaPredicted RBP12.69□□□□□ -0.38
ZNF544-213ENST00000599227 GABPB1Q06547 395 aaPredicted RBP12.69□□□□□ -0.38
ZNF544-213ENST00000599227 TSR1Q2NL82 804 aaKnown RBP12.69□□□□□ -0.38
ZNF544-213ENST00000599227 CRACR2BQ8N4Y2 399 aaPredicted RBP12.69□□□□□ -0.38
ZNF544-213ENST00000599227 TC2NQ8N9U0 490 aa12.69□□□□□ -0.38
ZNF544-213ENST00000599227 GJA10Q969M2 543 aa12.69□□□□□ -0.38
ZNF544-213ENST00000599227 CDK5RAP3Q96JB5 506 aa12.69□□□□□ -0.38
ZNF544-213ENST00000599227 PARD6BQ9BYG5 372 aa12.69□□□□□ -0.38
ZNF544-213ENST00000599227 DACH1Q9UI36 760 aa12.69□□□□□ -0.38
ZNF544-213ENST00000599227 HPSEQ9Y251 543 aa12.69□□□□□ -0.38
ZNF544-213ENST00000599227 PARP3Q9Y6F1 533 aa12.69□□□□□ -0.38
ZNF544-213ENST00000599227 FER1L4A9Z1Z3 1794 aa12.69□□□□□ -0.38
ZNF544-213ENST00000599227 A0A087X0B3 334 aa12.69□□□□□ -0.38
ZNF544-213ENST00000599227 PP2D1A8MPX8 630 aa12.69□□□□□ -0.38
ZNF544-213ENST00000599227 CSF1RP07333 972 aa12.69□□□□□ -0.38
ZNF544-213ENST00000599227 CCDC175P0C221 793 aa12.69□□□□□ -0.38
ZNF544-213ENST00000599227 SOGA3Q5TF21 947 aa12.69□□□□□ -0.38
ZNF544-213ENST00000599227 DYMQ7RTS9 669 aa12.69□□□□□ -0.38
ZNF544-213ENST00000599227 ADGRA1Q86SQ6 560 aa12.69□□□□□ -0.38
ZNF544-213ENST00000599227 FBXO2Q9UK22 296 aaPredicted RBP12.69□□□□□ -0.38
ZNF544-213ENST00000599227 CPDO75976 1380 aa12.69□□□□□ -0.38
ZNF544-213ENST00000599227 SYNRGQ9UMZ2 1314 aa12.69□□□□□ -0.38
ZNF544-213ENST00000599227 CCDC196A0A1B0GTZ2 297 aa12.69□□□□□ -0.38
ZNF544-213ENST00000599227 ZMYND10O75800 440 aa12.69□□□□□ -0.38
ZNF544-213ENST00000599227 CD44P16070 742 aaKnown RBP12.69□□□□□ -0.38
ZNF544-213ENST00000599227 IFNAR1P17181 557 aa12.69□□□□□ -0.38
ZNF544-213ENST00000599227 UBA7P41226 1012 aa12.69□□□□□ -0.38
ZNF544-213ENST00000599227 TNNI2P48788 182 aa12.69□□□□□ -0.38
ZNF544-213ENST00000599227 EIF5P55010 431 aaKnown RBP12.69□□□□□ -0.38
ZNF544-213ENST00000599227 PTGDRQ13258 359 aa12.69□□□□□ -0.38
ZNF544-213ENST00000599227 SYCP1Q15431 976 aa12.69□□□□□ -0.38
ZNF544-213ENST00000599227 RABEP2Q9H5N1 569 aa12.69□□□□□ -0.38
ZNF544-213ENST00000599227 AFDNP55196 1824 aaKnown RBP12.68□□□□□ -0.38
ZNF544-213ENST00000599227 TNNT3P45378 269 aaPredicted RBP12.68□□□□□ -0.38
ZNF544-213ENST00000599227 PLA2G4AP47712 749 aa12.68□□□□□ -0.38
ZNF544-213ENST00000599227 RNASE9P60153 205 aaKnown RBP12.68□□□□□ -0.38
ZNF544-213ENST00000599227 CRNKL1Q9BZJ0 848 aaKnown RBP12.68□□□□□ -0.38
ZNF544-213ENST00000599227 CNNM2Q9H8M5 875 aa12.68□□□□□ -0.38
ZNF544-213ENST00000599227 FHOD1Q9Y613 1164 aa12.68□□□□□ -0.38
ZNF544-213ENST00000599227 PDE4DIPQ5VU43 2346 aa12.68□□□□□ -0.38
ZNF544-213ENST00000599227 C5P01031 1676 aa12.68□□□□□ -0.38
ZNF544-213ENST00000599227 CCDC66A2RUB6 948 aa12.68□□□□□ -0.38
ZNF544-213ENST00000599227 LDHBP07195 334 aaKnown RBP12.68□□□□□ -0.38
ZNF544-213ENST00000599227 PTPREP23469 700 aa12.68□□□□□ -0.38
ZNF544-213ENST00000599227 USP21Q9UK80 565 aa12.68□□□□□ -0.38
ZNF544-213ENST00000599227 MARF1Q9Y4F3 1742 aaKnown RBP12.68□□□□□ -0.38
ZNF544-213ENST00000599227 KRT2P35908 639 aa12.68□□□□□ -0.38
ZNF544-213ENST00000599227 SLC16A2P36021 539 aa12.68□□□□□ -0.38
ZNF544-213ENST00000599227 CACNB1Q02641 598 aaPredicted RBP12.68□□□□□ -0.38
ZNF544-213ENST00000599227 INF2Q27J81 1249 aa12.68□□□□□ -0.38
ZNF544-213ENST00000599227 RAD9BQ6WBX8 426 aa12.68□□□□□ -0.38
ZNF544-213ENST00000599227 TIGD1Q96MW7 591 aa12.68□□□□□ -0.38
ZNF544-213ENST00000599227 CEP131Q9UPN4 1083 aa12.68□□□□□ -0.38
ZNF544-213ENST00000599227 ANKRD65E5RJM6 399 aa12.67□□□□□ -0.38
ZNF544-213ENST00000599227 TADA3O75528 432 aa12.67□□□□□ -0.38
ZNF544-213ENST00000599227 NAPAP54920 295 aa12.67□□□□□ -0.38
ZNF544-213ENST00000599227 PLS1Q14651 629 aa12.67□□□□□ -0.38
ZNF544-213ENST00000599227 SMC1AQ14683 1233 aaKnown RBP12.67□□□□□ -0.38
ZNF544-213ENST00000599227 KIAA0825Q8IV33 1275 aa12.67□□□□□ -0.38
ZNF544-213ENST00000599227 SLC35F6Q8N357 371 aa12.67□□□□□ -0.38
ZNF544-213ENST00000599227 MLKLQ8NB16 471 aa12.67□□□□□ -0.38
ZNF544-213ENST00000599227 BPIFA3Q9BQP9 254 aa12.67□□□□□ -0.38
ZNF544-213ENST00000599227 RNF41Q9H4P4 317 aaPredicted RBP12.67□□□□□ -0.38
ZNF544-213ENST00000599227 L2HGDHQ9H9P8 463 aa12.67□□□□□ -0.38
ZNF544-213ENST00000599227 VPS18Q9P253 973 aa12.67□□□□□ -0.38
ZNF544-213ENST00000599227 GDAQ9Y2T3 454 aa12.67□□□□□ -0.38
ZNF544-213ENST00000599227 TRIM49BA6NDI0 452 aa12.67□□□□□ -0.38
ZNF544-213ENST00000599227 TXKP42681 527 aa12.67□□□□□ -0.38
ZNF544-213ENST00000599227 NFIXQ14938 502 aa12.67□□□□□ -0.38
ZNF544-213ENST00000599227 CNBD1Q8NA66 436 aa12.67□□□□□ -0.38
ZNF544-213ENST00000599227 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.67□□□□□ -0.38
ZNF544-213ENST00000599227 TRIM10Q9UDY6 481 aa12.67□□□□□ -0.38
ZNF544-213ENST00000599227 LMO7Q8WWI1 1683 aa12.67□□□□□ -0.38
ZNF544-213ENST00000599227 CHMP4BP1P59074 171 aa12.66□□□□□ -0.38
ZNF544-213ENST00000599227 USP17L2Q6R6M4 530 aa12.66□□□□□ -0.38
ZNF544-213ENST00000599227 BIN2Q9UBW5 565 aaPredicted RBP12.66□□□□□ -0.38
ZNF544-213ENST00000599227 SORBS3O60504 671 aa12.66□□□□□ -0.38
ZNF544-213ENST00000599227 SASH3O75995 380 aa12.66□□□□□ -0.38
ZNF544-213ENST00000599227 UBXN1Q04323 297 aa12.66□□□□□ -0.38
ZNF544-213ENST00000599227 TTC38Q5R3I4 469 aa12.66□□□□□ -0.38
ZNF544-213ENST00000599227 TEX11Q8IYF3 940 aa12.66□□□□□ -0.38
ZNF544-213ENST00000599227 MED15Q96RN5 788 aa12.66□□□□□ -0.38
ZNF544-213ENST00000599227 KANSL2Q9H9L4 492 aa12.66□□□□□ -0.38
ZNF544-213ENST00000599227 KRT9P35527 623 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms