RNA–Protein interactions for RNA: ENST00000599040.5

FARP1-226, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-226ENST00000599040 ERVK-9P63128 1117 aa11.08□□□□□ -0.64
FARP1-226ENST00000599040 ERVK-24P63145 666 aa11.08□□□□□ -0.64
FARP1-226ENST00000599040 KRT32Q14532 448 aa11.08□□□□□ -0.64
FARP1-226ENST00000599040 UBE3CQ15386 1083 aa11.08□□□□□ -0.64
FARP1-226ENST00000599040 APPBP2Q92624 585 aa11.08□□□□□ -0.64
FARP1-226ENST00000599040 EDC3Q96F86 508 aaKnown RBP11.08□□□□□ -0.64
FARP1-226ENST00000599040 P2RX7Q99572 595 aaKnown RBP11.08□□□□□ -0.64
FARP1-226ENST00000599040 SH2D4AQ9H788 454 aa11.08□□□□□ -0.64
FARP1-226ENST00000599040 PCDH10Q9P2E7 1040 aa11.08□□□□□ -0.64
FARP1-226ENST00000599040 CTNNA3Q9UI47 895 aa11.08□□□□□ -0.64
FARP1-226ENST00000599040 U3KPZ7 1027 aaPredicted RBP11.08□□□□□ -0.64
FARP1-226ENST00000599040 MYH8P13535 1937 aa11.07□□□□□ -0.64
FARP1-226ENST00000599040 A0A0D9SFI3 127 aa11.07□□□□□ -0.64
FARP1-226ENST00000599040 TCRBV5S4A2TA0A5A2 114 aa11.07□□□□□ -0.64
FARP1-226ENST00000599040 MPHOSPH10O00566 681 aaKnown RBP11.07□□□□□ -0.64
FARP1-226ENST00000599040 HSP90AA1P07900 732 aaKnown RBP11.07□□□□□ -0.64
FARP1-226ENST00000599040 XRCC5P13010 732 aaKnown RBP11.07□□□□□ -0.64
FARP1-226ENST00000599040 PSMA5P28066 241 aa11.07□□□□□ -0.64
FARP1-226ENST00000599040 SHMT1P34896 483 aa11.07□□□□□ -0.64
FARP1-226ENST00000599040 ADD2P35612 726 aa11.07□□□□□ -0.64
FARP1-226ENST00000599040 PLCD1P51178 756 aa11.07□□□□□ -0.64
FARP1-226ENST00000599040 JAG1P78504 1218 aa11.07□□□□□ -0.64
FARP1-226ENST00000599040 ZYXQ15942 572 aaKnown RBP11.07□□□□□ -0.64
FARP1-226ENST00000599040 ZMYM1Q5SVZ6 1142 aa11.07□□□□□ -0.64
FARP1-226ENST00000599040 FAM227BQ96M60 508 aa11.07□□□□□ -0.64
FARP1-226ENST00000599040 DEFB118Q96PH6 123 aa11.07□□□□□ -0.64
FARP1-226ENST00000599040 PAGR1Q9BTK6 254 aa11.07□□□□□ -0.64
FARP1-226ENST00000599040 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.07□□□□□ -0.64
FARP1-226ENST00000599040 HMX1Q9NP08 348 aaPredicted RBP11.07□□□□□ -0.64
FARP1-226ENST00000599040 DCP1AQ9NPI6 582 aaPredicted RBP11.07□□□□□ -0.64
FARP1-226ENST00000599040 PAK6Q9NQU5 681 aaPredicted RBP11.07□□□□□ -0.64
FARP1-226ENST00000599040 EMILIN3Q9NT22 766 aa11.07□□□□□ -0.64
FARP1-226ENST00000599040 RABGAP1Q9Y3P9 1069 aa11.07□□□□□ -0.64
FARP1-226ENST00000599040 NR2E3Q9Y5X4 410 aa11.07□□□□□ -0.64
FARP1-226ENST00000599040 RPTORQ8N122 1335 aa11.07□□□□□ -0.64
FARP1-226ENST00000599040 MBD4O95243 580 aa11.06□□□□□ -0.64
FARP1-226ENST00000599040 GNAT2P19087 354 aa11.06□□□□□ -0.64
FARP1-226ENST00000599040 VCAM1P19320 739 aa11.06□□□□□ -0.64
FARP1-226ENST00000599040 HSPA4P34932 840 aa11.06□□□□□ -0.64
FARP1-226ENST00000599040 RGS2P41220 211 aa11.06□□□□□ -0.64
FARP1-226ENST00000599040 GABPAQ06546 454 aa11.06□□□□□ -0.64
FARP1-226ENST00000599040 SHROOM1Q2M3G4 852 aaPredicted RBP11.06□□□□□ -0.64
FARP1-226ENST00000599040 HABP4Q5JVS0 413 aaKnown RBP11.06□□□□□ -0.64
FARP1-226ENST00000599040 TMEM179Q6ZVK1 233 aa11.06□□□□□ -0.64
FARP1-226ENST00000599040 PLEKHH3Q7Z736 793 aa11.06□□□□□ -0.64
FARP1-226ENST00000599040 UBE2Q1Q7Z7E8 422 aa11.06□□□□□ -0.64
FARP1-226ENST00000599040 LCORLQ8N3X6 602 aa11.06□□□□□ -0.64
FARP1-226ENST00000599040 ANKLE1Q8NAG6 615 aa11.06□□□□□ -0.64
FARP1-226ENST00000599040 SDR42E1Q8WUS8 393 aa11.06□□□□□ -0.64
FARP1-226ENST00000599040 SNX21Q969T3 373 aa11.06□□□□□ -0.64
FARP1-226ENST00000599040 DSCC1Q9BVC3 393 aa11.06□□□□□ -0.64
FARP1-226ENST00000599040 LSG1Q9H089 658 aaKnown RBP11.06□□□□□ -0.64
FARP1-226ENST00000599040 GJD2Q9UKL4 321 aa11.06□□□□□ -0.64
FARP1-226ENST00000599040 H0YGN5 161 aa11.05□□□□□ -0.64
FARP1-226ENST00000599040 CYP2B6P20813 491 aa11.05□□□□□ -0.64
FARP1-226ENST00000599040 LBX2Q6XYB7 198 aa11.05□□□□□ -0.64
FARP1-226ENST00000599040 CATSPERGQ6ZRH7 1159 aa11.05□□□□□ -0.64
FARP1-226ENST00000599040 NECAB2Q7Z6G3 386 aa11.05□□□□□ -0.64
FARP1-226ENST00000599040 LPAR1Q92633 364 aa11.05□□□□□ -0.64
FARP1-226ENST00000599040 MAP4K1Q92918 833 aa11.05□□□□□ -0.64
FARP1-226ENST00000599040 CCDC17Q96LX7 622 aa11.05□□□□□ -0.64
FARP1-226ENST00000599040 NACAP1Q9BZK3 213 aa11.05□□□□□ -0.64
FARP1-226ENST00000599040 CRISPLD2Q9H0B8 497 aa11.05□□□□□ -0.64
FARP1-226ENST00000599040 ARMT1Q9H993 441 aa11.05□□□□□ -0.64
FARP1-226ENST00000599040 ARHGEF10LQ9HCE6 1279 aa11.05□□□□□ -0.64
FARP1-226ENST00000599040 TXNRD2Q9NNW7 524 aa11.05□□□□□ -0.64
FARP1-226ENST00000599040 RBPJLQ9UBG7 517 aa11.05□□□□□ -0.64
FARP1-226ENST00000599040 RBM8AQ9Y5S9 174 aaKnown RBP11.05□□□□□ -0.64
FARP1-226ENST00000599040 IVNS1ABPQ9Y6Y0 642 aa11.05□□□□□ -0.64
FARP1-226ENST00000599040 SEPT2Q15019 361 aa11.04□□□□□ -0.64
FARP1-226ENST00000599040 WDR78Q5VTH9 848 aa11.04□□□□□ -0.64
FARP1-226ENST00000599040 GPR142Q7Z601 462 aa11.04□□□□□ -0.64
FARP1-226ENST00000599040 ACER1Q8TDN7 264 aa11.04□□□□□ -0.64
FARP1-226ENST00000599040 APBA2Q99767 749 aa11.04□□□□□ -0.64
FARP1-226ENST00000599040 TANGO6Q9C0B7 1094 aa11.04□□□□□ -0.64
FARP1-226ENST00000599040 RPAP3Q9H6T3 665 aaPredicted RBP11.04□□□□□ -0.64
FARP1-226ENST00000599040 HOXC10Q9NYD6 342 aa11.04□□□□□ -0.64
FARP1-226ENST00000599040 SLC4A4Q9Y6R1 1079 aa11.04□□□□□ -0.64
FARP1-226ENST00000599040 BAZ2AQ9UIF9 1905 aaKnown RBP11.03□□□□□ -0.64
FARP1-226ENST00000599040 PLXNB2O15031 1838 aa11.03□□□□□ -0.64
FARP1-226ENST00000599040 EVI5O60447 810 aa11.03□□□□□ -0.64
FARP1-226ENST00000599040 APPP05067 770 aa11.03□□□□□ -0.64
FARP1-226ENST00000599040 HMGB1P09429 215 aaKnown RBP11.03□□□□□ -0.64
FARP1-226ENST00000599040 PRKAR2AP13861 404 aaKnown RBP11.03□□□□□ -0.64
FARP1-226ENST00000599040 ICA1Q05084 483 aa11.03□□□□□ -0.64
FARP1-226ENST00000599040 IMMTQ16891 758 aaKnown RBP11.03□□□□□ -0.64
FARP1-226ENST00000599040 MB21D1Q8N884 522 aa11.03□□□□□ -0.64
FARP1-226ENST00000599040 TRIB2Q92519 343 aa11.03□□□□□ -0.64
FARP1-226ENST00000599040 TM6SF1Q9BZW5 370 aa11.03□□□□□ -0.64
FARP1-226ENST00000599040 PORCNQ9H237 461 aa11.03□□□□□ -0.64
FARP1-226ENST00000599040 ARPP21Q9UBL0 812 aaPredicted RBP11.03□□□□□ -0.64
FARP1-226ENST00000599040 CYP46A1Q9Y6A2 500 aa11.03□□□□□ -0.64
FARP1-226ENST00000599040 TRIOBPQ9H2D6 2365 aa11.03□□□□□ -0.64
FARP1-226ENST00000599040 SLC15A5A6NIM6 579 aa11.02□□□□□ -0.65
FARP1-226ENST00000599040 SPDYE16A6NNV3 312 aaPredicted RBP11.02□□□□□ -0.65
FARP1-226ENST00000599040 USP17L12C9JPN9 530 aa11.02□□□□□ -0.65
FARP1-226ENST00000599040 USP17L21D6R901 530 aa11.02□□□□□ -0.65
FARP1-226ENST00000599040 GPAA1O43292 621 aa11.02□□□□□ -0.65
FARP1-226ENST00000599040 GUCY1A2P33402 732 aa11.02□□□□□ -0.65
FARP1-226ENST00000599040 NEK4P51957 841 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms