RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 TRMT44Q8IYL2 757 aaKnown RBP21.48■■□□□ 1.03
CHMP2A-203ENST00000597209 USP6NLQ92738 828 aa21.48■■□□□ 1.03
CHMP2A-203ENST00000597209 KANSL2Q9H9L4 492 aa21.48■■□□□ 1.03
CHMP2A-203ENST00000597209 ROBO3Q96MS0 1386 aa21.48■■□□□ 1.03
CHMP2A-203ENST00000597209 MORN1Q5T089 497 aa21.47■■□□□ 1.03
CHMP2A-203ENST00000597209 VCPKMTQ9H867 229 aa21.47■■□□□ 1.03
CHMP2A-203ENST00000597209 STAP2Q9UGK3 403 aa21.47■■□□□ 1.03
CHMP2A-203ENST00000597209 PATL2C9JE40 543 aaKnown RBP21.46■■□□□ 1.03
CHMP2A-203ENST00000597209 M0R2C6 588 aa21.46■■□□□ 1.03
CHMP2A-203ENST00000597209 CYP2B6P20813 491 aa21.46■■□□□ 1.03
CHMP2A-203ENST00000597209 FSD1Q9BTV5 496 aa21.46■■□□□ 1.03
CHMP2A-203ENST00000597209 CRISPLD2Q9H0B8 497 aa21.46■■□□□ 1.03
CHMP2A-203ENST00000597209 BTBD7Q9P203 1132 aa21.46■■□□□ 1.03
CHMP2A-203ENST00000597209 RGS2P41220 211 aa21.45■■□□□ 1.02
CHMP2A-203ENST00000597209 KIAA1755Q5JYT7 1200 aa21.45■■□□□ 1.02
CHMP2A-203ENST00000597209 ZMYM1Q5SVZ6 1142 aa21.45■■□□□ 1.02
CHMP2A-203ENST00000597209 TRIB2Q92519 343 aa21.45■■□□□ 1.02
CHMP2A-203ENST00000597209 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.45■■□□□ 1.02
CHMP2A-203ENST00000597209 EPB41L4AQ9HCS5 686 aaPredicted RBP21.45■■□□□ 1.02
CHMP2A-203ENST00000597209 RPTORQ8N122 1335 aa21.45■■□□□ 1.02
CHMP2A-203ENST00000597209 WDR46O15213 610 aaKnown RBP21.44■■□□□ 1.02
CHMP2A-203ENST00000597209 EEF2P13639 858 aaKnown RBP21.44■■□□□ 1.02
CHMP2A-203ENST00000597209 DSG3P32926 999 aa21.44■■□□□ 1.02
CHMP2A-203ENST00000597209 MAP3K21Q5TCX8 1036 aa21.44■■□□□ 1.02
CHMP2A-203ENST00000597209 CLEC10AQ8IUN9 316 aa21.44■■□□□ 1.02
CHMP2A-203ENST00000597209 IFNL3Q8IZI9 196 aa21.44■■□□□ 1.02
CHMP2A-203ENST00000597209 DEFB118Q96PH6 123 aa21.44■■□□□ 1.02
CHMP2A-203ENST00000597209 TANGO6Q9C0B7 1094 aa21.44■■□□□ 1.02
CHMP2A-203ENST00000597209 HMX1Q9NP08 348 aaPredicted RBP21.44■■□□□ 1.02
CHMP2A-203ENST00000597209 RLFQ13129 1914 aa21.44■■□□□ 1.02
CHMP2A-203ENST00000597209 GREB1LQ9C091 1923 aaPredicted RBP21.44■■□□□ 1.02
CHMP2A-203ENST00000597209 SLC15A5A6NIM6 579 aa21.43■■□□□ 1.02
CHMP2A-203ENST00000597209 MINDY4BA8MYZ0 360 aa21.43■■□□□ 1.02
CHMP2A-203ENST00000597209 RASA1P20936 1047 aa21.43■■□□□ 1.02
CHMP2A-203ENST00000597209 TDO2P48775 406 aa21.43■■□□□ 1.02
CHMP2A-203ENST00000597209 MAP2K5Q13163 448 aa21.43■■□□□ 1.02
CHMP2A-203ENST00000597209 TICAM2Q86XR7 235 aa21.43■■□□□ 1.02
CHMP2A-203ENST00000597209 MB21D1Q8N884 522 aa21.43■■□□□ 1.02
CHMP2A-203ENST00000597209 APBA2Q99767 749 aa21.43■■□□□ 1.02
CHMP2A-203ENST00000597209 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.43■■□□□ 1.02
CHMP2A-203ENST00000597209 NACAP1Q9BZK3 213 aa21.43■■□□□ 1.02
CHMP2A-203ENST00000597209 RWDD1Q9H446 243 aaPredicted RBP21.43■■□□□ 1.02
CHMP2A-203ENST00000597209 MKNK2Q9HBH9 465 aa21.43■■□□□ 1.02
CHMP2A-203ENST00000597209 ZNF287Q9HBT7 754 aa21.43■■□□□ 1.02
CHMP2A-203ENST00000597209 CWC22Q9HCG8 908 aaKnown RBP21.43■■□□□ 1.02
CHMP2A-203ENST00000597209 A0A0G2JMZ2 1700 aa21.42■■□□□ 1.02
CHMP2A-203ENST00000597209 TFRCP02786 760 aaKnown RBP21.42■■□□□ 1.02
CHMP2A-203ENST00000597209 APPP05067 770 aa21.42■■□□□ 1.02
CHMP2A-203ENST00000597209 PTPREP23469 700 aa21.42■■□□□ 1.02
CHMP2A-203ENST00000597209 PDE1AP54750 535 aa21.42■■□□□ 1.02
CHMP2A-203ENST00000597209 EVI5LQ96CN4 794 aa21.42■■□□□ 1.02
CHMP2A-203ENST00000597209 SEC62Q99442 399 aaKnown RBP21.42■■□□□ 1.02
CHMP2A-203ENST00000597209 MKI67P46013 3256 aaKnown RBP21.42■■□□□ 1.02
CHMP2A-203ENST00000597209 FARP2O94887 1054 aaPredicted RBP21.41■■□□□ 1.02
CHMP2A-203ENST00000597209 ZKSCAN1P17029 563 aaPredicted RBP21.41■■□□□ 1.02
CHMP2A-203ENST00000597209 TRIM32Q13049 653 aa21.41■■□□□ 1.02
CHMP2A-203ENST00000597209 SMC5Q8IY18 1101 aa21.41■■□□□ 1.02
CHMP2A-203ENST00000597209 SHCBP1Q8NEM2 672 aa21.41■■□□□ 1.02
CHMP2A-203ENST00000597209 HTATIP2Q9BUP3 242 aa21.41■■□□□ 1.02
CHMP2A-203ENST00000597209 GOPCQ9HD26 462 aa21.41■■□□□ 1.02
CHMP2A-203ENST00000597209 NYAP2Q9P242 653 aa21.41■■□□□ 1.02
CHMP2A-203ENST00000597209 FLOT1O75955 427 aa21.4■■□□□ 1.02
CHMP2A-203ENST00000597209 HOXC6P09630 235 aa21.4■■□□□ 1.02
CHMP2A-203ENST00000597209 GRB14Q14449 540 aa21.4■■□□□ 1.02
CHMP2A-203ENST00000597209 SPICE1Q8N0Z3 855 aa21.4■■□□□ 1.02
CHMP2A-203ENST00000597209 ANKLE1Q8NAG6 615 aa21.4■■□□□ 1.02
CHMP2A-203ENST00000597209 MOV10L1Q9BXT6 1211 aaKnown RBP21.4■■□□□ 1.02
CHMP2A-203ENST00000597209 SPATC1LQ9H0A9 340 aa21.4■■□□□ 1.02
CHMP2A-203ENST00000597209 IVNS1ABPQ9Y6Y0 642 aa21.4■■□□□ 1.02
CHMP2A-203ENST00000597209 IGKV6D-41A0A0C4DH26 115 aa21.39■■□□□ 1.01
CHMP2A-203ENST00000597209 STRNO43815 780 aa21.39■■□□□ 1.01
CHMP2A-203ENST00000597209 ATP2B2Q01814 1243 aa21.39■■□□□ 1.01
CHMP2A-203ENST00000597209 ZNF444Q8N0Y2 327 aaPredicted RBP21.39■■□□□ 1.01
CHMP2A-203ENST00000597209 ADAMTS5Q9UNA0 930 aa21.39■■□□□ 1.01
CHMP2A-203ENST00000597209 PARP14Q460N5 1801 aa21.39■■□□□ 1.01
CHMP2A-203ENST00000597209 SLC34A2O95436 690 aa21.38■■□□□ 1.01
CHMP2A-203ENST00000597209 PRKAR2AP13861 404 aaKnown RBP21.38■■□□□ 1.01
CHMP2A-203ENST00000597209 CACNB2Q08289 660 aaPredicted RBP21.38■■□□□ 1.01
CHMP2A-203ENST00000597209 CCL14Q16627 93 aa21.38■■□□□ 1.01
CHMP2A-203ENST00000597209 WDR78Q5VTH9 848 aa21.38■■□□□ 1.01
CHMP2A-203ENST00000597209 ATG4CQ96DT6 458 aa21.38■■□□□ 1.01
CHMP2A-203ENST00000597209 NAPBQ9H115 298 aa21.38■■□□□ 1.01
CHMP2A-203ENST00000597209 SYNPO2Q9UMS6 1093 aa21.38■■□□□ 1.01
CHMP2A-203ENST00000597209 SLC3A2P08195 630 aaKnown RBP21.37■■□□□ 1.01
CHMP2A-203ENST00000597209 PDE4BQ07343 736 aa21.37■■□□□ 1.01
CHMP2A-203ENST00000597209 STK11IPQ8N1F8 1099 aa21.37■■□□□ 1.01
CHMP2A-203ENST00000597209 MKL1Q969V6 931 aa21.37■■□□□ 1.01
CHMP2A-203ENST00000597209 MROH8Q9H579 483 aa21.37■■□□□ 1.01
CHMP2A-203ENST00000597209 HELLSQ9NRZ9 838 aa21.37■■□□□ 1.01
CHMP2A-203ENST00000597209 ZNF236Q9UL36 1845 aa21.36■■□□□ 1.01
CHMP2A-203ENST00000597209 ERCC3P19447 782 aa21.36■■□□□ 1.01
CHMP2A-203ENST00000597209 PPARAQ07869 468 aa21.36■■□□□ 1.01
CHMP2A-203ENST00000597209 EXOC6Q8TAG9 804 aa21.36■■□□□ 1.01
CHMP2A-203ENST00000597209 DPF3Q92784 378 aa21.36■■□□□ 1.01
CHMP2A-203ENST00000597209 OGDHLQ9ULD0 1010 aa21.36■■□□□ 1.01
CHMP2A-203ENST00000597209 PLIN4Q96Q06 1357 aa21.36■■□□□ 1.01
CHMP2A-203ENST00000597209 FOXP2O15409 715 aa21.35■■□□□ 1.01
CHMP2A-203ENST00000597209 SLC25A27O95847 323 aa21.35■■□□□ 1.01
CHMP2A-203ENST00000597209 IGHA2P01877 340 aa21.35■■□□□ 1.01
CHMP2A-203ENST00000597209 IGHDP01880 384 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms