RNA–Protein interactions for RNA: ENST00000593101.5

PRKCSH-219, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 578 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-219ENST00000593101 MTMR7Q9Y216 660 aa18.18■□□□□ 0.5
PRKCSH-219ENST00000593101 TMX2Q9Y320 296 aa18.18■□□□□ 0.5
PRKCSH-219ENST00000593101 TRIM75PA6NK02 468 aa18.17■□□□□ 0.5
PRKCSH-219ENST00000593101 C19orf81C9J6K1 198 aa18.17■□□□□ 0.5
PRKCSH-219ENST00000593101 APLP1P51693 650 aa18.17■□□□□ 0.5
PRKCSH-219ENST00000593101 ZNF157P51786 506 aaPredicted RBP18.17■□□□□ 0.5
PRKCSH-219ENST00000593101 PPIL2Q13356 520 aa18.17■□□□□ 0.5
PRKCSH-219ENST00000593101 ZYXQ15942 572 aaKnown RBP18.17■□□□□ 0.5
PRKCSH-219ENST00000593101 RGMBQ6NW40 437 aa18.17■□□□□ 0.5
PRKCSH-219ENST00000593101 ZNF654Q8IZM8 581 aa18.17■□□□□ 0.5
PRKCSH-219ENST00000593101 NUP133Q8WUM0 1156 aa18.17■□□□□ 0.5
PRKCSH-219ENST00000593101 GOPCQ9HD26 462 aa18.17■□□□□ 0.5
PRKCSH-219ENST00000593101 SYNPO2Q9UMS6 1093 aa18.17■□□□□ 0.5
PRKCSH-219ENST00000593101 LIMCH1Q9UPQ0 1083 aa18.17■□□□□ 0.5
PRKCSH-219ENST00000593101 F5H6K3 240 aa18.16■□□□□ 0.5
PRKCSH-219ENST00000593101 CXCL11O14625 94 aa18.16■□□□□ 0.5
PRKCSH-219ENST00000593101 CALM1P0DP23 149 aa18.16■□□□□ 0.5
PRKCSH-219ENST00000593101 CALM2P0DP24 149 aa18.16■□□□□ 0.5
PRKCSH-219ENST00000593101 CALM3P0DP25 149 aa18.16■□□□□ 0.5
PRKCSH-219ENST00000593101 USP14P54578 494 aa18.16■□□□□ 0.5
PRKCSH-219ENST00000593101 BACE1P56817 501 aa18.16■□□□□ 0.5
PRKCSH-219ENST00000593101 EVCP57679 992 aa18.16■□□□□ 0.5
PRKCSH-219ENST00000593101 KLRC3Q07444 240 aa18.16■□□□□ 0.5
PRKCSH-219ENST00000593101 SLFN13Q68D06 897 aa18.16■□□□□ 0.5
PRKCSH-219ENST00000593101 USP17L2Q6R6M4 530 aa18.16■□□□□ 0.5
PRKCSH-219ENST00000593101 CHMP4CQ96CF2 233 aa18.16■□□□□ 0.5
PRKCSH-219ENST00000593101 ZNF274Q96GC6 653 aaPredicted RBP18.16■□□□□ 0.5
PRKCSH-219ENST00000593101 KIAA1683Q9H0B3 1180 aa18.16■□□□□ 0.5
PRKCSH-219ENST00000593101 TPCN1Q9ULQ1 816 aa18.16■□□□□ 0.5
PRKCSH-219ENST00000593101 OTOFQ9HC10 1997 aa18.16■□□□□ 0.5
PRKCSH-219ENST00000593101 IRF6O14896 467 aa18.15■□□□□ 0.5
PRKCSH-219ENST00000593101 ZBTB43O43298 467 aa18.15■□□□□ 0.5
PRKCSH-219ENST00000593101 MTMR2Q13614 643 aa18.15■□□□□ 0.5
PRKCSH-219ENST00000593101 GMCL1P1Q8NEA9 526 aa18.15■□□□□ 0.5
PRKCSH-219ENST00000593101 WNK4Q96J92 1243 aa18.15■□□□□ 0.5
PRKCSH-219ENST00000593101 ZSCAN31Q96LW9 406 aaPredicted RBP18.15■□□□□ 0.5
PRKCSH-219ENST00000593101 VCPKMTQ9H867 229 aa18.15■□□□□ 0.5
PRKCSH-219ENST00000593101 TMOD4Q9NZQ9 345 aa18.15■□□□□ 0.5
PRKCSH-219ENST00000593101 MYH4Q9Y623 1939 aa18.15■□□□□ 0.5
PRKCSH-219ENST00000593101 DDAH1O94760 285 aa18.14■□□□□ 0.49
PRKCSH-219ENST00000593101 CD2BP2O95400 341 aaKnown RBP18.14■□□□□ 0.49
PRKCSH-219ENST00000593101 PDIA3P30101 505 aaKnown RBP18.14■□□□□ 0.49
PRKCSH-219ENST00000593101 STK3Q13188 491 aa18.14■□□□□ 0.49
PRKCSH-219ENST00000593101 APOA5Q6Q788 366 aa18.14■□□□□ 0.49
PRKCSH-219ENST00000593101 RAB11FIP4Q86YS3 637 aa18.14■□□□□ 0.49
PRKCSH-219ENST00000593101 SNX21Q969T3 373 aa18.14■□□□□ 0.49
PRKCSH-219ENST00000593101 MYL10Q9BUA6 226 aa18.14■□□□□ 0.49
PRKCSH-219ENST00000593101 SLKQ9H2G2 1235 aaPredicted RBP18.14■□□□□ 0.49
PRKCSH-219ENST00000593101 CREBZFQ9NS37 354 aa18.14■□□□□ 0.49
PRKCSH-219ENST00000593101 GOLGA8BA8MQT2 603 aa18.13■□□□□ 0.49
PRKCSH-219ENST00000593101 NDUFB10O96000 172 aa18.13■□□□□ 0.49
PRKCSH-219ENST00000593101 GJA5P36382 358 aa18.13■□□□□ 0.49
PRKCSH-219ENST00000593101 HMGCS2P54868 508 aa18.13■□□□□ 0.49
PRKCSH-219ENST00000593101 TROAPQ12815 778 aa18.13■□□□□ 0.49
PRKCSH-219ENST00000593101 MKRN3Q13064 507 aaKnown RBP18.13■□□□□ 0.49
PRKCSH-219ENST00000593101 SPRYD7Q5W111 196 aa18.13■□□□□ 0.49
PRKCSH-219ENST00000593101 PAXIP1Q6ZW49 1069 aaPredicted RBP18.13■□□□□ 0.49
PRKCSH-219ENST00000593101 MICU3Q86XE3 530 aa18.13■□□□□ 0.49
PRKCSH-219ENST00000593101 CCDC144CPQ8IYA2 1237 aa18.13■□□□□ 0.49
PRKCSH-219ENST00000593101 SPICE1Q8N0Z3 855 aa18.13■□□□□ 0.49
PRKCSH-219ENST00000593101 FANCBQ8NB91 859 aa18.13■□□□□ 0.49
PRKCSH-219ENST00000593101 CTCFLQ8NI51 663 aaPredicted RBP18.13■□□□□ 0.49
PRKCSH-219ENST00000593101 CCDC102AQ96A19 550 aa18.13■□□□□ 0.49
PRKCSH-219ENST00000593101 HHIPL1Q96JK4 782 aa18.13■□□□□ 0.49
PRKCSH-219ENST00000593101 EMILIN3Q9NT22 766 aa18.13■□□□□ 0.49
PRKCSH-219ENST00000593101 ISY1Q9ULR0 285 aaKnown RBP18.13■□□□□ 0.49
PRKCSH-219ENST00000593101 KCNH4Q9UQ05 1017 aa18.13■□□□□ 0.49
PRKCSH-219ENST00000593101 RBM19Q9Y4C8 960 aaKnown RBP18.13■□□□□ 0.49
PRKCSH-219ENST00000593101 GOLGA8AA7E2F4 631 aa18.12■□□□□ 0.49
PRKCSH-219ENST00000593101 PARP1P09874 1014 aaKnown RBP18.12■□□□□ 0.49
PRKCSH-219ENST00000593101 ZBTB48P10074 688 aaPredicted RBP18.12■□□□□ 0.49
PRKCSH-219ENST00000593101 PDHBP11177 359 aa18.12■□□□□ 0.49
PRKCSH-219ENST00000593101 RXRAP19793 462 aa18.12■□□□□ 0.49
PRKCSH-219ENST00000593101 SLC1A4P43007 532 aa18.12■□□□□ 0.49
PRKCSH-219ENST00000593101 METAP2P50579 478 aaKnown RBP eCLIP18.12■□□□□ 0.491e-13■■■□□ 15.3
PRKCSH-219ENST00000593101 CCT2P78371 535 aaKnown RBP18.12■□□□□ 0.49
PRKCSH-219ENST00000593101 SNAPC2Q13487 334 aa18.12■□□□□ 0.49
PRKCSH-219ENST00000593101 ME3Q16798 604 aa18.12■□□□□ 0.49
PRKCSH-219ENST00000593101 CCDC96Q2M329 555 aa18.12■□□□□ 0.49
PRKCSH-219ENST00000593101 DEFB115Q30KQ5 88 aa18.12■□□□□ 0.49
PRKCSH-219ENST00000593101 SH3D19Q5HYK7 790 aa18.12■□□□□ 0.49
PRKCSH-219ENST00000593101 HSCBQ8IWL3 235 aa18.12■□□□□ 0.49
PRKCSH-219ENST00000593101 DCAF4Q8WV16 495 aa18.12■□□□□ 0.49
PRKCSH-219ENST00000593101 LPAR1Q92633 364 aa18.12■□□□□ 0.49
PRKCSH-219ENST00000593101 MAP3K14Q99558 947 aa18.12■□□□□ 0.49
PRKCSH-219ENST00000593101 PHIPQ8WWQ0 1821 aa18.12■□□□□ 0.49
PRKCSH-219ENST00000593101 BMP3P12645 472 aa18.11■□□□□ 0.49
PRKCSH-219ENST00000593101 KIF5BP33176 963 aa18.11■□□□□ 0.49
PRKCSH-219ENST00000593101 ANP32AP39687 249 aaKnown RBP18.11■□□□□ 0.49
PRKCSH-219ENST00000593101 GTF2A2P52657 109 aa18.11■□□□□ 0.49
PRKCSH-219ENST00000593101 RCAN1P53805 252 aa18.11■□□□□ 0.49
PRKCSH-219ENST00000593101 DGKZQ13574 1117 aa18.11■□□□□ 0.49
PRKCSH-219ENST00000593101 GRM4Q14833 912 aa18.11■□□□□ 0.49
PRKCSH-219ENST00000593101 PPP2R5BQ15173 497 aa18.11■□□□□ 0.49
PRKCSH-219ENST00000593101 RTN1Q16799 776 aa18.11■□□□□ 0.49
PRKCSH-219ENST00000593101 KIAA1755Q5JYT7 1200 aa18.11■□□□□ 0.49
PRKCSH-219ENST00000593101 GADL1Q6ZQY3 521 aa18.11■□□□□ 0.49
PRKCSH-219ENST00000593101 FASTKD5Q7L8L6 764 aaKnown RBP18.11■□□□□ 0.49
PRKCSH-219ENST00000593101 RASAL3Q86YV0 1011 aa18.11■□□□□ 0.49
PRKCSH-219ENST00000593101 GMCL1Q96IK5 515 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms