RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 SALL2Q9Y467 1007 aaPredicted RBP10.67□□□□□ -0.7
SMAD4-215ENST00000592911 TACC3Q9Y6A5 838 aa10.67□□□□□ -0.7
SMAD4-215ENST00000592911 SLURP2P0DP57 97 aa10.66□□□□□ -0.7
SMAD4-215ENST00000592911 SHHQ15465 462 aa10.66□□□□□ -0.7
SMAD4-215ENST00000592911 GORABQ5T7V8 394 aa10.66□□□□□ -0.7
SMAD4-215ENST00000592911 NAA16Q6N069 864 aaPredicted RBP10.66□□□□□ -0.7
SMAD4-215ENST00000592911 CCDC174Q6PII3 467 aa10.66□□□□□ -0.7
SMAD4-215ENST00000592911 SH3RF3Q8TEJ3 882 aaPredicted RBP10.66□□□□□ -0.7
SMAD4-215ENST00000592911 PAGR1Q9BTK6 254 aa10.66□□□□□ -0.7
SMAD4-215ENST00000592911 PDLIM7Q9NR12 457 aa10.66□□□□□ -0.7
SMAD4-215ENST00000592911 HOXC10Q9NYD6 342 aa10.66□□□□□ -0.7
SMAD4-215ENST00000592911 ARIH1Q9Y4X5 557 aaPredicted RBP10.66□□□□□ -0.7
SMAD4-215ENST00000592911 MYH8P13535 1937 aa10.65□□□□□ -0.7
SMAD4-215ENST00000592911 TNFRSF10AO00220 468 aa10.65□□□□□ -0.7
SMAD4-215ENST00000592911 SRGAP3O43295 1099 aa10.65□□□□□ -0.7
SMAD4-215ENST00000592911 GTPBP6O43824 516 aaPredicted RBP10.65□□□□□ -0.7
SMAD4-215ENST00000592911 CNMDO75829 334 aa10.65□□□□□ -0.7
SMAD4-215ENST00000592911 MCAMP43121 646 aa10.65□□□□□ -0.7
SMAD4-215ENST00000592911 IER5LQ5T953 404 aa10.65□□□□□ -0.7
SMAD4-215ENST00000592911 FBXO22Q8NEZ5 403 aa10.65□□□□□ -0.7
SMAD4-215ENST00000592911 ATXN2LQ8WWM7 1075 aaKnown RBP10.65□□□□□ -0.7
SMAD4-215ENST00000592911 TOX2Q96NM4 488 aa10.65□□□□□ -0.7
SMAD4-215ENST00000592911 FEZ1Q99689 392 aa10.65□□□□□ -0.7
SMAD4-215ENST00000592911 TTYH1Q9H313 450 aaPredicted RBP10.65□□□□□ -0.7
SMAD4-215ENST00000592911 SMC4Q9NTJ3 1288 aa10.65□□□□□ -0.7
SMAD4-215ENST00000592911 FLRT1Q9NZU1 646 aa10.65□□□□□ -0.7
SMAD4-215ENST00000592911 SERPINB13Q9UIV8 391 aa10.65□□□□□ -0.7
SMAD4-215ENST00000592911 PA2G4Q9UQ80 394 aaKnown RBP10.65□□□□□ -0.7
SMAD4-215ENST00000592911 MYO5AQ9Y4I1 1855 aaKnown RBP10.65□□□□□ -0.7
SMAD4-215ENST00000592911 PLXNA1Q9UIW2 1896 aa10.64□□□□□ -0.71
SMAD4-215ENST00000592911 PARP14Q460N5 1801 aa10.64□□□□□ -0.71
SMAD4-215ENST00000592911 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.64□□□□□ -0.71
SMAD4-215ENST00000592911 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.64□□□□□ -0.71
SMAD4-215ENST00000592911 KIAA0355O15063 1070 aa10.64□□□□□ -0.71
SMAD4-215ENST00000592911 VCAM1P19320 739 aa10.64□□□□□ -0.71
SMAD4-215ENST00000592911 CNGA1P29973 690 aa10.64□□□□□ -0.71
SMAD4-215ENST00000592911 TFCP2Q12800 502 aa10.64□□□□□ -0.71
SMAD4-215ENST00000592911 CCDC158Q5M9N0 1113 aa10.64□□□□□ -0.71
SMAD4-215ENST00000592911 AKNAD1Q5T1N1 836 aa10.64□□□□□ -0.71
SMAD4-215ENST00000592911 POTEEQ6S8J3 1075 aa10.64□□□□□ -0.71
SMAD4-215ENST00000592911 DPP9Q86TI2 863 aa10.64□□□□□ -0.71
SMAD4-215ENST00000592911 TTC6Q86TZ1 520 aa10.64□□□□□ -0.71
SMAD4-215ENST00000592911 TGFBRAP1Q8WUH2 860 aa10.64□□□□□ -0.71
SMAD4-215ENST00000592911 FAM161BQ96MY7 647 aa10.64□□□□□ -0.71
SMAD4-215ENST00000592911 NEUROD6Q96NK8 337 aa10.64□□□□□ -0.71
SMAD4-215ENST00000592911 MROH8Q9H579 483 aa10.64□□□□□ -0.71
SMAD4-215ENST00000592911 AATFQ9NY61 560 aaKnown RBP eCLIP10.64□□□□□ -0.71
SMAD4-215ENST00000592911 PHF24Q9UPV7 400 aa10.64□□□□□ -0.71
SMAD4-215ENST00000592911 ATP11BQ9Y2G3 1177 aa10.64□□□□□ -0.71
SMAD4-215ENST00000592911 PIEZO1Q92508 2521 aa10.64□□□□□ -0.71
SMAD4-215ENST00000592911 BDP1A6H8Y1 2624 aa10.63□□□□□ -0.71
SMAD4-215ENST00000592911 SPDYE16A6NNV3 312 aaPredicted RBP10.63□□□□□ -0.71
SMAD4-215ENST00000592911 GH2P01242 217 aa10.63□□□□□ -0.71
SMAD4-215ENST00000592911 CLTBP09497 229 aa10.63□□□□□ -0.71
SMAD4-215ENST00000592911 COPB2P35606 906 aa10.63□□□□□ -0.71
SMAD4-215ENST00000592911 IRX5P78411 483 aaPredicted RBP10.63□□□□□ -0.71
SMAD4-215ENST00000592911 SLFN5Q08AF3 891 aa10.63□□□□□ -0.71
SMAD4-215ENST00000592911 COG2Q14746 738 aa10.63□□□□□ -0.71
SMAD4-215ENST00000592911 C9orf50Q5SZB4 431 aa10.63□□□□□ -0.71
SMAD4-215ENST00000592911 MSL3Q8N5Y2 521 aaKnown RBP10.63□□□□□ -0.71
SMAD4-215ENST00000592911 MYLIPQ8WY64 445 aa10.63□□□□□ -0.71
SMAD4-215ENST00000592911 SLC39A7Q92504 469 aa10.63□□□□□ -0.71
SMAD4-215ENST00000592911 BADQ92934 168 aa10.63□□□□□ -0.71
SMAD4-215ENST00000592911 RNPC3Q96LT9 517 aaKnown RBP10.63□□□□□ -0.71
SMAD4-215ENST00000592911 TSEN34Q9BSV6 310 aaKnown RBP10.63□□□□□ -0.71
SMAD4-215ENST00000592911 CABP5Q9NP86 173 aa10.63□□□□□ -0.71
SMAD4-215ENST00000592911 DIS3Q9Y2L1 958 aaKnown RBP10.63□□□□□ -0.71
SMAD4-215ENST00000592911 MROH7Q68CQ1 1323 aa10.62□□□□□ -0.71
SMAD4-215ENST00000592911 GDF11O95390 407 aa10.62□□□□□ -0.71
SMAD4-215ENST00000592911 SLC25A27O95847 323 aa10.62□□□□□ -0.71
SMAD4-215ENST00000592911 C7P10643 843 aa10.62□□□□□ -0.71
SMAD4-215ENST00000592911 ADORA2AP29274 412 aa10.62□□□□□ -0.71
SMAD4-215ENST00000592911 CYP2C19P33261 490 aa10.62□□□□□ -0.71
SMAD4-215ENST00000592911 JAG1P78504 1218 aa10.62□□□□□ -0.71
SMAD4-215ENST00000592911 G3BP1Q13283 466 aaKnown RBP eCLIP10.62□□□□□ -0.71
SMAD4-215ENST00000592911 LRRC41Q15345 812 aa10.62□□□□□ -0.71
SMAD4-215ENST00000592911 TRIM60Q495X7 471 aa10.62□□□□□ -0.71
SMAD4-215ENST00000592911 CERKLQ49MI3 558 aaPredicted RBP10.62□□□□□ -0.71
SMAD4-215ENST00000592911 TBC1D9Q6ZT07 1266 aa10.62□□□□□ -0.71
SMAD4-215ENST00000592911 ANKRD33Q7Z3H0 272 aa10.62□□□□□ -0.71
SMAD4-215ENST00000592911 RNF180Q86T96 592 aa10.62□□□□□ -0.71
SMAD4-215ENST00000592911 MAPKAPK5Q8IW41 473 aa10.62□□□□□ -0.71
SMAD4-215ENST00000592911 TRPV1Q8NER1 839 aa10.62□□□□□ -0.71
SMAD4-215ENST00000592911 NPLOC4Q8TAT6 608 aa10.62□□□□□ -0.71
SMAD4-215ENST00000592911 SPATC1LQ9H0A9 340 aa10.62□□□□□ -0.71
SMAD4-215ENST00000592911 PRDM5Q9NQX1 630 aaPredicted RBP10.62□□□□□ -0.71
SMAD4-215ENST00000592911 PALD1Q9ULE6 856 aa10.62□□□□□ -0.71
SMAD4-215ENST00000592911 RARBP10826 455 aa10.61□□□□□ -0.71
SMAD4-215ENST00000592911 COL9A1P20849 921 aa10.61□□□□□ -0.71
SMAD4-215ENST00000592911 FPGSQ05932 587 aa10.61□□□□□ -0.71
SMAD4-215ENST00000592911 ABCB5Q2M3G0 1257 aa10.61□□□□□ -0.71
SMAD4-215ENST00000592911 GJC2Q5T442 439 aaPredicted RBP10.61□□□□□ -0.71
SMAD4-215ENST00000592911 WDR78Q5VTH9 848 aa10.61□□□□□ -0.71
SMAD4-215ENST00000592911 TRMT2AQ8IZ69 625 aaKnown RBP10.61□□□□□ -0.71
SMAD4-215ENST00000592911 SPRYD3Q8NCJ5 442 aa10.61□□□□□ -0.71
SMAD4-215ENST00000592911 MEIS3Q99687 375 aa10.61□□□□□ -0.71
SMAD4-215ENST00000592911 SH2D4AQ9H788 454 aa10.61□□□□□ -0.71
SMAD4-215ENST00000592911 BTBD7Q9P203 1132 aa10.61□□□□□ -0.71
SMAD4-215ENST00000592911 METRNQ9UJH8 293 aa10.61□□□□□ -0.71
SMAD4-215ENST00000592911 NAV1Q8NEY1 1877 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms