RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 SERPINB2P05120 415 aa21.88■■□□□ 1.09
PRKCSH-209ENST00000589838 SLC27A3Q5K4L6 730 aa21.88■■□□□ 1.09
PRKCSH-209ENST00000589838 C16orf45Q96MC5 204 aaPredicted RBP21.88■■□□□ 1.09
PRKCSH-209ENST00000589838 LRRC4BQ9NT99 713 aa21.88■■□□□ 1.09
PRKCSH-209ENST00000589838 UFL1O94874 794 aa21.87■■□□□ 1.09
PRKCSH-209ENST00000589838 SFPQP23246 707 aaKnown RBP eCLIP21.87■■□□□ 1.09
PRKCSH-209ENST00000589838 MORC3Q14149 939 aa21.87■■□□□ 1.09
PRKCSH-209ENST00000589838 NPY5RQ15761 445 aa21.87■■□□□ 1.09
PRKCSH-209ENST00000589838 PNMA1Q8ND90 353 aa21.87■■□□□ 1.09
PRKCSH-209ENST00000589838 HSD3B7Q9H2F3 369 aa21.87■■□□□ 1.09
PRKCSH-209ENST00000589838 CD209Q9NNX6 404 aa21.87■■□□□ 1.09
PRKCSH-209ENST00000589838 FAM205CA6NFA0 338 aa21.86■■□□□ 1.09
PRKCSH-209ENST00000589838 FOXN1O15353 648 aa21.86■■□□□ 1.09
PRKCSH-209ENST00000589838 TSPY3P0CV98 308 aa21.86■■□□□ 1.09
PRKCSH-209ENST00000589838 TSPY8P0CW00 308 aa21.86■■□□□ 1.09
PRKCSH-209ENST00000589838 GYS1P13807 737 aa21.86■■□□□ 1.09
PRKCSH-209ENST00000589838 IL1R1P14778 569 aa21.86■■□□□ 1.09
PRKCSH-209ENST00000589838 KCNJ6P48051 423 aa21.86■■□□□ 1.09
PRKCSH-209ENST00000589838 EARS2Q5JPH6 523 aaKnown RBP21.86■■□□□ 1.09
PRKCSH-209ENST00000589838 FAM177A1Q8N128 213 aaPredicted RBP21.86■■□□□ 1.09
PRKCSH-209ENST00000589838 PDILTQ8N807 584 aa21.86■■□□□ 1.09
PRKCSH-209ENST00000589838 TGFBRAP1Q8WUH2 860 aa21.86■■□□□ 1.09
PRKCSH-209ENST00000589838 SLFN14P0C7P3 912 aa21.86■■□□□ 1.09
PRKCSH-209ENST00000589838 ATP2C1P98194 919 aaPredicted RBP21.86■■□□□ 1.09
PRKCSH-209ENST00000589838 GRM4Q14833 912 aa21.86■■□□□ 1.09
PRKCSH-209ENST00000589838 SPATA20Q8TB22 786 aa21.86■■□□□ 1.09
PRKCSH-209ENST00000589838 ENOX1Q8TC92 643 aaKnown RBP21.86■■□□□ 1.09
PRKCSH-209ENST00000589838 KIF2AO00139 706 aaPredicted RBP21.85■■□□□ 1.09
PRKCSH-209ENST00000589838 RIOK3O14730 519 aaKnown RBP21.85■■□□□ 1.09
PRKCSH-209ENST00000589838 RBM10P98175 930 aaKnown RBP21.85■■□□□ 1.09
PRKCSH-209ENST00000589838 DIXDC1Q155Q3 683 aa21.85■■□□□ 1.09
PRKCSH-209ENST00000589838 ZNF174Q15697 407 aa21.85■■□□□ 1.09
PRKCSH-209ENST00000589838 TMC4Q7Z404 712 aa21.85■■□□□ 1.09
PRKCSH-209ENST00000589838 TBC1D22AQ8WUA7 517 aa21.85■■□□□ 1.09
PRKCSH-209ENST00000589838 LZTS2Q9BRK4 669 aa21.85■■□□□ 1.09
PRKCSH-209ENST00000589838 IL17RBQ9NRM6 502 aa21.85■■□□□ 1.09
PRKCSH-209ENST00000589838 FANCLQ9NW38 375 aa21.85■■□□□ 1.09
PRKCSH-209ENST00000589838 PODXL2Q9NZ53 605 aa21.85■■□□□ 1.09
PRKCSH-209ENST00000589838 ATP1A3P13637 1013 aa21.84■■□□□ 1.09
PRKCSH-209ENST00000589838 BMP6P22004 513 aa21.84■■□□□ 1.09
PRKCSH-209ENST00000589838 PTPN14Q15678 1187 aa21.84■■□□□ 1.09
PRKCSH-209ENST00000589838 CFAP100Q494V2 611 aa21.84■■□□□ 1.09
PRKCSH-209ENST00000589838 DYNLL2Q96FJ2 89 aa21.84■■□□□ 1.09
PRKCSH-209ENST00000589838 RTFDC1Q9BY42 306 aaPredicted RBP21.84■■□□□ 1.09
PRKCSH-209ENST00000589838 GPR75-ASB3A0A0A6YYF3 556 aa21.83■■□□□ 1.09
PRKCSH-209ENST00000589838 PRR29P0C7W0 189 aa21.83■■□□□ 1.09
PRKCSH-209ENST00000589838 ERCC5P28715 1186 aaPredicted RBP21.83■■□□□ 1.09
PRKCSH-209ENST00000589838 HOXA10P31260 410 aaPredicted RBP21.83■■□□□ 1.09
PRKCSH-209ENST00000589838 PTGDRQ13258 359 aa21.83■■□□□ 1.09
PRKCSH-209ENST00000589838 GALNT17Q6IS24 598 aa21.83■■□□□ 1.09
PRKCSH-209ENST00000589838 CCAR2Q8N163 923 aaKnown RBP21.83■■□□□ 1.09
PRKCSH-209ENST00000589838 SYMPKQ92797 1274 aaKnown RBP21.83■■□□□ 1.09
PRKCSH-209ENST00000589838 DHX58Q96C10 678 aa21.83■■□□□ 1.09
PRKCSH-209ENST00000589838 CRAMP1Q96RY5 1269 aa21.83■■□□□ 1.09
PRKCSH-209ENST00000589838 CEP135Q66GS9 1140 aa21.83■■□□□ 1.08
PRKCSH-209ENST00000589838 USP49Q70CQ1 688 aa21.83■■□□□ 1.08
PRKCSH-209ENST00000589838 BLIDQ8IZY5 108 aa21.83■■□□□ 1.08
PRKCSH-209ENST00000589838 CCDC112Q8NEF3 446 aa21.83■■□□□ 1.08
PRKCSH-209ENST00000589838 FAM163AQ96GL9 167 aaPredicted RBP21.83■■□□□ 1.08
PRKCSH-209ENST00000589838 BTDP43251 543 aa21.82■■□□□ 1.08
PRKCSH-209ENST00000589838 PLCD1P51178 756 aa21.82■■□□□ 1.08
PRKCSH-209ENST00000589838 ARL6IP4Q66PJ3 421 aaKnown RBP21.82■■□□□ 1.08
PRKCSH-209ENST00000589838 ARMCX5Q6P1M9 558 aa21.82■■□□□ 1.08
PRKCSH-209ENST00000589838 PIK3AP1Q6ZUJ8 805 aa21.82■■□□□ 1.08
PRKCSH-209ENST00000589838 SH3RF1Q7Z6J0 888 aa21.82■■□□□ 1.08
PRKCSH-209ENST00000589838 CCDC148Q8NFR7 591 aa21.82■■□□□ 1.08
PRKCSH-209ENST00000589838 EPSTI1Q96J88 318 aa21.82■■□□□ 1.08
PRKCSH-209ENST00000589838 CDK5RAP2Q96SN8 1893 aa21.82■■□□□ 1.08
PRKCSH-209ENST00000589838 PSDA5PKW4 1024 aaPredicted RBP21.81■■□□□ 1.08
PRKCSH-209ENST00000589838 CCP110O43303 1012 aa21.81■■□□□ 1.08
PRKCSH-209ENST00000589838 CDK11BP21127 795 aaKnown RBP21.81■■□□□ 1.08
PRKCSH-209ENST00000589838 GRIK5Q16478 980 aa21.81■■□□□ 1.08
PRKCSH-209ENST00000589838 VSTM4Q8IW00 320 aa21.81■■□□□ 1.08
PRKCSH-209ENST00000589838 PAGE5Q96GU1 130 aa21.81■■□□□ 1.08
PRKCSH-209ENST00000589838 GSDMAQ96QA5 445 aa21.81■■□□□ 1.08
PRKCSH-209ENST00000589838 PCDHA4Q9UN74 947 aa21.81■■□□□ 1.08
PRKCSH-209ENST00000589838 TUBB4AP04350 444 aa21.81■■□□□ 1.08
PRKCSH-209ENST00000589838 SLC4A8Q2Y0W8 1093 aa21.81■■□□□ 1.08
PRKCSH-209ENST00000589838 NYAP1Q6ZVC0 841 aa21.81■■□□□ 1.08
PRKCSH-209ENST00000589838 MAPKAPK5Q8IW41 473 aa21.81■■□□□ 1.08
PRKCSH-209ENST00000589838 TEX11Q8IYF3 940 aa21.81■■□□□ 1.08
PRKCSH-209ENST00000589838 IQUBQ8NA54 791 aa21.81■■□□□ 1.08
PRKCSH-209ENST00000589838 GPR101Q96P66 508 aaPredicted RBP21.81■■□□□ 1.08
PRKCSH-209ENST00000589838 MAD2L2Q9UI95 211 aa21.81■■□□□ 1.08
PRKCSH-209ENST00000589838 VWA3AA6NCI4 1184 aa21.8■■□□□ 1.08
PRKCSH-209ENST00000589838 TOP1P11387 765 aaKnown RBP21.8■■□□□ 1.08
PRKCSH-209ENST00000589838 GRAMD1CQ8IYS0 662 aa21.8■■□□□ 1.08
PRKCSH-209ENST00000589838 NFE2L3Q9Y4A8 694 aa21.8■■□□□ 1.08
PRKCSH-209ENST00000589838 BAZ2BQ9UIF8 2168 aaKnown RBP21.8■■□□□ 1.08
PRKCSH-209ENST00000589838 USP17L3A6NCW0 530 aa21.79■■□□□ 1.08
PRKCSH-209ENST00000589838 USP17L4A6NCW7 530 aa21.79■■□□□ 1.08
PRKCSH-209ENST00000589838 RASA1P20936 1047 aa21.79■■□□□ 1.08
PRKCSH-209ENST00000589838 C16orf86Q6ZW13 317 aa21.79■■□□□ 1.08
PRKCSH-209ENST00000589838 USP17L1Q7RTZ2 530 aa21.79■■□□□ 1.08
PRKCSH-209ENST00000589838 CTIFO43310 598 aaKnown RBP21.79■■□□□ 1.08
PRKCSH-209ENST00000589838 LONP1P36776 959 aaKnown RBP21.79■■□□□ 1.08
PRKCSH-209ENST00000589838 DAGLBQ8NCG7 672 aa21.79■■□□□ 1.08
PRKCSH-209ENST00000589838 TBC1D16Q8TBP0 767 aa21.79■■□□□ 1.08
PRKCSH-209ENST00000589838 DPF2Q92785 391 aa21.79■■□□□ 1.08
PRKCSH-209ENST00000589838 TMEM47Q9BQJ4 181 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms