RNA–Protein interactions for RNA: ENST00000589050.1

RPRD1A-208, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best)

Gene RPRD1A, Length 1,022 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-208ENST00000589050 TMOD4Q9NZQ9 345 aa18.18■□□□□ 0.5
RPRD1A-208ENST00000589050 WDR19Q8NEZ3 1342 aa18.18■□□□□ 0.5
RPRD1A-208ENST00000589050 CCL15-CCL14A0A0B4J2E2 113 aa18.17■□□□□ 0.5
RPRD1A-208ENST00000589050 RAD21O60216 631 aa18.17■□□□□ 0.5
RPRD1A-208ENST00000589050 TOP1P11387 765 aaKnown RBP18.17■□□□□ 0.5
RPRD1A-208ENST00000589050 RPS6KB1P23443 525 aa18.17■□□□□ 0.5
RPRD1A-208ENST00000589050 KIF23Q02241 960 aaPredicted RBP18.17■□□□□ 0.5
RPRD1A-208ENST00000589050 DGKZQ13574 1117 aa18.17■□□□□ 0.5
RPRD1A-208ENST00000589050 WTAPQ15007 396 aa18.17■□□□□ 0.5
RPRD1A-208ENST00000589050 SEC23AQ15436 765 aa18.17■□□□□ 0.5
RPRD1A-208ENST00000589050 CCL15Q16663 113 aa18.17■□□□□ 0.5
RPRD1A-208ENST00000589050 SH3D19Q5HYK7 790 aa18.17■□□□□ 0.5
RPRD1A-208ENST00000589050 IFIT1BQ5T764 474 aaKnown RBP18.17■□□□□ 0.5
RPRD1A-208ENST00000589050 GADL1Q6ZQY3 521 aa18.17■□□□□ 0.5
RPRD1A-208ENST00000589050 RUFY3Q7L099 469 aa18.17■□□□□ 0.5
RPRD1A-208ENST00000589050 IGDCC4Q8TDY8 1250 aa18.17■□□□□ 0.5
RPRD1A-208ENST00000589050 ANKS1AQ92625 1134 aa18.17■□□□□ 0.5
RPRD1A-208ENST00000589050 IL17RAQ96F46 866 aa18.17■□□□□ 0.5
RPRD1A-208ENST00000589050 TMEM87BQ96K49 555 aa18.17■□□□□ 0.5
RPRD1A-208ENST00000589050 TBC1D32Q96NH3 1257 aa18.17■□□□□ 0.5
RPRD1A-208ENST00000589050 ZIC5Q96T25 663 aa18.17■□□□□ 0.5
RPRD1A-208ENST00000589050 MTA3Q9BTC8 594 aa18.17■□□□□ 0.5
RPRD1A-208ENST00000589050 UPF3BQ9BZI7 483 aaKnown RBP18.17■□□□□ 0.5
RPRD1A-208ENST00000589050 GOPCQ9HD26 462 aa18.17■□□□□ 0.5
RPRD1A-208ENST00000589050 CYP46A1Q9Y6A2 500 aa18.17■□□□□ 0.5
RPRD1A-208ENST00000589050 PHIPQ8WWQ0 1821 aa18.16■□□□□ 0.5
RPRD1A-208ENST00000589050 SH2B2O14492 632 aaPredicted RBP18.16■□□□□ 0.5
RPRD1A-208ENST00000589050 FASTKD5Q7L8L6 764 aaKnown RBP18.16■□□□□ 0.5
RPRD1A-208ENST00000589050 VCPKMTQ9H867 229 aa18.16■□□□□ 0.5
RPRD1A-208ENST00000589050 KAT14Q9H8E8 782 aa18.16■□□□□ 0.5
RPRD1A-208ENST00000589050 GPHNQ9NQX3 736 aaPredicted RBP18.16■□□□□ 0.5
RPRD1A-208ENST00000589050 EMILIN3Q9NT22 766 aa18.16■□□□□ 0.5
RPRD1A-208ENST00000589050 SYNPO2Q9UMS6 1093 aa18.16■□□□□ 0.5
RPRD1A-208ENST00000589050 FGD1P98174 961 aa18.15■□□□□ 0.5
RPRD1A-208ENST00000589050 SREBF2Q12772 1141 aa18.15■□□□□ 0.5
RPRD1A-208ENST00000589050 SPICE1Q8N0Z3 855 aa18.15■□□□□ 0.5
RPRD1A-208ENST00000589050 PROCA1Q8NCQ7 364 aaPredicted RBP18.15■□□□□ 0.5
RPRD1A-208ENST00000589050 BRI3BPQ8WY22 251 aa18.15■□□□□ 0.5
RPRD1A-208ENST00000589050 C12orf42Q96LP6 360 aa18.15■□□□□ 0.5
RPRD1A-208ENST00000589050 LY9Q9HBG7 655 aa18.15■□□□□ 0.5
RPRD1A-208ENST00000589050 SENP2Q9HC62 589 aa18.15■□□□□ 0.5
RPRD1A-208ENST00000589050 TESPA1A2RU30 521 aaPredicted RBP18.14■□□□□ 0.49
RPRD1A-208ENST00000589050 F5H6K3 240 aa18.14■□□□□ 0.49
RPRD1A-208ENST00000589050 KLRC3Q07444 240 aa18.14■□□□□ 0.49
RPRD1A-208ENST00000589050 MOGSQ13724 837 aa18.14■□□□□ 0.49
RPRD1A-208ENST00000589050 KIAA1755Q5JYT7 1200 aa18.14■□□□□ 0.49
RPRD1A-208ENST00000589050 NFXL1Q6ZNB6 911 aa18.14■□□□□ 0.49
RPRD1A-208ENST00000589050 Q6ZUG5 572 aa18.14■□□□□ 0.49
RPRD1A-208ENST00000589050 PNMA1Q8ND90 353 aa18.14■□□□□ 0.49
RPRD1A-208ENST00000589050 GMCL1P1Q8NEA9 526 aa18.14■□□□□ 0.49
RPRD1A-208ENST00000589050 LPAR1Q92633 364 aa18.14■□□□□ 0.49
RPRD1A-208ENST00000589050 MTMR7Q9Y216 660 aa18.14■□□□□ 0.49
RPRD1A-208ENST00000589050 NDUFB10O96000 172 aa18.13■□□□□ 0.49
RPRD1A-208ENST00000589050 VCAM1P19320 739 aa18.13■□□□□ 0.49
RPRD1A-208ENST00000589050 MAP2K2P36507 400 aa18.13■□□□□ 0.49
RPRD1A-208ENST00000589050 LIFRP42702 1097 aa18.13■□□□□ 0.49
RPRD1A-208ENST00000589050 INHBEP58166 350 aa18.13■□□□□ 0.49
RPRD1A-208ENST00000589050 TREML2Q5T2D2 321 aa18.13■□□□□ 0.49
RPRD1A-208ENST00000589050 SLFN13Q68D06 897 aa18.13■□□□□ 0.49
RPRD1A-208ENST00000589050 TMTC2Q8N394 836 aa18.13■□□□□ 0.49
RPRD1A-208ENST00000589050 CHMP4CQ96CF2 233 aa18.13■□□□□ 0.49
RPRD1A-208ENST00000589050 KIF2CQ99661 725 aa18.13■□□□□ 0.49
RPRD1A-208ENST00000589050 PDRG1Q9NUG6 133 aa18.13■□□□□ 0.49
RPRD1A-208ENST00000589050 AGTPBP1Q9UPW5 1226 aa18.13■□□□□ 0.49
RPRD1A-208ENST00000589050 CCDC69A6NI79 296 aa18.12■□□□□ 0.49
RPRD1A-208ENST00000589050 BTBD19C9JJ37 291 aa18.12■□□□□ 0.49
RPRD1A-208ENST00000589050 GPAT2Q6NUI2 795 aa18.12■□□□□ 0.49
RPRD1A-208ENST00000589050 REM2Q8IYK8 340 aaPredicted RBP18.12■□□□□ 0.49
RPRD1A-208ENST00000589050 PTPN18Q99952 460 aa18.12■□□□□ 0.49
RPRD1A-208ENST00000589050 RPAP3Q9H6T3 665 aaPredicted RBP18.12■□□□□ 0.49
RPRD1A-208ENST00000589050 WDR46O15213 610 aaKnown RBP18.11■□□□□ 0.49
RPRD1A-208ENST00000589050 TM4SF4P48230 202 aa18.11■□□□□ 0.49
RPRD1A-208ENST00000589050 NEK4P51957 841 aa18.11■□□□□ 0.49
RPRD1A-208ENST00000589050 CATIPQ7Z7H3 387 aa18.11■□□□□ 0.49
RPRD1A-208ENST00000589050 ANKRD23Q86SG2 305 aa18.11■□□□□ 0.49
RPRD1A-208ENST00000589050 IFNL1Q8IU54 200 aa18.11■□□□□ 0.49
RPRD1A-208ENST00000589050 FAM43AQ8N2R8 423 aa18.11■□□□□ 0.49
RPRD1A-208ENST00000589050 DNAJC5GQ8N7S2 189 aa18.11■□□□□ 0.49
RPRD1A-208ENST00000589050 BRF1Q92994 677 aa18.11■□□□□ 0.49
RPRD1A-208ENST00000589050 NUP88Q99567 741 aaPredicted RBP18.11■□□□□ 0.49
RPRD1A-208ENST00000589050 ISY1Q9ULR0 285 aaKnown RBP18.11■□□□□ 0.49
RPRD1A-208ENST00000589050 PDHXO00330 501 aa18.1■□□□□ 0.49
RPRD1A-208ENST00000589050 IGF2BP3O00425 579 aaKnown RBP eCLIP18.1■□□□□ 0.49
RPRD1A-208ENST00000589050 SLC1A4P43007 532 aa18.1■□□□□ 0.49
RPRD1A-208ENST00000589050 PABPC4Q13310 644 aaKnown RBP eCLIP18.1■□□□□ 0.49
RPRD1A-208ENST00000589050 CCDC96Q2M329 555 aa18.1■□□□□ 0.49
RPRD1A-208ENST00000589050 FAM83BQ5T0W9 1011 aa18.1■□□□□ 0.49
RPRD1A-208ENST00000589050 OTUD7BQ6GQQ9 843 aa18.1■□□□□ 0.49
RPRD1A-208ENST00000589050 RASGRP2Q7LDG7 609 aa18.1■□□□□ 0.49
RPRD1A-208ENST00000589050 SGMS1Q86VZ5 419 aa18.1■□□□□ 0.49
RPRD1A-208ENST00000589050 ZNF654Q8IZM8 581 aa18.1■□□□□ 0.49
RPRD1A-208ENST00000589050 FBXL16Q8N461 479 aa18.1■□□□□ 0.49
RPRD1A-208ENST00000589050 DCAF4Q8WV16 495 aa18.1■□□□□ 0.49
RPRD1A-208ENST00000589050 GMCL1Q96IK5 515 aa18.1■□□□□ 0.49
RPRD1A-208ENST00000589050 TANGO6Q9C0B7 1094 aa18.1■□□□□ 0.49
RPRD1A-208ENST00000589050 SLC12A7Q9Y666 1083 aa18.1■□□□□ 0.49
RPRD1A-208ENST00000589050 LOC285556D6RIA3 1793 aa18.09■□□□□ 0.49
RPRD1A-208ENST00000589050 THSD7BQ9C0I4 1608 aa18.09■□□□□ 0.49
RPRD1A-208ENST00000589050 USP17L15C9J2P7 530 aa18.09■□□□□ 0.49
RPRD1A-208ENST00000589050 USP17L13C9JLJ4 530 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms