RNA–Protein interactions for RNA: ENST00000586499.5

TPM4-204, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-204ENST00000586499 ERVK-24P63145 666 aa22.74■■□□□ 1.23
TPM4-204ENST00000586499 NAPBQ9H115 298 aa22.74■■□□□ 1.23
TPM4-204ENST00000586499 PORCNQ9H237 461 aa22.74■■□□□ 1.23
TPM4-204ENST00000586499 OSBPL3Q9H4L5 887 aa22.74■■□□□ 1.23
TPM4-204ENST00000586499 BIN2Q9UBW5 565 aaPredicted RBP22.74■■□□□ 1.23
TPM4-204ENST00000586499 NMIQ13287 307 aaPredicted RBP22.73■■□□□ 1.23
TPM4-204ENST00000586499 VCPKMTQ9H867 229 aa22.73■■□□□ 1.23
TPM4-204ENST00000586499 KANSL2Q9H9L4 492 aa22.73■■□□□ 1.23
TPM4-204ENST00000586499 HELLSQ9NRZ9 838 aa22.73■■□□□ 1.23
TPM4-204ENST00000586499 GJD2Q9UKL4 321 aa22.73■■□□□ 1.23
TPM4-204ENST00000586499 KIAA0100Q14667 2235 aaKnown RBP22.72■■□□□ 1.23
TPM4-204ENST00000586499 SPDYE16A6NNV3 312 aaPredicted RBP22.72■■□□□ 1.23
TPM4-204ENST00000586499 TANGO6Q9C0B7 1094 aa22.72■■□□□ 1.23
TPM4-204ENST00000586499 BTBD7Q9P203 1132 aa22.72■■□□□ 1.23
TPM4-204ENST00000586499 RABGAP1Q9Y3P9 1069 aa22.72■■□□□ 1.23
TPM4-204ENST00000586499 PDE4AP27815 886 aa22.71■■□□□ 1.23
TPM4-204ENST00000586499 PPARAQ07869 468 aa22.71■■□□□ 1.23
TPM4-204ENST00000586499 IRF5Q13568 498 aa22.71■■□□□ 1.23
TPM4-204ENST00000586499 ZNF444Q8N0Y2 327 aaPredicted RBP22.71■■□□□ 1.23
TPM4-204ENST00000586499 SLAIN1Q8ND83 568 aa22.71■■□□□ 1.23
TPM4-204ENST00000586499 GTF3C2Q8WUA4 911 aaPredicted RBP22.71■■□□□ 1.23
TPM4-204ENST00000586499 SH2D4AQ9H788 454 aa22.71■■□□□ 1.23
TPM4-204ENST00000586499 INCENPQ9NQS7 918 aa22.71■■□□□ 1.23
TPM4-204ENST00000586499 COG2Q14746 738 aa22.7■■□□□ 1.22
TPM4-204ENST00000586499 MCMDC2Q4G0Z9 681 aa22.7■■□□□ 1.22
TPM4-204ENST00000586499 ZNF589Q86UQ0 364 aaPredicted RBP22.7■■□□□ 1.22
TPM4-204ENST00000586499 LPAR1Q92633 364 aa22.7■■□□□ 1.22
TPM4-204ENST00000586499 GREB1LQ9C091 1923 aaPredicted RBP22.69■■□□□ 1.22
TPM4-204ENST00000586499 RBBP6Q7Z6E9 1792 aaKnown RBP22.69■■□□□ 1.22
TPM4-204ENST00000586499 RAD21O60216 631 aa22.69■■□□□ 1.22
TPM4-204ENST00000586499 CCL5P13501 91 aa22.69■■□□□ 1.22
TPM4-204ENST00000586499 SDSP20132 328 aa22.69■■□□□ 1.22
TPM4-204ENST00000586499 CTDSPL2Q05D32 466 aa22.69■■□□□ 1.22
TPM4-204ENST00000586499 FAM47AQ5JRC9 791 aa22.69■■□□□ 1.22
TPM4-204ENST00000586499 LBX2Q6XYB7 198 aa22.69■■□□□ 1.22
TPM4-204ENST00000586499 CCAR1Q8IX12 1150 aaKnown RBP22.69■■□□□ 1.22
TPM4-204ENST00000586499 PXYLP1Q8TE99 480 aa22.69■■□□□ 1.22
TPM4-204ENST00000586499 MKI67P46013 3256 aaKnown RBP22.69■■□□□ 1.22
TPM4-204ENST00000586499 PLXNB2O15031 1838 aa22.68■■□□□ 1.22
TPM4-204ENST00000586499 INHAP05111 366 aa22.68■■□□□ 1.22
TPM4-204ENST00000586499 CYP2B6P20813 491 aa22.68■■□□□ 1.22
TPM4-204ENST00000586499 MAPK4P31152 587 aa22.68■■□□□ 1.22
TPM4-204ENST00000586499 SAMD1Q6SPF0 538 aaPredicted RBP22.68■■□□□ 1.22
TPM4-204ENST00000586499 GPR142Q7Z601 462 aa22.68■■□□□ 1.22
TPM4-204ENST00000586499 ZNF287Q9HBT7 754 aa22.68■■□□□ 1.22
TPM4-204ENST00000586499 HOXC10Q9NYD6 342 aa22.68■■□□□ 1.22
TPM4-204ENST00000586499 TACC3Q9Y6A5 838 aa22.68■■□□□ 1.22
TPM4-204ENST00000586499 RLFQ13129 1914 aa22.67■■□□□ 1.22
TPM4-204ENST00000586499 IGKV6D-41A0A0C4DH26 115 aa22.67■■□□□ 1.22
TPM4-204ENST00000586499 FLOT1O75955 427 aa22.67■■□□□ 1.22
TPM4-204ENST00000586499 UBXN2AP68543 259 aa22.67■■□□□ 1.22
TPM4-204ENST00000586499 PDE4BQ07343 736 aa22.67■■□□□ 1.22
TPM4-204ENST00000586499 TICAM2Q86XR7 235 aa22.67■■□□□ 1.22
TPM4-204ENST00000586499 RNF208Q9H0X6 261 aa22.67■■□□□ 1.22
TPM4-204ENST00000586499 UNC93B1Q9H1C4 597 aa22.67■■□□□ 1.22
TPM4-204ENST00000586499 GOPCQ9HD26 462 aa22.67■■□□□ 1.22
TPM4-204ENST00000586499 CLIP2Q9UDT6 1046 aa22.67■■□□□ 1.22
TPM4-204ENST00000586499 WDR46O15213 610 aaKnown RBP22.66■■□□□ 1.22
TPM4-204ENST00000586499 FGAP02671 866 aa22.66■■□□□ 1.22
TPM4-204ENST00000586499 SLC3A2P08195 630 aaKnown RBP22.66■■□□□ 1.22
TPM4-204ENST00000586499 DSG3P32926 999 aa22.66■■□□□ 1.22
TPM4-204ENST00000586499 TFAP4Q01664 338 aa22.66■■□□□ 1.22
TPM4-204ENST00000586499 WDR78Q5VTH9 848 aa22.66■■□□□ 1.22
TPM4-204ENST00000586499 PLEKHH3Q7Z736 793 aa22.66■■□□□ 1.22
TPM4-204ENST00000586499 ATG4CQ96DT6 458 aa22.66■■□□□ 1.22
TPM4-204ENST00000586499 CEP95Q96GE4 821 aa22.66■■□□□ 1.22
TPM4-204ENST00000586499 NUDT12Q9BQG2 462 aa22.66■■□□□ 1.22
TPM4-204ENST00000586499 FBXO28Q9NVF7 368 aa22.66■■□□□ 1.22
TPM4-204ENST00000586499 NYAP2Q9P242 653 aa22.66■■□□□ 1.22
TPM4-204ENST00000586499 TSPY3P0CV98 308 aa22.65■■□□□ 1.22
TPM4-204ENST00000586499 TSPY8P0CW00 308 aa22.65■■□□□ 1.22
TPM4-204ENST00000586499 HSPD1P10809 573 aaKnown RBP22.65■■□□□ 1.22
TPM4-204ENST00000586499 CCNA1P78396 465 aa22.65■■□□□ 1.22
TPM4-204ENST00000586499 TRIM32Q13049 653 aa22.65■■□□□ 1.22
TPM4-204ENST00000586499 ALX1Q15699 326 aa22.65■■□□□ 1.22
TPM4-204ENST00000586499 FAM83BQ5T0W9 1011 aa22.65■■□□□ 1.22
TPM4-204ENST00000586499 NEDD1Q8NHV4 660 aa22.65■■□□□ 1.22
TPM4-204ENST00000586499 NUP88Q99567 741 aaPredicted RBP22.65■■□□□ 1.22
TPM4-204ENST00000586499 MTMR4Q9NYA4 1195 aa22.65■■□□□ 1.22
TPM4-204ENST00000586499 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.65■■□□□ 1.222e-6■■■■■ 29.8
TPM4-204ENST00000586499 CCDC171Q6TFL3 1326 aa22.64■■□□□ 1.22
TPM4-204ENST00000586499 F5H6K3 240 aa22.64■■□□□ 1.21
TPM4-204ENST00000586499 KLRC3Q07444 240 aa22.64■■□□□ 1.21
TPM4-204ENST00000586499 MORN1Q5T089 497 aa22.64■■□□□ 1.21
TPM4-204ENST00000586499 CWC27Q6UX04 472 aaKnown RBP22.64■■□□□ 1.21
TPM4-204ENST00000586499 USP6NLQ92738 828 aa22.64■■□□□ 1.21
TPM4-204ENST00000586499 CWC22Q9HCG8 908 aaKnown RBP22.64■■□□□ 1.21
TPM4-204ENST00000586499 ANAPC4Q9UJX5 808 aa22.64■■□□□ 1.21
TPM4-204ENST00000586499 TRIB2Q92519 343 aa22.63■■□□□ 1.21
TPM4-204ENST00000586499 SHISA4Q96DD7 197 aa22.63■■□□□ 1.21
TPM4-204ENST00000586499 MOV10L1Q9BXT6 1211 aaKnown RBP22.63■■□□□ 1.21
TPM4-204ENST00000586499 NDUFB10O96000 172 aa22.62■■□□□ 1.21
TPM4-204ENST00000586499 GJB1P08034 283 aa22.62■■□□□ 1.21
TPM4-204ENST00000586499 GSPT1P15170 499 aaKnown RBP22.62■■□□□ 1.21
TPM4-204ENST00000586499 CCL14Q16627 93 aa22.62■■□□□ 1.21
TPM4-204ENST00000586499 LRRC47Q8N1G4 583 aaKnown RBP22.62■■□□□ 1.21
TPM4-204ENST00000586499 SOCS4Q8WXH5 440 aa22.62■■□□□ 1.21
TPM4-204ENST00000586499 MKL1Q969V6 931 aa22.62■■□□□ 1.21
TPM4-204ENST00000586499 SPATC1LQ9H0A9 340 aa22.62■■□□□ 1.21
TPM4-204ENST00000586499 HMGCRP04035 888 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 554.2 ms