RNA–Protein interactions for RNA: ENST00000586144.1

CXXC1-203, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 474 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-203ENST00000586144 SBK1Q52WX2 424 aa17.8■□□□□ 0.44
CXXC1-203ENST00000586144 PRPF38BQ5VTL8 546 aaKnown RBP17.8■□□□□ 0.44
CXXC1-203ENST00000586144 SAMD1Q6SPF0 538 aaPredicted RBP17.8■□□□□ 0.44
CXXC1-203ENST00000586144 IFNL3Q8IZI9 196 aa17.8■□□□□ 0.44
CXXC1-203ENST00000586144 U2AF1L4Q8WU68 220 aaKnown RBP17.8■□□□□ 0.44
CXXC1-203ENST00000586144 TANGO6Q9C0B7 1094 aa17.8■□□□□ 0.44
CXXC1-203ENST00000586144 STAP2Q9UGK3 403 aa17.8■□□□□ 0.44
CXXC1-203ENST00000586144 TMX2Q9Y320 296 aa17.8■□□□□ 0.44
CXXC1-203ENST00000586144 RABGAP1Q9Y3P9 1069 aa17.8■□□□□ 0.44
CXXC1-203ENST00000586144 TDO2P48775 406 aa17.79■□□□□ 0.44
CXXC1-203ENST00000586144 IRX6P78412 446 aaPredicted RBP17.79■□□□□ 0.44
CXXC1-203ENST00000586144 MORN1Q5T089 497 aa17.79■□□□□ 0.44
CXXC1-203ENST00000586144 PLEKHH3Q7Z736 793 aa17.79■□□□□ 0.44
CXXC1-203ENST00000586144 USP6NLQ92738 828 aa17.79■□□□□ 0.44
CXXC1-203ENST00000586144 CCDC17Q96LX7 622 aa17.79■□□□□ 0.44
CXXC1-203ENST00000586144 DEFB118Q96PH6 123 aa17.79■□□□□ 0.44
CXXC1-203ENST00000586144 PATL2C9JE40 543 aaKnown RBP17.78■□□□□ 0.44
CXXC1-203ENST00000586144 MAPK4P31152 587 aa17.78■□□□□ 0.44
CXXC1-203ENST00000586144 WDR78Q5VTH9 848 aa17.78■□□□□ 0.44
CXXC1-203ENST00000586144 GIMAP6Q6P9H5 292 aa17.78■□□□□ 0.44
CXXC1-203ENST00000586144 GTF3C2Q8WUA4 911 aaPredicted RBP17.78■□□□□ 0.44
CXXC1-203ENST00000586144 NUDT12Q9BQG2 462 aa17.78■□□□□ 0.44
CXXC1-203ENST00000586144 VCPKMTQ9H867 229 aa17.78■□□□□ 0.44
CXXC1-203ENST00000586144 ARHGEF10LQ9HCE6 1279 aa17.78■□□□□ 0.44
CXXC1-203ENST00000586144 INCENPQ9NQS7 918 aa17.78■□□□□ 0.44
CXXC1-203ENST00000586144 ZBTB47Q9UFB7 747 aaPredicted RBP17.78■□□□□ 0.44
CXXC1-203ENST00000586144 GREB1LQ9C091 1923 aaPredicted RBP17.78■□□□□ 0.44
CXXC1-203ENST00000586144 ROBO3Q96MS0 1386 aa17.78■□□□□ 0.44
CXXC1-203ENST00000586144 RAD21O60216 631 aa17.77■□□□□ 0.44
CXXC1-203ENST00000586144 SGPL1O95470 568 aa17.77■□□□□ 0.44
CXXC1-203ENST00000586144 HMGCRP04035 888 aa17.77■□□□□ 0.44
CXXC1-203ENST00000586144 COG2Q14746 738 aa17.77■□□□□ 0.44
CXXC1-203ENST00000586144 VPS53Q5VIR6 699 aa17.77■□□□□ 0.44
CXXC1-203ENST00000586144 LBX2Q6XYB7 198 aa17.77■□□□□ 0.44
CXXC1-203ENST00000586144 UBE2Q1Q7Z7E8 422 aa17.77■□□□□ 0.44
CXXC1-203ENST00000586144 CCAR1Q8IX12 1150 aaKnown RBP17.77■□□□□ 0.44
CXXC1-203ENST00000586144 ATG4CQ96DT6 458 aa17.77■□□□□ 0.44
CXXC1-203ENST00000586144 MKNK2Q9HBH9 465 aa17.77■□□□□ 0.44
CXXC1-203ENST00000586144 PAK6Q9NQU5 681 aaPredicted RBP17.77■□□□□ 0.44
CXXC1-203ENST00000586144 FBXO28Q9NVF7 368 aa17.77■□□□□ 0.44
CXXC1-203ENST00000586144 TACC3Q9Y6A5 838 aa17.77■□□□□ 0.44
CXXC1-203ENST00000586144 FLOT1O75955 427 aa17.76■□□□□ 0.43
CXXC1-203ENST00000586144 GNAT2P19087 354 aa17.76■□□□□ 0.43
CXXC1-203ENST00000586144 DSG3P32926 999 aa17.76■□□□□ 0.43
CXXC1-203ENST00000586144 SMC5Q8IY18 1101 aa17.76■□□□□ 0.43
CXXC1-203ENST00000586144 FAM227BQ96M60 508 aa17.76■□□□□ 0.43
CXXC1-203ENST00000586144 NUP88Q99567 741 aaPredicted RBP17.76■□□□□ 0.43
CXXC1-203ENST00000586144 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.76■□□□□ 0.431e-6■■■■□ 26.6
CXXC1-203ENST00000586144 RWDD1Q9H446 243 aaPredicted RBP17.76■□□□□ 0.43
CXXC1-203ENST00000586144 KANSL2Q9H9L4 492 aa17.76■□□□□ 0.43
CXXC1-203ENST00000586144 FLRT1Q9NZU1 646 aa17.76■□□□□ 0.43
CXXC1-203ENST00000586144 PARP14Q460N5 1801 aa17.75■□□□□ 0.43
CXXC1-203ENST00000586144 TFRCP02786 760 aaKnown RBP17.75■□□□□ 0.43
CXXC1-203ENST00000586144 FAM47AQ5JRC9 791 aa17.75■□□□□ 0.43
CXXC1-203ENST00000586144 DIS3LQ8TF46 1054 aaKnown RBP17.75■□□□□ 0.43
CXXC1-203ENST00000586144 EVI5LQ96CN4 794 aa17.75■□□□□ 0.43
CXXC1-203ENST00000586144 MOV10L1Q9BXT6 1211 aaKnown RBP17.75■□□□□ 0.43
CXXC1-203ENST00000586144 CWC22Q9HCG8 908 aaKnown RBP17.75■□□□□ 0.43
CXXC1-203ENST00000586144 A0A0G2JMZ2 1700 aa17.75■□□□□ 0.43
CXXC1-203ENST00000586144 IGKV6D-41A0A0C4DH26 115 aa17.74■□□□□ 0.43
CXXC1-203ENST00000586144 A0A0D9SFI3 127 aa17.74■□□□□ 0.43
CXXC1-203ENST00000586144 RGS2P41220 211 aa17.74■□□□□ 0.43
CXXC1-203ENST00000586144 CTDSPL2Q05D32 466 aa17.74■□□□□ 0.43
CXXC1-203ENST00000586144 LRRFIP1Q32MZ4 808 aaKnown RBP17.74■□□□□ 0.43
CXXC1-203ENST00000586144 FAM83BQ5T0W9 1011 aa17.74■□□□□ 0.43
CXXC1-203ENST00000586144 NPLOC4Q8TAT6 608 aa17.74■□□□□ 0.43
CXXC1-203ENST00000586144 NKX2-3Q8TAU0 364 aa17.74■□□□□ 0.43
CXXC1-203ENST00000586144 SOCS4Q8WXH5 440 aa17.74■□□□□ 0.43
CXXC1-203ENST00000586144 LPAR1Q92633 364 aa17.74■□□□□ 0.43
CXXC1-203ENST00000586144 HOXC10Q9NYD6 342 aa17.74■□□□□ 0.43
CXXC1-203ENST00000586144 WDR46O15213 610 aaKnown RBP17.73■□□□□ 0.43
CXXC1-203ENST00000586144 FARP2O94887 1054 aaPredicted RBP17.73■□□□□ 0.43
CXXC1-203ENST00000586144 PRKAR2AP13861 404 aaKnown RBP17.73■□□□□ 0.43
CXXC1-203ENST00000586144 ZKSCAN1P17029 563 aaPredicted RBP17.73■□□□□ 0.43
CXXC1-203ENST00000586144 ERCC3P19447 782 aa17.73■□□□□ 0.43
CXXC1-203ENST00000586144 PTPREP23469 700 aa17.73■□□□□ 0.43
CXXC1-203ENST00000586144 CCND3P30281 292 aaPredicted RBP17.73■□□□□ 0.43
CXXC1-203ENST00000586144 CCNA1P78396 465 aa17.73■□□□□ 0.43
CXXC1-203ENST00000586144 NUCB1Q02818 461 aa17.73■□□□□ 0.43
CXXC1-203ENST00000586144 PPARAQ07869 468 aa17.73■□□□□ 0.43
CXXC1-203ENST00000586144 CACNB2Q08289 660 aaPredicted RBP17.73■□□□□ 0.43
CXXC1-203ENST00000586144 MAP2K5Q13163 448 aa17.73■□□□□ 0.43
CXXC1-203ENST00000586144 PLS1Q14651 629 aa17.73■□□□□ 0.43
CXXC1-203ENST00000586144 TMEM132BQ14DG7 1078 aa17.73■□□□□ 0.43
CXXC1-203ENST00000586144 MAP3K21Q5TCX8 1036 aa17.73■□□□□ 0.43
CXXC1-203ENST00000586144 CHD1LQ86WJ1 897 aa17.73■□□□□ 0.43
CXXC1-203ENST00000586144 PLEKHM2Q8IWE5 1019 aa17.73■□□□□ 0.43
CXXC1-203ENST00000586144 CHMP4CQ96CF2 233 aa17.73■□□□□ 0.43
CXXC1-203ENST00000586144 CEP95Q96GE4 821 aa17.73■□□□□ 0.43
CXXC1-203ENST00000586144 SPATC1LQ9H0A9 340 aa17.73■□□□□ 0.43
CXXC1-203ENST00000586144 CRISPLD2Q9H0B8 497 aa17.73■□□□□ 0.43
CXXC1-203ENST00000586144 NAPBQ9H115 298 aa17.73■□□□□ 0.43
CXXC1-203ENST00000586144 SH2D4AQ9H788 454 aa17.73■□□□□ 0.43
CXXC1-203ENST00000586144 CLIP2Q9UDT6 1046 aa17.73■□□□□ 0.43
CXXC1-203ENST00000586144 COL11A1P12107 1806 aaPredicted RBP17.72■□□□□ 0.43
CXXC1-203ENST00000586144 XRCC5P13010 732 aaKnown RBP17.72■□□□□ 0.43
CXXC1-203ENST00000586144 NMIQ13287 307 aaPredicted RBP17.72■□□□□ 0.43
CXXC1-203ENST00000586144 GRB14Q14449 540 aa17.72■□□□□ 0.43
CXXC1-203ENST00000586144 ZNF589Q86UQ0 364 aaPredicted RBP17.72■□□□□ 0.43
CXXC1-203ENST00000586144 LRRC47Q8N1G4 583 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 747.4 ms