RNA–Protein interactions for RNA: ENST00000584377.5

CSNK1D-222, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 2,891 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-222	ENST00000584377	ENOX1	Q8TC92	643 aa	Known RBP	15.06	■□□□□ 0
CSNK1D-222	ENST00000584377	LTBP4	Q8N2S1	1624 aa		15.05	■□□□□ 0
CSNK1D-222	ENST00000584377	TSPY2	A6NKD2	308 aa		15.05	■□□□□ 0
CSNK1D-222	ENST00000584377	CYP2C19	P33261	490 aa		15.05	■□□□□ 0
CSNK1D-222	ENST00000584377	NPY5R	Q15761	445 aa		15.05	■□□□□ 0
CSNK1D-222	ENST00000584377	PTPN21	Q16825	1174 aa		15.05	■□□□□ 0
CSNK1D-222	ENST00000584377	FBXO38	Q6PIJ6	1188 aa		15.05	■□□□□ 0
CSNK1D-222	ENST00000584377	DZIP1	Q86YF9	867 aa	Known RBP	15.05	■□□□□ 0
CSNK1D-222	ENST00000584377	TRMT44	Q8IYL2	757 aa	Known RBP	15.05	■□□□□ 0
CSNK1D-222	ENST00000584377	SPATA20	Q8TB22	786 aa		15.05	■□□□□ 0
CSNK1D-222	ENST00000584377	TNFRSF25	Q93038	417 aa		15.05	■□□□□ 0
CSNK1D-222	ENST00000584377	FERMT2	Q96AC1	680 aa		15.05	■□□□□ 0
CSNK1D-222	ENST00000584377	C8orf37	Q96NL8	207 aa		15.05	■□□□□ 0
CSNK1D-222	ENST00000584377	INTS13	Q9NVM9	706 aa		15.05	■□□□□ 0
CSNK1D-222	ENST00000584377	WNT7A	O00755	349 aa		15.05	■□□□□ -0
CSNK1D-222	ENST00000584377	NPHP1	O15259	732 aa		15.05	■□□□□ -0
CSNK1D-222	ENST00000584377	ZNF174	Q15697	407 aa		15.05	■□□□□ -0
CSNK1D-222	ENST00000584377	SBK1	Q52WX2	424 aa		15.05	■□□□□ -0
CSNK1D-222	ENST00000584377	SYMPK	Q92797	1274 aa	Known RBP	15.05	■□□□□ -0
CSNK1D-222	ENST00000584377	NGLY1	Q96IV0	654 aa		15.05	■□□□□ -0
CSNK1D-222	ENST00000584377	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	15.05	■□□□□ -0	2e-8	■■■□□ 16.1
CSNK1D-222	ENST00000584377	ZNF215	Q9UL58	517 aa	Predicted RBP	15.05	■□□□□ -0
CSNK1D-222	ENST00000584377	RTCB	Q9Y3I0	505 aa	Known RBP	15.05	■□□□□ -0
CSNK1D-222	ENST00000584377		V9GYY5	206 aa	Predicted RBP	15.05	■□□□□ -0
CSNK1D-222	ENST00000584377		A0A087X0B3	334 aa		15.04	■□□□□ -0
CSNK1D-222	ENST00000584377	ZNF18	P17022	549 aa		15.04	■□□□□ -0
CSNK1D-222	ENST00000584377	VPS72	Q15906	364 aa		15.04	■□□□□ -0
CSNK1D-222	ENST00000584377	NOM1	Q5C9Z4	860 aa	Known RBP	15.04	■□□□□ -0
CSNK1D-222	ENST00000584377	TTC38	Q5R3I4	469 aa		15.04	■□□□□ -0
CSNK1D-222	ENST00000584377	MCM9	Q9NXL9	1143 aa		15.04	■□□□□ -0
CSNK1D-222	ENST00000584377	TMED8	Q6PL24	325 aa	Predicted RBP	15.04	■□□□□ -0
CSNK1D-222	ENST00000584377	CCNL1	Q9UK58	526 aa	Predicted RBP	15.04	■□□□□ -0
CSNK1D-222	ENST00000584377	SCG2	P13521	617 aa		15.03	■□□□□ -0
CSNK1D-222	ENST00000584377	TM4SF1	P30408	202 aa		15.03	■□□□□ -0
CSNK1D-222	ENST00000584377	AFM	P43652	599 aa		15.03	■□□□□ -0
CSNK1D-222	ENST00000584377	PLCD1	P51178	756 aa		15.03	■□□□□ -0
CSNK1D-222	ENST00000584377	SLC4A8	Q2Y0W8	1093 aa		15.03	■□□□□ -0
CSNK1D-222	ENST00000584377	SPTY2D1	Q68D10	685 aa	Predicted RBP	15.03	■□□□□ -0
CSNK1D-222	ENST00000584377	TMX1	Q9H3N1	280 aa		15.03	■□□□□ -0
CSNK1D-222	ENST00000584377	CCP110	O43303	1012 aa		15.03	■□□□□ -0
CSNK1D-222	ENST00000584377	NLRP5	P59047	1200 aa		15.03	■□□□□ -0
CSNK1D-222	ENST00000584377	GOLGA8F	Q08AF8	430 aa		15.03	■□□□□ -0
CSNK1D-222	ENST00000584377	GOLGA8DP	Q0D2H9	430 aa		15.03	■□□□□ -0
CSNK1D-222	ENST00000584377	MYH13	Q9UKX3	1938 aa		15.03	■□□□□ -0
CSNK1D-222	ENST00000584377	DLEC1	Q9Y238	1755 aa		15.03	■□□□□ -0
CSNK1D-222	ENST00000584377	VWA3A	A6NCI4	1184 aa		15.03	■□□□□ -0
CSNK1D-222	ENST00000584377	USP17L8	P0C7I0	530 aa		15.03	■□□□□ -0
CSNK1D-222	ENST00000584377	ERCC5	P28715	1186 aa	Predicted RBP	15.03	■□□□□ -0
CSNK1D-222	ENST00000584377	PTGDR	Q13258	359 aa		15.03	■□□□□ -0
CSNK1D-222	ENST00000584377	SYT10	Q6XYQ8	523 aa		15.03	■□□□□ -0
CSNK1D-222	ENST00000584377	AMIGO3	Q86WK7	504 aa		15.03	■□□□□ -0
CSNK1D-222	ENST00000584377	ARHGEF1	Q92888	912 aa	Known RBP	15.03	■□□□□ -0
CSNK1D-222	ENST00000584377	MED15	Q96RN5	788 aa		15.03	■□□□□ -0
CSNK1D-222	ENST00000584377	BAZ2B	Q9UIF8	2168 aa	Known RBP	15.02	■□□□□ -0
CSNK1D-222	ENST00000584377	KIF5B	P33176	963 aa		15.02	■□□□□ -0
CSNK1D-222	ENST00000584377	RAD51AP2	Q09MP3	1159 aa		15.02	■□□□□ -0
CSNK1D-222	ENST00000584377	PFKFB3	Q16875	520 aa	Predicted RBP	15.02	■□□□□ -0
CSNK1D-222	ENST00000584377	PIK3AP1	Q6ZUJ8	805 aa		15.02	■□□□□ -0
CSNK1D-222	ENST00000584377	HOMER1	Q86YM7	354 aa		15.02	■□□□□ -0
CSNK1D-222	ENST00000584377	PAGE5	Q96GU1	130 aa		15.02	■□□□□ -0
CSNK1D-222	ENST00000584377	ANKIB1	Q9P2G1	1089 aa		15.02	■□□□□ -0
CSNK1D-222	ENST00000584377	TUBB4A	P04350	444 aa		15.02	□□□□□ -0.01
CSNK1D-222	ENST00000584377	ATP2C1	P98194	919 aa	Predicted RBP	15.02	□□□□□ -0.01
CSNK1D-222	ENST00000584377	ELF2	Q15723	593 aa		15.02	□□□□□ -0.01
CSNK1D-222	ENST00000584377	RCSD1	Q6JBY9	416 aa		15.02	□□□□□ -0.01
CSNK1D-222	ENST00000584377	SH3RF1	Q7Z6J0	888 aa		15.02	□□□□□ -0.01
CSNK1D-222	ENST00000584377	SAMSN1	Q9NSI8	373 aa	Known RBP	15.02	□□□□□ -0.01
CSNK1D-222	ENST00000584377	COL24A1	Q17RW2	1714 aa		15.02	□□□□□ -0.01
CSNK1D-222	ENST00000584377	IRS2	Q9Y4H2	1338 aa		15.01	□□□□□ -0.01
CSNK1D-222	ENST00000584377	SPECC1L	Q69YQ0	1117 aa		15.01	□□□□□ -0.01
CSNK1D-222	ENST00000584377	ZFP91	Q96JP5	570 aa	Predicted RBP	15.01	□□□□□ -0.01
CSNK1D-222	ENST00000584377	KAT14	Q9H8E8	782 aa		15.01	□□□□□ -0.01
CSNK1D-222	ENST00000584377	ZNF446	Q9NWS9	450 aa		15.01	□□□□□ -0.01
CSNK1D-222	ENST00000584377	LDHB	P07195	334 aa	Known RBP	15.01	□□□□□ -0.01
CSNK1D-222	ENST00000584377	CASP1	P29466	404 aa		15.01	□□□□□ -0.01
CSNK1D-222	ENST00000584377	USP5	P45974	858 aa		15.01	□□□□□ -0.01
CSNK1D-222	ENST00000584377	TFAP4	Q01664	338 aa		15.01	□□□□□ -0.01
CSNK1D-222	ENST00000584377	TBX2	Q13207	712 aa	Predicted RBP	15.01	□□□□□ -0.01
CSNK1D-222	ENST00000584377	ERO1A	Q96HE7	468 aa		15.01	□□□□□ -0.01
CSNK1D-222	ENST00000584377	LAMB1	P07942	1786 aa		15	□□□□□ -0.01
CSNK1D-222	ENST00000584377	TOM1	O60784	492 aa		15	□□□□□ -0.01
CSNK1D-222	ENST00000584377	SLU7	O95391	586 aa	Known RBP	15	□□□□□ -0.01
CSNK1D-222	ENST00000584377	VEGFA	P15692	232 aa	Predicted RBP	15	□□□□□ -0.01
CSNK1D-222	ENST00000584377	TRAPPC10	P48553	1259 aa		15	□□□□□ -0.01
CSNK1D-222	ENST00000584377	DPYD	Q12882	1025 aa		15	□□□□□ -0.01
CSNK1D-222	ENST00000584377	CT47A1	Q5JQC4	288 aa	Predicted RBP	15	□□□□□ -0.01
CSNK1D-222	ENST00000584377	FAM182B	Q5T319	152 aa		15	□□□□□ -0.01
CSNK1D-222	ENST00000584377	C12orf60	Q5U649	245 aa		15	□□□□□ -0.01
CSNK1D-222	ENST00000584377	KLHL10	Q6JEL2	608 aa		15	□□□□□ -0.01
CSNK1D-222	ENST00000584377	WDR66	Q8TBY9	1149 aa		15	□□□□□ -0.01
CSNK1D-222	ENST00000584377	GSDMA	Q96QA5	445 aa		15	□□□□□ -0.01
CSNK1D-222	ENST00000584377	ARHGAP6	O43182	974 aa		14.99	□□□□□ -0.01
CSNK1D-222	ENST00000584377	ETF1	P62495	437 aa	Known RBP	14.99	□□□□□ -0.01
CSNK1D-222	ENST00000584377	DGKH	Q86XP1	1220 aa		14.99	□□□□□ -0.01
CSNK1D-222	ENST00000584377	TMEM139	Q8IV31	216 aa		14.99	□□□□□ -0.01
CSNK1D-222	ENST00000584377	TEX2	Q8IWB9	1127 aa		14.99	□□□□□ -0.01
CSNK1D-222	ENST00000584377	L2HGDH	Q9H9P8	463 aa		14.99	□□□□□ -0.01
CSNK1D-222	ENST00000584377	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	14.99	□□□□□ -0.01
CSNK1D-222	ENST00000584377	MKRN1	Q9UHC7	482 aa	Known RBP	14.99	□□□□□ -0.01
CSNK1D-222	ENST00000584377	KIAA1551	Q9HCM1	1747 aa		14.99	□□□□□ -0.01

Retrieved 100 of 20,778 RNA–protein pairs in 49 ms