RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-222ENST00000583732 SAMD1Q6SPF0 538 aaPredicted RBP18.3■□□□□ 0.52
SREBF1-222ENST00000583732 NPLOC4Q8TAT6 608 aa18.3■□□□□ 0.52
SREBF1-222ENST00000583732 GDF15Q99988 308 aa18.3■□□□□ 0.52
SREBF1-222ENST00000583732 ZBTB40Q9NUA8 1239 aa18.3■□□□□ 0.52
SREBF1-222ENST00000583732 PARP14Q460N5 1801 aa18.29■□□□□ 0.52
SREBF1-222ENST00000583732 ZNF236Q9UL36 1845 aa18.29■□□□□ 0.52
SREBF1-222ENST00000583732 CHGBP05060 677 aa18.29■□□□□ 0.52
SREBF1-222ENST00000583732 CNGA1P29973 690 aa18.29■□□□□ 0.52
SREBF1-222ENST00000583732 ADD2P35612 726 aa18.29■□□□□ 0.52
SREBF1-222ENST00000583732 MAGEA10P43363 369 aaPredicted RBP18.29■□□□□ 0.52
SREBF1-222ENST00000583732 ATP2B2Q01814 1243 aa18.29■□□□□ 0.52
SREBF1-222ENST00000583732 GRB14Q14449 540 aa18.29■□□□□ 0.52
SREBF1-222ENST00000583732 LBX2Q6XYB7 198 aa18.29■□□□□ 0.52
SREBF1-222ENST00000583732 CYP2D7A0A087X1C5 515 aa18.28■□□□□ 0.52
SREBF1-222ENST00000583732 SMIM22K7EJ46 135 aa18.28■□□□□ 0.52
SREBF1-222ENST00000583732 RAB11FIP3O75154 756 aa18.28■□□□□ 0.52
SREBF1-222ENST00000583732 AKR1B1P15121 316 aa18.28■□□□□ 0.52
SREBF1-222ENST00000583732 CYP2C19P33261 490 aa18.28■□□□□ 0.52
SREBF1-222ENST00000583732 LRRC26Q2I0M4 334 aa18.28■□□□□ 0.52
SREBF1-222ENST00000583732 KIAA1755Q5JYT7 1200 aa18.28■□□□□ 0.52
SREBF1-222ENST00000583732 TMEM179Q6ZVK1 233 aa18.28■□□□□ 0.52
SREBF1-222ENST00000583732 MOV10L1Q9BXT6 1211 aaKnown RBP18.28■□□□□ 0.52
SREBF1-222ENST00000583732 SWAP70Q9UH65 585 aa18.28■□□□□ 0.52
SREBF1-222ENST00000583732 COL11A1P12107 1806 aaPredicted RBP18.28■□□□□ 0.52
SREBF1-222ENST00000583732 COL6A1P12109 1028 aa18.27■□□□□ 0.52
SREBF1-222ENST00000583732 PLS1Q14651 629 aa18.27■□□□□ 0.52
SREBF1-222ENST00000583732 COG2Q14746 738 aa18.27■□□□□ 0.52
SREBF1-222ENST00000583732 SPICE1Q8N0Z3 855 aa18.27■□□□□ 0.52
SREBF1-222ENST00000583732 ARHGEF10LQ9HCE6 1279 aa18.27■□□□□ 0.52
SREBF1-222ENST00000583732 SMARCA5O60264 1052 aaPredicted RBP18.26■□□□□ 0.51
SREBF1-222ENST00000583732 BMP8BP34820 402 aa18.26■□□□□ 0.51
SREBF1-222ENST00000583732 ICA1Q05084 483 aa18.26■□□□□ 0.51
SREBF1-222ENST00000583732 DPP9Q86TI2 863 aa18.26■□□□□ 0.51
SREBF1-222ENST00000583732 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.26■□□□□ 0.514e-7■■■□□ 15.4
SREBF1-222ENST00000583732 SPATC1LQ9H0A9 340 aa18.26■□□□□ 0.51
SREBF1-222ENST00000583732 DDX20Q9UHI6 824 aaKnown RBP18.26■□□□□ 0.51
SREBF1-222ENST00000583732 FLOT1O75955 427 aa18.25■□□□□ 0.51
SREBF1-222ENST00000583732 ATP5JP18859 108 aa18.25■□□□□ 0.51
SREBF1-222ENST00000583732 ERCC3P19447 782 aa18.25■□□□□ 0.51
SREBF1-222ENST00000583732 ADORA2AP29274 412 aa18.25■□□□□ 0.51
SREBF1-222ENST00000583732 AMOTL1Q8IY63 956 aa18.25■□□□□ 0.51
SREBF1-222ENST00000583732 TRPV1Q8NER1 839 aa18.25■□□□□ 0.51
SREBF1-222ENST00000583732 ATG4CQ96DT6 458 aa18.25■□□□□ 0.51
SREBF1-222ENST00000583732 HAUS7Q99871 368 aa18.25■□□□□ 0.51
SREBF1-222ENST00000583732 UBE2OQ9C0C9 1292 aaKnown RBP18.25■□□□□ 0.51
SREBF1-222ENST00000583732 SENP6Q9GZR1 1112 aaPredicted RBP18.25■□□□□ 0.51
SREBF1-222ENST00000583732 ATP8A2Q9NTI2 1148 aa18.25■□□□□ 0.51
SREBF1-222ENST00000583732 HOXC6P09630 235 aa18.24■□□□□ 0.51
SREBF1-222ENST00000583732 CDK8P49336 464 aa18.24■□□□□ 0.51
SREBF1-222ENST00000583732 ATN1P54259 1190 aaPredicted RBP18.24■□□□□ 0.51
SREBF1-222ENST00000583732 MDM2Q00987 491 aaPredicted RBP18.24■□□□□ 0.51
SREBF1-222ENST00000583732 C20orf194Q5TEA3 1177 aa18.24■□□□□ 0.51
SREBF1-222ENST00000583732 ANO1Q5XXA6 986 aa18.24■□□□□ 0.51
SREBF1-222ENST00000583732 NCAPG2Q86XI2 1143 aa18.24■□□□□ 0.51
SREBF1-222ENST00000583732 HOXC10Q9NYD6 342 aa18.24■□□□□ 0.51
SREBF1-222ENST00000583732 RCAN3Q9UKA8 241 aa18.24■□□□□ 0.51
SREBF1-222ENST00000583732 SLC4A4Q9Y6R1 1079 aa18.24■□□□□ 0.51
SREBF1-222ENST00000583732 USP17L12C9JPN9 530 aa18.23■□□□□ 0.51
SREBF1-222ENST00000583732 USP17L21D6R901 530 aa18.23■□□□□ 0.51
SREBF1-222ENST00000583732 DSG3P32926 999 aa18.23■□□□□ 0.51
SREBF1-222ENST00000583732 C12orf60Q5U649 245 aa18.23■□□□□ 0.51
SREBF1-222ENST00000583732 SIAH1Q8IUQ4 282 aa18.23■□□□□ 0.51
SREBF1-222ENST00000583732 TDHQ8IZJ6 230 aa18.23■□□□□ 0.51
SREBF1-222ENST00000583732 CHMP4BQ9H444 224 aaKnown RBP18.23■□□□□ 0.51
SREBF1-222ENST00000583732 SH2D4AQ9H788 454 aa18.23■□□□□ 0.51
SREBF1-222ENST00000583732 VCPKMTQ9H867 229 aa18.23■□□□□ 0.51
SREBF1-222ENST00000583732 ZNFX1Q9P2E3 1918 aaKnown RBP18.22■□□□□ 0.51
SREBF1-222ENST00000583732 RAD21O60216 631 aa18.22■□□□□ 0.51
SREBF1-222ENST00000583732 MYCNP04198 464 aaPredicted RBP18.22■□□□□ 0.51
SREBF1-222ENST00000583732 CYBAP13498 195 aa18.22■□□□□ 0.51
SREBF1-222ENST00000583732 STK11IPQ8N1F8 1099 aa18.22■□□□□ 0.51
SREBF1-222ENST00000583732 LPAR1Q92633 364 aa18.22■□□□□ 0.51
SREBF1-222ENST00000583732 DDRGK1Q96HY6 314 aa18.22■□□□□ 0.51
SREBF1-222ENST00000583732 LRRCC1Q9C099 1032 aa18.22■□□□□ 0.51
SREBF1-222ENST00000583732 TMX2Q9Y320 296 aa18.22■□□□□ 0.51
SREBF1-222ENST00000583732 PLXNA1Q9UIW2 1896 aa18.21■□□□□ 0.51
SREBF1-222ENST00000583732 MSCO60682 206 aa18.21■□□□□ 0.51
SREBF1-222ENST00000583732 COBLO75128 1261 aa18.21■□□□□ 0.51
SREBF1-222ENST00000583732 EEF2P13639 858 aaKnown RBP18.21■□□□□ 0.51
SREBF1-222ENST00000583732 UBE3CQ15386 1083 aa18.21■□□□□ 0.51
SREBF1-222ENST00000583732 GJC2Q5T442 439 aaPredicted RBP18.21■□□□□ 0.51
SREBF1-222ENST00000583732 C16orf86Q6ZW13 317 aa18.21■□□□□ 0.51
SREBF1-222ENST00000583732 Q7L0L9 218 aa18.21■□□□□ 0.51
SREBF1-222ENST00000583732 MB21D1Q8N884 522 aa18.21■□□□□ 0.51
SREBF1-222ENST00000583732 SHCBP1Q8NEM2 672 aa18.21■□□□□ 0.51
SREBF1-222ENST00000583732 PUS7LQ9H0K6 701 aaKnown RBP18.21■□□□□ 0.51
SREBF1-222ENST00000583732 WDR46O15213 610 aaKnown RBP18.2■□□□□ 0.5
SREBF1-222ENST00000583732 STRNO43815 780 aa18.2■□□□□ 0.5
SREBF1-222ENST00000583732 PRAMEF19Q5SWL8 479 aa18.2■□□□□ 0.5
SREBF1-222ENST00000583732 OLFML2BQ68BL8 750 aa18.2■□□□□ 0.5
SREBF1-222ENST00000583732 ZSCAN25Q6NSZ9 544 aa18.2■□□□□ 0.5
SREBF1-222ENST00000583732 CCDC17Q96LX7 622 aa18.2■□□□□ 0.5
SREBF1-222ENST00000583732 MROH8Q9H579 483 aa18.2■□□□□ 0.5
SREBF1-222ENST00000583732 FBXO28Q9NVF7 368 aa18.2■□□□□ 0.5
SREBF1-222ENST00000583732 LTBP2Q14767 1821 aa18.2■□□□□ 0.5
SREBF1-222ENST00000583732 LAMA3Q16787 3333 aa18.2■□□□□ 0.5
SREBF1-222ENST00000583732 GREB1LQ9C091 1923 aaPredicted RBP18.19■□□□□ 0.5
SREBF1-222ENST00000583732 DNM1LO00429 736 aa18.19■□□□□ 0.5
SREBF1-222ENST00000583732 RTP1P59025 263 aa18.19■□□□□ 0.5
SREBF1-222ENST00000583732 TMEM132BQ14DG7 1078 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms