RNA–Protein interactions for RNA: ENST00000581273.5

TVP23C-208, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 3

Gene TVP23C, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-208ENST00000581273 PPFIA4O75335 1185 aa8.54□□□□□ -1.04
TVP23C-208ENST00000581273 BBOX1O75936 387 aa8.54□□□□□ -1.04
TVP23C-208ENST00000581273 URI1O94763 535 aaPredicted RBP8.54□□□□□ -1.04
TVP23C-208ENST00000581273 TXLNAP40222 546 aa8.54□□□□□ -1.04
TVP23C-208ENST00000581273 GSCP56915 257 aaPredicted RBP8.54□□□□□ -1.04
TVP23C-208ENST00000581273 MAP9Q49MG5 647 aa8.54□□□□□ -1.04
TVP23C-208ENST00000581273 GORABQ5T7V8 394 aa8.54□□□□□ -1.04
TVP23C-208ENST00000581273 OTOP1Q7RTM1 612 aa8.54□□□□□ -1.04
TVP23C-208ENST00000581273 KRT26Q7Z3Y9 468 aa8.54□□□□□ -1.04
TVP23C-208ENST00000581273 RASAL3Q86YV0 1011 aa8.54□□□□□ -1.04
TVP23C-208ENST00000581273 C2orf69Q8N8R5 385 aa8.54□□□□□ -1.04
TVP23C-208ENST00000581273 ZC3H15Q8WU90 426 aaKnown RBP8.54□□□□□ -1.04
TVP23C-208ENST00000581273 STAG1Q8WVM7 1258 aa8.54□□□□□ -1.04
TVP23C-208ENST00000581273 JAKMIP1Q96N16 626 aaKnown RBP8.54□□□□□ -1.04
TVP23C-208ENST00000581273 MEIS3Q99687 375 aa8.54□□□□□ -1.04
TVP23C-208ENST00000581273 LLPHQ9BRT6 129 aaKnown RBP8.54□□□□□ -1.04
TVP23C-208ENST00000581273 RTFDC1Q9BY42 306 aaPredicted RBP8.54□□□□□ -1.04
TVP23C-208ENST00000581273 VPS33BQ9H267 617 aa8.54□□□□□ -1.04
TVP23C-208ENST00000581273 DBNDD1Q9H9R9 158 aa8.54□□□□□ -1.04
TVP23C-208ENST00000581273 PGAP2Q9UHJ9 254 aa8.54□□□□□ -1.04
TVP23C-208ENST00000581273 TRMT112Q9UI30 125 aaKnown RBP8.54□□□□□ -1.04
TVP23C-208ENST00000581273 TSPYL4Q9UJ04 414 aa8.54□□□□□ -1.04
TVP23C-208ENST00000581273 WTIPA6NIX2 430 aaPredicted RBP8.53□□□□□ -1.04
TVP23C-208ENST00000581273 TMCO5BA8MYB1 307 aa8.53□□□□□ -1.04
TVP23C-208ENST00000581273 EIF3CLB5ME19 914 aaKnown RBP8.53□□□□□ -1.04
TVP23C-208ENST00000581273 ADM5C9JUS6 153 aa8.53□□□□□ -1.04
TVP23C-208ENST00000581273 H3BQV1 296 aa8.53□□□□□ -1.04
TVP23C-208ENST00000581273 PSMD14O00487 310 aa8.53□□□□□ -1.04
TVP23C-208ENST00000581273 MAP2K7O14733 419 aa8.53□□□□□ -1.04
TVP23C-208ENST00000581273 IKBKBO14920 756 aa8.53□□□□□ -1.04
TVP23C-208ENST00000581273 MYCP01106 439 aaPredicted RBP8.53□□□□□ -1.04
TVP23C-208ENST00000581273 SATB1Q01826 763 aa8.53□□□□□ -1.04
TVP23C-208ENST00000581273 FAM160A1Q05DH4 1040 aa8.53□□□□□ -1.04
TVP23C-208ENST00000581273 PPP2R3AQ06190 1150 aa8.53□□□□□ -1.04
TVP23C-208ENST00000581273 MAP3K12Q12852 859 aa8.53□□□□□ -1.04
TVP23C-208ENST00000581273 GNL2Q13823 731 aaKnown RBP8.53□□□□□ -1.04
TVP23C-208ENST00000581273 DOK7Q18PE1 504 aa8.53□□□□□ -1.04
TVP23C-208ENST00000581273 SLC10A5Q5PT55 438 aa8.53□□□□□ -1.04
TVP23C-208ENST00000581273 E4F1Q66K89 784 aaPredicted RBP8.53□□□□□ -1.04
TVP23C-208ENST00000581273 SMYD5Q6GMV2 418 aa8.53□□□□□ -1.04
TVP23C-208ENST00000581273 NAA16Q6N069 864 aaPredicted RBP8.53□□□□□ -1.04
TVP23C-208ENST00000581273 COPS6Q7L5N1 327 aa8.53□□□□□ -1.04
TVP23C-208ENST00000581273 XAGE3Q8WTP9 111 aa8.53□□□□□ -1.04
TVP23C-208ENST00000581273 PTCD2Q8WV60 388 aaKnown RBP8.53□□□□□ -1.04
TVP23C-208ENST00000581273 DCPSQ96C86 337 aaKnown RBP8.53□□□□□ -1.04
TVP23C-208ENST00000581273 EIF3CQ99613 913 aaKnown RBP8.53□□□□□ -1.04
TVP23C-208ENST00000581273 A1CFQ9NQ94 594 aaKnown RBP8.53□□□□□ -1.04
TVP23C-208ENST00000581273 ST7Q9NRC1 585 aa8.53□□□□□ -1.04
TVP23C-208ENST00000581273 A0A1W2PQ27 194 aa8.52□□□□□ -1.05
TVP23C-208ENST00000581273 A0A1W2PQ64 194 aa8.52□□□□□ -1.05
TVP23C-208ENST00000581273 A0A1W2PQD8 194 aa8.52□□□□□ -1.05
TVP23C-208ENST00000581273 USP27XA6NNY8 438 aa8.52□□□□□ -1.05
TVP23C-208ENST00000581273 ELL2O00472 640 aaPredicted RBP8.52□□□□□ -1.05
TVP23C-208ENST00000581273 EGFRP00533 1210 aa8.52□□□□□ -1.05
TVP23C-208ENST00000581273 ERCC3P19447 782 aa8.52□□□□□ -1.05
TVP23C-208ENST00000581273 USP5P45974 858 aa8.52□□□□□ -1.05
TVP23C-208ENST00000581273 APOBRQ0VD83 1088 aa8.52□□□□□ -1.05
TVP23C-208ENST00000581273 GRAPQ13588 217 aa8.52□□□□□ -1.05
TVP23C-208ENST00000581273 WASHC4Q2M389 1173 aa8.52□□□□□ -1.05
TVP23C-208ENST00000581273 BLOC1S2Q6QNY1 142 aa8.52□□□□□ -1.05
TVP23C-208ENST00000581273 RSRC2Q7L4I2 434 aaKnown RBP8.52□□□□□ -1.05
TVP23C-208ENST00000581273 TADA2BQ86TJ2 420 aa8.52□□□□□ -1.05
TVP23C-208ENST00000581273 NLRP10Q86W26 655 aa8.52□□□□□ -1.05
TVP23C-208ENST00000581273 GRAPLQ8TC17 118 aaPredicted RBP8.52□□□□□ -1.05
TVP23C-208ENST00000581273 ARMC5Q96C12 935 aa8.52□□□□□ -1.05
TVP23C-208ENST00000581273 FUT8Q9BYC5 575 aa8.52□□□□□ -1.05
TVP23C-208ENST00000581273 CXorf56Q9H5V9 222 aa8.52□□□□□ -1.05
TVP23C-208ENST00000581273 VIPAS39Q9H9C1 493 aa8.52□□□□□ -1.05
TVP23C-208ENST00000581273 KCNQ5Q9NR82 932 aa8.52□□□□□ -1.05
TVP23C-208ENST00000581273 RCOR1Q9UKL0 485 aa8.52□□□□□ -1.05
TVP23C-208ENST00000581273 CDHR2Q9BYE9 1310 aa8.52□□□□□ -1.05
TVP23C-208ENST00000581273 LOC102724159A0A0B4J2E5 919 aa8.51□□□□□ -1.05
TVP23C-208ENST00000581273 MLLT3P42568 568 aaPredicted RBP8.51□□□□□ -1.05
TVP23C-208ENST00000581273 TDO2P48775 406 aa8.51□□□□□ -1.05
TVP23C-208ENST00000581273 MAP3K9P80192 1104 aa8.51□□□□□ -1.05
TVP23C-208ENST00000581273 PWP2Q15269 919 aaKnown RBP8.51□□□□□ -1.05
TVP23C-208ENST00000581273 LONRF2Q1L5Z9 754 aa8.51□□□□□ -1.05
TVP23C-208ENST00000581273 SLC4A8Q2Y0W8 1093 aa8.51□□□□□ -1.05
TVP23C-208ENST00000581273 HSP90AB3PQ58FF7 597 aa8.51□□□□□ -1.05
TVP23C-208ENST00000581273 TMC6Q7Z403 805 aa8.51□□□□□ -1.05
TVP23C-208ENST00000581273 EVI5LQ96CN4 794 aa8.51□□□□□ -1.05
TVP23C-208ENST00000581273 DRC1Q96MC2 740 aa8.51□□□□□ -1.05
TVP23C-208ENST00000581273 CARD6Q9BX69 1037 aa8.51□□□□□ -1.05
TVP23C-208ENST00000581273 BABAM1Q9NWV8 329 aa8.51□□□□□ -1.05
TVP23C-208ENST00000581273 PTPN22Q9Y2R2 807 aa8.51□□□□□ -1.05
TVP23C-208ENST00000581273 SCN9AQ15858 1988 aa8.51□□□□□ -1.05
TVP23C-208ENST00000581273 SH3TC1Q8TE82 1336 aa8.51□□□□□ -1.05
TVP23C-208ENST00000581273 ATXN2Q99700 1313 aaKnown RBP8.51□□□□□ -1.05
TVP23C-208ENST00000581273 A0A1W2PPC1 479 aa8.5□□□□□ -1.05
TVP23C-208ENST00000581273 TRIM66O15016 1216 aa8.5□□□□□ -1.05
TVP23C-208ENST00000581273 ECE2O60344 883 aa8.5□□□□□ -1.05
TVP23C-208ENST00000581273 NR1I2O75469 434 aa8.5□□□□□ -1.05
TVP23C-208ENST00000581273 HMGB1P09429 215 aaKnown RBP8.5□□□□□ -1.05
TVP23C-208ENST00000581273 RDXP35241 583 aaKnown RBP8.5□□□□□ -1.05
TVP23C-208ENST00000581273 GPSM2P81274 684 aa8.5□□□□□ -1.05
TVP23C-208ENST00000581273 TCIRG1Q13488 830 aa8.5□□□□□ -1.05
TVP23C-208ENST00000581273 TSGA10IPQ3SY00 556 aa8.5□□□□□ -1.05
TVP23C-208ENST00000581273 CCDC30Q5VVM6 783 aa8.5□□□□□ -1.05
TVP23C-208ENST00000581273 GPR153Q6NV75 609 aa8.5□□□□□ -1.05
TVP23C-208ENST00000581273 GBP6Q6ZN66 633 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms