RNA–Protein interactions for RNA: ENST00000581250.5

PPP4R1-219, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-219ENST00000581250 COA7Q96BR5 231 aa14.17□□□□□ -0.14
PPP4R1-219ENST00000581250 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.17□□□□□ -0.14
PPP4R1-219ENST00000581250 SH2D4AQ9H788 454 aa14.17□□□□□ -0.14
PPP4R1-219ENST00000581250 KANSL2Q9H9L4 492 aa14.17□□□□□ -0.14
PPP4R1-219ENST00000581250 DIAPH3Q9NSV4 1193 aa14.17□□□□□ -0.14
PPP4R1-219ENST00000581250 RBPJLQ9UBG7 517 aa14.17□□□□□ -0.14
PPP4R1-219ENST00000581250 MORF4L1Q9UBU8 362 aa14.17□□□□□ -0.14
PPP4R1-219ENST00000581250 A0A0G2JMZ2 1700 aa14.17□□□□□ -0.14
PPP4R1-219ENST00000581250 CCDC171Q6TFL3 1326 aa14.16□□□□□ -0.14
PPP4R1-219ENST00000581250 POTEFA5A3E0 1075 aa14.16□□□□□ -0.14
PPP4R1-219ENST00000581250 SPDYE16A6NNV3 312 aaPredicted RBP14.16□□□□□ -0.14
PPP4R1-219ENST00000581250 ELNP15502 786 aa14.16□□□□□ -0.14
PPP4R1-219ENST00000581250 SDSP20132 328 aa14.16□□□□□ -0.14
PPP4R1-219ENST00000581250 ERVK-9P63128 1117 aa14.16□□□□□ -0.14
PPP4R1-219ENST00000581250 ERVK-24P63145 666 aa14.16□□□□□ -0.14
PPP4R1-219ENST00000581250 FAM47AQ5JRC9 791 aa14.16□□□□□ -0.14
PPP4R1-219ENST00000581250 NBPF11Q86T75 865 aa14.16□□□□□ -0.14
PPP4R1-219ENST00000581250 GPRC5AQ8NFJ5 357 aa14.16□□□□□ -0.14
PPP4R1-219ENST00000581250 PORCNQ9H237 461 aa14.16□□□□□ -0.14
PPP4R1-219ENST00000581250 VCPKMTQ9H867 229 aa14.16□□□□□ -0.14
PPP4R1-219ENST00000581250 BIN2Q9UBW5 565 aaPredicted RBP14.16□□□□□ -0.14
PPP4R1-219ENST00000581250 TMX2Q9Y320 296 aa14.16□□□□□ -0.14
PPP4R1-219ENST00000581250 MKI67P46013 3256 aaKnown RBP14.16□□□□□ -0.14
PPP4R1-219ENST00000581250 COL11A1P12107 1806 aaPredicted RBP14.15□□□□□ -0.14
PPP4R1-219ENST00000581250 CNMDO75829 334 aa14.15□□□□□ -0.14
PPP4R1-219ENST00000581250 SLC3A2P08195 630 aaKnown RBP14.15□□□□□ -0.14
PPP4R1-219ENST00000581250 GSPT1P15170 499 aaKnown RBP14.15□□□□□ -0.14
PPP4R1-219ENST00000581250 GRK4P32298 578 aa14.15□□□□□ -0.14
PPP4R1-219ENST00000581250 MLLT1Q03111 559 aaPredicted RBP14.15□□□□□ -0.14
PPP4R1-219ENST00000581250 PDE4BQ07343 736 aa14.15□□□□□ -0.14
PPP4R1-219ENST00000581250 TTC22Q5TAA0 569 aa14.15□□□□□ -0.14
PPP4R1-219ENST00000581250 CWC27Q6UX04 472 aaKnown RBP14.15□□□□□ -0.14
PPP4R1-219ENST00000581250 CCAR1Q8IX12 1150 aaKnown RBP14.15□□□□□ -0.14
PPP4R1-219ENST00000581250 ZNF444Q8N0Y2 327 aaPredicted RBP14.15□□□□□ -0.14
PPP4R1-219ENST00000581250 GTF3C2Q8WUA4 911 aaPredicted RBP14.15□□□□□ -0.14
PPP4R1-219ENST00000581250 LPAR1Q92633 364 aa14.15□□□□□ -0.14
PPP4R1-219ENST00000581250 ZNF287Q9HBT7 754 aa14.15□□□□□ -0.14
PPP4R1-219ENST00000581250 CWC22Q9HCG8 908 aaKnown RBP14.15□□□□□ -0.14
PPP4R1-219ENST00000581250 INCENPQ9NQS7 918 aa14.15□□□□□ -0.14
PPP4R1-219ENST00000581250 LAMA4Q16363 1823 aa14.15□□□□□ -0.14
PPP4R1-219ENST00000581250 ADCY3O60266 1144 aa14.14□□□□□ -0.15
PPP4R1-219ENST00000581250 FLOT1O75955 427 aa14.14□□□□□ -0.15
PPP4R1-219ENST00000581250 TSPY3P0CV98 308 aa14.14□□□□□ -0.15
PPP4R1-219ENST00000581250 TSPY8P0CW00 308 aa14.14□□□□□ -0.15
PPP4R1-219ENST00000581250 HSPD1P10809 573 aaKnown RBP14.14□□□□□ -0.15
PPP4R1-219ENST00000581250 RGS19P49795 217 aa14.14□□□□□ -0.15
PPP4R1-219ENST00000581250 HAND2P61296 217 aa14.14□□□□□ -0.15
PPP4R1-219ENST00000581250 MTFR1Q15390 333 aa14.14□□□□□ -0.15
PPP4R1-219ENST00000581250 Q3C1V9 767 aa14.14□□□□□ -0.15
PPP4R1-219ENST00000581250 WDR78Q5VTH9 848 aa14.14□□□□□ -0.15
PPP4R1-219ENST00000581250 LRRC47Q8N1G4 583 aaKnown RBP14.14□□□□□ -0.15
PPP4R1-219ENST00000581250 CEP95Q96GE4 821 aa14.14□□□□□ -0.15
PPP4R1-219ENST00000581250 NUP88Q99567 741 aaPredicted RBP14.14□□□□□ -0.15
PPP4R1-219ENST00000581250 GOPCQ9HD26 462 aa14.14□□□□□ -0.15
PPP4R1-219ENST00000581250 BTBD7Q9P203 1132 aa14.14□□□□□ -0.15
PPP4R1-219ENST00000581250 RABGAP1Q9Y3P9 1069 aa14.14□□□□□ -0.15
PPP4R1-219ENST00000581250 TACC3Q9Y6A5 838 aa14.14□□□□□ -0.15
PPP4R1-219ENST00000581250 PLIN4Q96Q06 1357 aa14.13□□□□□ -0.15
PPP4R1-219ENST00000581250 IGKV6D-41A0A0C4DH26 115 aa14.13□□□□□ -0.15
PPP4R1-219ENST00000581250 WDR46O15213 610 aaKnown RBP14.13□□□□□ -0.15
PPP4R1-219ENST00000581250 FGAP02671 866 aa14.13□□□□□ -0.15
PPP4R1-219ENST00000581250 FAM83BQ5T0W9 1011 aa14.13□□□□□ -0.15
PPP4R1-219ENST00000581250 SLAIN1Q8ND83 568 aa14.13□□□□□ -0.15
PPP4R1-219ENST00000581250 ATG4CQ96DT6 458 aa14.13□□□□□ -0.15
PPP4R1-219ENST00000581250 TMEM106CQ9BVX2 250 aa14.13□□□□□ -0.15
PPP4R1-219ENST00000581250 TOMM22Q9NS69 142 aa14.13□□□□□ -0.15
PPP4R1-219ENST00000581250 FBXO28Q9NVF7 368 aa14.13□□□□□ -0.15
PPP4R1-219ENST00000581250 CLIP2Q9UDT6 1046 aa14.13□□□□□ -0.15
PPP4R1-219ENST00000581250 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.13□□□□□ -0.15
PPP4R1-219ENST00000581250 MAPK4P31152 587 aa14.12□□□□□ -0.15
PPP4R1-219ENST00000581250 MFAP1P55081 439 aaKnown RBP14.12□□□□□ -0.15
PPP4R1-219ENST00000581250 TFAP4Q01664 338 aa14.12□□□□□ -0.15
PPP4R1-219ENST00000581250 COG2Q14746 738 aa14.12□□□□□ -0.15
PPP4R1-219ENST00000581250 ALX1Q15699 326 aa14.12□□□□□ -0.15
PPP4R1-219ENST00000581250 RRP12Q5JTH9 1297 aaKnown RBP14.12□□□□□ -0.15
PPP4R1-219ENST00000581250 GPR142Q7Z601 462 aa14.12□□□□□ -0.15
PPP4R1-219ENST00000581250 TICAM2Q86XR7 235 aa14.12□□□□□ -0.15
PPP4R1-219ENST00000581250 CHMP4CQ96CF2 233 aa14.12□□□□□ -0.15
PPP4R1-219ENST00000581250 NYAP2Q9P242 653 aa14.12□□□□□ -0.15
PPP4R1-219ENST00000581250 ISY1Q9ULR0 285 aaKnown RBP14.12□□□□□ -0.15
PPP4R1-219ENST00000581250 TSPY2A6NKD2 308 aa14.11□□□□□ -0.15
PPP4R1-219ENST00000581250 HIP1O00291 1037 aa14.11□□□□□ -0.15
PPP4R1-219ENST00000581250 RANBP6O60518 1105 aaKnown RBP14.11□□□□□ -0.15
PPP4R1-219ENST00000581250 NMT2O60551 498 aa14.11□□□□□ -0.15
PPP4R1-219ENST00000581250 NDUFB10O96000 172 aa14.11□□□□□ -0.15
PPP4R1-219ENST00000581250 INHAP05111 366 aa14.11□□□□□ -0.15
PPP4R1-219ENST00000581250 CCL5P13501 91 aa14.11□□□□□ -0.15
PPP4R1-219ENST00000581250 EN2P19622 333 aaPredicted RBP14.11□□□□□ -0.15
PPP4R1-219ENST00000581250 CYP2B6P20813 491 aa14.11□□□□□ -0.15
PPP4R1-219ENST00000581250 CCNA1P78396 465 aa14.11□□□□□ -0.15
PPP4R1-219ENST00000581250 IRF5Q13568 498 aa14.11□□□□□ -0.15
PPP4R1-219ENST00000581250 PLS1Q14651 629 aa14.11□□□□□ -0.15
PPP4R1-219ENST00000581250 PDE4DIPQ5VU43 2346 aa14.11□□□□□ -0.15
PPP4R1-219ENST00000581250 LBX2Q6XYB7 198 aa14.11□□□□□ -0.15
PPP4R1-219ENST00000581250 PLEKHH3Q7Z736 793 aa14.11□□□□□ -0.15
PPP4R1-219ENST00000581250 SKAP1Q86WV1 359 aa14.11□□□□□ -0.15
PPP4R1-219ENST00000581250 TBC1D10CQ8IV04 446 aa14.11□□□□□ -0.15
PPP4R1-219ENST00000581250 NEDD1Q8NHV4 660 aa14.11□□□□□ -0.15
PPP4R1-219ENST00000581250 NBPF3Q9H094 633 aa14.11□□□□□ -0.15
PPP4R1-219ENST00000581250 IL25Q9H293 177 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms