RNA–Protein interactions for RNA: ENST00000580539.2

RN7SL716P-201, Transcript of RNA, 7SL, cytoplasmic 716, pseudogene, humanhuman

BASIC

Gene RN7SL716P, Length 268 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL716P-201ENST00000580539 TNNI3KQ59H18 835 aa11.81□□□□□ -0.52
RN7SL716P-201ENST00000580539 GJC2Q5T442 439 aaPredicted RBP11.81□□□□□ -0.52
RN7SL716P-201ENST00000580539 NPLOC4Q8TAT6 608 aa11.81□□□□□ -0.52
RN7SL716P-201ENST00000580539 LBHD1Q9BQE6 289 aaPredicted RBP11.81□□□□□ -0.52
RN7SL716P-201ENST00000580539 C1orf115Q9H7X2 142 aa11.81□□□□□ -0.52
RN7SL716P-201ENST00000580539 BTBD7Q9P203 1132 aa11.81□□□□□ -0.52
RN7SL716P-201ENST00000580539 PCDHGA4Q9Y5G9 962 aa11.81□□□□□ -0.52
RN7SL716P-201ENST00000580539 FPGT-TNNI3KV9GXZ4 949 aa11.81□□□□□ -0.52
RN7SL716P-201ENST00000580539 USP17L15C9J2P7 530 aa11.8□□□□□ -0.52
RN7SL716P-201ENST00000580539 USP17L13C9JLJ4 530 aa11.8□□□□□ -0.52
RN7SL716P-201ENST00000580539 USP17L11C9JVI0 530 aa11.8□□□□□ -0.52
RN7SL716P-201ENST00000580539 USP17L18D6R9N7 530 aa11.8□□□□□ -0.52
RN7SL716P-201ENST00000580539 USP17L22D6RA61 530 aa11.8□□□□□ -0.52
RN7SL716P-201ENST00000580539 USP17L17D6RBQ6 530 aa11.8□□□□□ -0.52
RN7SL716P-201ENST00000580539 USP17L19D6RCP7 530 aa11.8□□□□□ -0.52
RN7SL716P-201ENST00000580539 USP17L20D6RJB6 530 aa11.8□□□□□ -0.52
RN7SL716P-201ENST00000580539 PPP1R37O75864 691 aa11.8□□□□□ -0.52
RN7SL716P-201ENST00000580539 IDH1O75874 414 aaKnown RBP11.8□□□□□ -0.52
RN7SL716P-201ENST00000580539 HLA-DOAP06340 250 aa11.8□□□□□ -0.52
RN7SL716P-201ENST00000580539 TRIM27P14373 513 aa11.8□□□□□ -0.52
RN7SL716P-201ENST00000580539 PTPREP23469 700 aa11.8□□□□□ -0.52
RN7SL716P-201ENST00000580539 USP17L24Q0WX57 530 aa11.8□□□□□ -0.52
RN7SL716P-201ENST00000580539 PRAMEF19Q5SWL8 479 aa11.8□□□□□ -0.52
RN7SL716P-201ENST00000580539 MFSD14CQ5VZR4 134 aa11.8□□□□□ -0.52
RN7SL716P-201ENST00000580539 CATSPERGQ6ZRH7 1159 aa11.8□□□□□ -0.52
RN7SL716P-201ENST00000580539 METTL16Q86W50 562 aaKnown RBP11.8□□□□□ -0.52
RN7SL716P-201ENST00000580539 TRMT44Q8IYL2 757 aaKnown RBP11.8□□□□□ -0.52
RN7SL716P-201ENST00000580539 ARHGAP45Q92619 1136 aa11.8□□□□□ -0.52
RN7SL716P-201ENST00000580539 GUCD1Q96NT3 240 aa11.8□□□□□ -0.52
RN7SL716P-201ENST00000580539 TLR7Q9NYK1 1049 aaKnown RBP11.8□□□□□ -0.52
RN7SL716P-201ENST00000580539 ATP11BQ9Y2G3 1177 aa11.8□□□□□ -0.52
RN7SL716P-201ENST00000580539 PHIPQ8WWQ0 1821 aa11.8□□□□□ -0.52
RN7SL716P-201ENST00000580539 DOCK2Q92608 1830 aa11.8□□□□□ -0.52
RN7SL716P-201ENST00000580539 DOCK1Q14185 1865 aa11.79□□□□□ -0.52
RN7SL716P-201ENST00000580539 CT47B1P0C2W7 299 aaPredicted RBP11.79□□□□□ -0.52
RN7SL716P-201ENST00000580539 CERKLQ49MI3 558 aaPredicted RBP11.79□□□□□ -0.52
RN7SL716P-201ENST00000580539 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.79□□□□□ -0.52
RN7SL716P-201ENST00000580539 TMEM57Q8N5G2 664 aa11.79□□□□□ -0.52
RN7SL716P-201ENST00000580539 MAGEB6Q8N7X4 407 aa11.79□□□□□ -0.52
RN7SL716P-201ENST00000580539 TRPV1Q8NER1 839 aa11.79□□□□□ -0.52
RN7SL716P-201ENST00000580539 APBA2Q99767 749 aa11.79□□□□□ -0.52
RN7SL716P-201ENST00000580539 ANTXR1Q9H6X2 564 aa11.79□□□□□ -0.52
RN7SL716P-201ENST00000580539 PRDM5Q9NQX1 630 aaPredicted RBP11.79□□□□□ -0.52
RN7SL716P-201ENST00000580539 DDX20Q9UHI6 824 aaKnown RBP11.79□□□□□ -0.52
RN7SL716P-201ENST00000580539 RABGAP1Q9Y3P9 1069 aa11.79□□□□□ -0.52
RN7SL716P-201ENST00000580539 IPO8O15397 1037 aaKnown RBP11.78□□□□□ -0.52
RN7SL716P-201ENST00000580539 PLCD1P51178 756 aa11.78□□□□□ -0.52
RN7SL716P-201ENST00000580539 ATP8B2P98198 1209 aa11.78□□□□□ -0.52
RN7SL716P-201ENST00000580539 SHHQ15465 462 aa11.78□□□□□ -0.52
RN7SL716P-201ENST00000580539 ABCB5Q2M3G0 1257 aa11.78□□□□□ -0.52
RN7SL716P-201ENST00000580539 TATDN1Q6P1N9 297 aa11.78□□□□□ -0.52
RN7SL716P-201ENST00000580539 ATF7IPQ6VMQ6 1270 aa11.78□□□□□ -0.52
RN7SL716P-201ENST00000580539 DPP9Q86TI2 863 aa11.78□□□□□ -0.52
RN7SL716P-201ENST00000580539 TMC2Q8TDI7 906 aa11.78□□□□□ -0.52
RN7SL716P-201ENST00000580539 FERMT2Q96AC1 680 aa11.78□□□□□ -0.52
RN7SL716P-201ENST00000580539 RPAP3Q9H6T3 665 aaPredicted RBP11.78□□□□□ -0.52
RN7SL716P-201ENST00000580539 PRKAG2Q9UGJ0 569 aa11.78□□□□□ -0.52
RN7SL716P-201ENST00000580539 IVNS1ABPQ9Y6Y0 642 aa11.78□□□□□ -0.52
RN7SL716P-201ENST00000580539 ALPK3Q96L96 1907 aa11.78□□□□□ -0.52
RN7SL716P-201ENST00000580539 SLC15A5A6NIM6 579 aa11.77□□□□□ -0.53
RN7SL716P-201ENST00000580539 MPHOSPH10O00566 681 aaKnown RBP11.77□□□□□ -0.53
RN7SL716P-201ENST00000580539 GLRX3O76003 335 aaKnown RBP11.77□□□□□ -0.53
RN7SL716P-201ENST00000580539 POLR3DP05423 398 aaPredicted RBP11.77□□□□□ -0.53
RN7SL716P-201ENST00000580539 VCAM1P19320 739 aa11.77□□□□□ -0.53
RN7SL716P-201ENST00000580539 RTP1P59025 263 aa11.77□□□□□ -0.53
RN7SL716P-201ENST00000580539 CCNA1P78396 465 aa11.77□□□□□ -0.53
RN7SL716P-201ENST00000580539 C9orf50Q5SZB4 431 aa11.77□□□□□ -0.53
RN7SL716P-201ENST00000580539 LPAR1Q92633 364 aa11.77□□□□□ -0.53
RN7SL716P-201ENST00000580539 BADQ92934 168 aa11.77□□□□□ -0.53
RN7SL716P-201ENST00000580539 EAF2Q96CJ1 260 aaPredicted RBP11.77□□□□□ -0.53
RN7SL716P-201ENST00000580539 CABP5Q9NP86 173 aa11.77□□□□□ -0.53
RN7SL716P-201ENST00000580539 SERPINB13Q9UIV8 391 aa11.77□□□□□ -0.53
RN7SL716P-201ENST00000580539 DBNLQ9UJU6 430 aaKnown RBP11.77□□□□□ -0.53
RN7SL716P-201ENST00000580539 PTPRFP10586 1907 aa11.76□□□□□ -0.53
RN7SL716P-201ENST00000580539 A0A1W2PRG0 241 aa11.76□□□□□ -0.53
RN7SL716P-201ENST00000580539 GUCY1A2P33402 732 aa11.76□□□□□ -0.53
RN7SL716P-201ENST00000580539 PLS1Q14651 629 aa11.76□□□□□ -0.53
RN7SL716P-201ENST00000580539 SEPT2Q15019 361 aa11.76□□□□□ -0.53
RN7SL716P-201ENST00000580539 SLC39A5Q6ZMH5 540 aa11.76□□□□□ -0.53
RN7SL716P-201ENST00000580539 SH3RF1Q7Z6J0 888 aa11.76□□□□□ -0.53
RN7SL716P-201ENST00000580539 CDX2Q99626 313 aaPredicted RBP11.76□□□□□ -0.53
RN7SL716P-201ENST00000580539 SEMA6BQ9H3T3 888 aa11.76□□□□□ -0.53
RN7SL716P-201ENST00000580539 GINM1Q9NU53 330 aa11.76□□□□□ -0.53
RN7SL716P-201ENST00000580539 DDX60LQ5H9U9 1706 aaKnown RBP11.76□□□□□ -0.53
RN7SL716P-201ENST00000580539 COL2A1P02458 1487 aaPredicted RBP11.76□□□□□ -0.53
RN7SL716P-201ENST00000580539 SPDYE16A6NNV3 312 aaPredicted RBP11.75□□□□□ -0.53
RN7SL716P-201ENST00000580539 COBLO75128 1261 aa11.75□□□□□ -0.53
RN7SL716P-201ENST00000580539 ADORA2AP29274 412 aa11.75□□□□□ -0.53
RN7SL716P-201ENST00000580539 SHMT1P34896 483 aa11.75□□□□□ -0.53
RN7SL716P-201ENST00000580539 ADCYAP1R1P41586 468 aa11.75□□□□□ -0.53
RN7SL716P-201ENST00000580539 USP14P54578 494 aa11.75□□□□□ -0.53
RN7SL716P-201ENST00000580539 KIAA1755Q5JYT7 1200 aa11.75□□□□□ -0.53
RN7SL716P-201ENST00000580539 ZNF697Q5TEC3 545 aa11.75□□□□□ -0.53
RN7SL716P-201ENST00000580539 TTC6Q86TZ1 520 aa11.75□□□□□ -0.53
RN7SL716P-201ENST00000580539 GTF3C2Q8WUA4 911 aaPredicted RBP11.75□□□□□ -0.53
RN7SL716P-201ENST00000580539 C12orf42Q96LP6 360 aa11.75□□□□□ -0.53
RN7SL716P-201ENST00000580539 MOV10L1Q9BXT6 1211 aaKnown RBP11.75□□□□□ -0.53
RN7SL716P-201ENST00000580539 KIAA1683Q9H0B3 1180 aa11.75□□□□□ -0.53
RN7SL716P-201ENST00000580539 GPR108Q9NPR9 543 aa11.75□□□□□ -0.53
RN7SL716P-201ENST00000580539 PLXNB2O15031 1838 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms