RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 CNNM4Q6P4Q7 775 aa13.43□□□□□ -0.26
ERBB2-206ENST00000578373 MRRFQ96E11 262 aaKnown RBP13.43□□□□□ -0.26
ERBB2-206ENST00000578373 KCNF1Q9H3M0 494 aa13.43□□□□□ -0.26
ERBB2-206ENST00000578373 MAN1B1Q9UKM7 699 aa13.43□□□□□ -0.26
ERBB2-206ENST00000578373 FRMPD2Q68DX3 1309 aaPredicted RBP13.43□□□□□ -0.26
ERBB2-206ENST00000578373 PSDA5PKW4 1024 aaPredicted RBP13.43□□□□□ -0.26
ERBB2-206ENST00000578373 ADD2P35612 726 aa13.43□□□□□ -0.26
ERBB2-206ENST00000578373 MCAMP43121 646 aa13.43□□□□□ -0.26
ERBB2-206ENST00000578373 PLCB3Q01970 1234 aa13.43□□□□□ -0.26
ERBB2-206ENST00000578373 SCARF1Q14162 830 aa13.43□□□□□ -0.26
ERBB2-206ENST00000578373 GIGYF2Q6Y7W6 1299 aaKnown RBP13.43□□□□□ -0.26
ERBB2-206ENST00000578373 BLIDQ8IZY5 108 aa13.43□□□□□ -0.26
ERBB2-206ENST00000578373 FOXN1O15353 648 aa13.42□□□□□ -0.26
ERBB2-206ENST00000578373 ECM2O94769 699 aaPredicted RBP13.42□□□□□ -0.26
ERBB2-206ENST00000578373 UBE3CQ15386 1083 aa13.42□□□□□ -0.26
ERBB2-206ENST00000578373 ADAT2Q7Z6V5 191 aaKnown RBP13.42□□□□□ -0.26
ERBB2-206ENST00000578373 CCDC65Q8IXS2 484 aa13.42□□□□□ -0.26
ERBB2-206ENST00000578373 SLAIN2Q9P270 581 aa13.42□□□□□ -0.26
ERBB2-206ENST00000578373 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.42□□□□□ -0.26
ERBB2-206ENST00000578373 IQGAP3Q86VI3 1631 aa13.42□□□□□ -0.26
ERBB2-206ENST00000578373 EEF2P13639 858 aaKnown RBP13.42□□□□□ -0.26
ERBB2-206ENST00000578373 MRPL12P52815 198 aaKnown RBP13.42□□□□□ -0.26
ERBB2-206ENST00000578373 NCAPH2Q6IBW4 605 aa13.42□□□□□ -0.26
ERBB2-206ENST00000578373 HOOK3Q86VS8 718 aa13.42□□□□□ -0.26
ERBB2-206ENST00000578373 CCDC114Q96M63 670 aa13.42□□□□□ -0.26
ERBB2-206ENST00000578373 ANKRD2Q9GZV1 360 aa13.42□□□□□ -0.26
ERBB2-206ENST00000578373 DDX41Q9UJV9 622 aaKnown RBP13.42□□□□□ -0.26
ERBB2-206ENST00000578373 SOS2Q07890 1332 aaPredicted RBP13.42□□□□□ -0.26
ERBB2-206ENST00000578373 STX10O60499 249 aa13.42□□□□□ -0.26
ERBB2-206ENST00000578373 SCG2P13521 617 aa13.42□□□□□ -0.26
ERBB2-206ENST00000578373 CYP27A1Q02318 531 aa13.42□□□□□ -0.26
ERBB2-206ENST00000578373 HLFQ16534 295 aa13.42□□□□□ -0.26
ERBB2-206ENST00000578373 STXBP4Q6ZWJ1 553 aa13.42□□□□□ -0.26
ERBB2-206ENST00000578373 REXO1Q8N1G1 1221 aaKnown RBP13.42□□□□□ -0.26
ERBB2-206ENST00000578373 CNBD1Q8NA66 436 aa13.42□□□□□ -0.26
ERBB2-206ENST00000578373 NYXQ9GZU5 481 aa13.42□□□□□ -0.26
ERBB2-206ENST00000578373 ZCCHC11Q5TAX3 1644 aaKnown RBP13.42□□□□□ -0.26
ERBB2-206ENST00000578373 DDX39AO00148 427 aaKnown RBP13.42□□□□□ -0.26
ERBB2-206ENST00000578373 CXCR5P32302 372 aa13.42□□□□□ -0.26
ERBB2-206ENST00000578373 CALCRLQ16602 461 aa13.42□□□□□ -0.26
ERBB2-206ENST00000578373 LRRC47Q8N1G4 583 aaKnown RBP13.42□□□□□ -0.26
ERBB2-206ENST00000578373 DMTNQ08495 405 aa13.41□□□□□ -0.26
ERBB2-206ENST00000578373 KLHL30Q0D2K2 578 aa13.41□□□□□ -0.26
ERBB2-206ENST00000578373 CCDC155Q8N6L0 562 aa13.41□□□□□ -0.26
ERBB2-206ENST00000578373 LRRIQ1Q96JM4 1722 aa13.41□□□□□ -0.26
ERBB2-206ENST00000578373 TCHPQ9BT92 498 aa13.41□□□□□ -0.26
ERBB2-206ENST00000578373 SERPINA10Q9UK55 444 aa13.41□□□□□ -0.26
ERBB2-206ENST00000578373 PCDHB13Q9Y5F0 798 aa13.41□□□□□ -0.26
ERBB2-206ENST00000578373 MLH3Q9UHC1 1453 aa13.41□□□□□ -0.26
ERBB2-206ENST00000578373 A0A1W2PRG0 241 aa13.41□□□□□ -0.26
ERBB2-206ENST00000578373 B4DLN1 442 aa13.41□□□□□ -0.26
ERBB2-206ENST00000578373 KLRF2D3W0D1 207 aa13.41□□□□□ -0.26
ERBB2-206ENST00000578373 TNNC1P63316 161 aa13.41□□□□□ -0.26
ERBB2-206ENST00000578373 LLGL1Q15334 1064 aa13.41□□□□□ -0.26
ERBB2-206ENST00000578373 TBC1D10CQ8IV04 446 aa13.41□□□□□ -0.26
ERBB2-206ENST00000578373 KCNK9Q9NPC2 374 aa13.41□□□□□ -0.26
ERBB2-206ENST00000578373 EFCAB6Q5THR3 1501 aa13.41□□□□□ -0.26
ERBB2-206ENST00000578373 CETN3O15182 167 aa13.41□□□□□ -0.26
ERBB2-206ENST00000578373 RASGRF1Q13972 1273 aa13.41□□□□□ -0.26
ERBB2-206ENST00000578373 TRIM14Q14142 442 aa13.41□□□□□ -0.26
ERBB2-206ENST00000578373 KCTD16Q68DU8 428 aa13.41□□□□□ -0.26
ERBB2-206ENST00000578373 CCDC121Q6ZUS5 278 aa13.41□□□□□ -0.26
ERBB2-206ENST00000578373 DPH6Q7L8W6 267 aa13.41□□□□□ -0.26
ERBB2-206ENST00000578373 FAM212AQ96EL1 285 aa13.41□□□□□ -0.26
ERBB2-206ENST00000578373 MAP3K15Q6ZN16 1313 aa13.4□□□□□ -0.26
ERBB2-206ENST00000578373 SH2B2O14492 632 aaPredicted RBP13.4□□□□□ -0.26
ERBB2-206ENST00000578373 RPN1P04843 607 aaKnown RBP13.4□□□□□ -0.26
ERBB2-206ENST00000578373 COPB1P53618 953 aaKnown RBP13.4□□□□□ -0.26
ERBB2-206ENST00000578373 LRRC41Q15345 812 aa13.4□□□□□ -0.26
ERBB2-206ENST00000578373 LONRF2Q1L5Z9 754 aa13.4□□□□□ -0.26
ERBB2-206ENST00000578373 SLC9C1Q4G0N8 1177 aa13.4□□□□□ -0.26
ERBB2-206ENST00000578373 NOX5Q96PH1 765 aa13.4□□□□□ -0.26
ERBB2-206ENST00000578373 CPVLQ9H3G5 476 aa13.4□□□□□ -0.26
ERBB2-206ENST00000578373 RPAP1Q9BWH6 1393 aaPredicted RBP13.4□□□□□ -0.26
ERBB2-206ENST00000578373 CCDC50Q8IVM0 306 aa13.4□□□□□ -0.26
ERBB2-206ENST00000578373 PARD6BQ9BYG5 372 aa13.4□□□□□ -0.26
ERBB2-206ENST00000578373 CCNL1Q9UK58 526 aaPredicted RBP13.4□□□□□ -0.26
ERBB2-206ENST00000578373 MADDQ8WXG6 1647 aa13.4□□□□□ -0.26
ERBB2-206ENST00000578373 CYB5R4Q7L1T6 521 aa13.4□□□□□ -0.26
ERBB2-206ENST00000578373 UHMK1Q8TAS1 419 aaKnown RBP13.4□□□□□ -0.26
ERBB2-206ENST00000578373 EYA3Q99504 573 aa13.4□□□□□ -0.26
ERBB2-206ENST00000578373 AK9Q5TCS8 1911 aa13.4□□□□□ -0.26
ERBB2-206ENST00000578373 NEO1Q92859 1461 aa13.4□□□□□ -0.26
ERBB2-206ENST00000578373 TUBBP07437 444 aa13.4□□□□□ -0.27
ERBB2-206ENST00000578373 ABCB4P21439 1286 aa13.4□□□□□ -0.27
ERBB2-206ENST00000578373 CACNB1Q02641 598 aaPredicted RBP13.4□□□□□ -0.27
ERBB2-206ENST00000578373 NLRP10Q86W26 655 aa13.4□□□□□ -0.27
ERBB2-206ENST00000578373 ABCC3O15438 1527 aa13.39□□□□□ -0.27
ERBB2-206ENST00000578373 MED23Q9ULK4 1368 aa13.39□□□□□ -0.27
ERBB2-206ENST00000578373 HARSP12081 509 aaKnown RBP13.39□□□□□ -0.27
ERBB2-206ENST00000578373 ZRSR2Q15696 482 aaKnown RBP13.39□□□□□ -0.27
ERBB2-206ENST00000578373 OXER1Q8TDS5 423 aa13.39□□□□□ -0.27
ERBB2-206ENST00000578373 IRX2Q9BZI1 471 aaPredicted RBP13.39□□□□□ -0.27
ERBB2-206ENST00000578373 PLCG2P16885 1265 aa13.39□□□□□ -0.27
ERBB2-206ENST00000578373 SLC1A4P43007 532 aa13.39□□□□□ -0.27
ERBB2-206ENST00000578373 ARHGAP44Q17R89 818 aa13.39□□□□□ -0.27
ERBB2-206ENST00000578373 NBPF14Q5TI25 921 aa13.39□□□□□ -0.27
ERBB2-206ENST00000578373 FMR1NBQ8N0W7 255 aaPredicted RBP13.39□□□□□ -0.27
ERBB2-206ENST00000578373 ST7Q9NRC1 585 aa13.39□□□□□ -0.27
ERBB2-206ENST00000578373 CDC23Q9UJX2 597 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms