RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 MPHOSPH10O00566 681 aaKnown RBP14.13□□□□□ -0.15
CTDNEP1-212ENST00000576613 SEPT2Q15019 361 aa14.13□□□□□ -0.15
CTDNEP1-212ENST00000576613 TTF1Q15361 905 aaPredicted RBP14.13□□□□□ -0.15
CTDNEP1-212ENST00000576613 ERC1Q8IUD2 1116 aa14.13□□□□□ -0.15
CTDNEP1-212ENST00000576613 MB21D1Q8N884 522 aa14.13□□□□□ -0.15
CTDNEP1-212ENST00000576613 SHCBP1Q8NEM2 672 aa14.13□□□□□ -0.15
CTDNEP1-212ENST00000576613 TRPV1Q8NER1 839 aa14.13□□□□□ -0.15
CTDNEP1-212ENST00000576613 RIOK1Q9BRS2 568 aaKnown RBP14.13□□□□□ -0.15
CTDNEP1-212ENST00000576613 MOV10L1Q9BXT6 1211 aaKnown RBP14.13□□□□□ -0.15
CTDNEP1-212ENST00000576613 CRNKL1Q9BZJ0 848 aaKnown RBP14.13□□□□□ -0.15
CTDNEP1-212ENST00000576613 SPATC1LQ9H0A9 340 aa14.13□□□□□ -0.15
CTDNEP1-212ENST00000576613 ANTXR1Q9H6X2 564 aa14.13□□□□□ -0.15
CTDNEP1-212ENST00000576613 PRDM5Q9NQX1 630 aaPredicted RBP14.13□□□□□ -0.15
CTDNEP1-212ENST00000576613 MYH8P13535 1937 aa14.12□□□□□ -0.15
CTDNEP1-212ENST00000576613 CCER2I3L3R5 266 aa14.12□□□□□ -0.15
CTDNEP1-212ENST00000576613 SEPT4O43236 478 aa14.12□□□□□ -0.15
CTDNEP1-212ENST00000576613 IGHA2P01877 340 aa14.12□□□□□ -0.15
CTDNEP1-212ENST00000576613 MYCNP04198 464 aaPredicted RBP14.12□□□□□ -0.15
CTDNEP1-212ENST00000576613 GUCY1A2P33402 732 aa14.12□□□□□ -0.15
CTDNEP1-212ENST00000576613 SLC39A5Q6ZMH5 540 aa14.12□□□□□ -0.15
CTDNEP1-212ENST00000576613 ITPRIPQ8IWB1 547 aa14.12□□□□□ -0.15
CTDNEP1-212ENST00000576613 MROH8Q9H579 483 aa14.12□□□□□ -0.15
CTDNEP1-212ENST00000576613 MCM9Q9NXL9 1143 aa14.12□□□□□ -0.15
CTDNEP1-212ENST00000576613 ERCC3P19447 782 aa14.11□□□□□ -0.15
CTDNEP1-212ENST00000576613 GABPAQ06546 454 aa14.11□□□□□ -0.15
CTDNEP1-212ENST00000576613 TMEM179Q6ZVK1 233 aa14.11□□□□□ -0.15
CTDNEP1-212ENST00000576613 AACSQ86V21 672 aa14.11□□□□□ -0.15
CTDNEP1-212ENST00000576613 ABRAQ8N0Z2 381 aa14.11□□□□□ -0.15
CTDNEP1-212ENST00000576613 SH2D4AQ9H788 454 aa14.11□□□□□ -0.15
CTDNEP1-212ENST00000576613 EYSQ5T1H1 3165 aa14.11□□□□□ -0.15
CTDNEP1-212ENST00000576613 A0A1W2PRG0 241 aa14.1□□□□□ -0.15
CTDNEP1-212ENST00000576613 PLS1Q14651 629 aa14.1□□□□□ -0.15
CTDNEP1-212ENST00000576613 SNX17Q15036 470 aa14.1□□□□□ -0.15
CTDNEP1-212ENST00000576613 SHHQ15465 462 aa14.1□□□□□ -0.15
CTDNEP1-212ENST00000576613 TRIM60Q495X7 471 aa14.1□□□□□ -0.15
CTDNEP1-212ENST00000576613 SLC9C2Q5TAH2 1124 aa14.1□□□□□ -0.15
CTDNEP1-212ENST00000576613 ANO1Q5XXA6 986 aa14.1□□□□□ -0.15
CTDNEP1-212ENST00000576613 NCAPG2Q86XI2 1143 aa14.1□□□□□ -0.15
CTDNEP1-212ENST00000576613 ARHGEF10LQ9HCE6 1279 aa14.1□□□□□ -0.15
CTDNEP1-212ENST00000576613 SWAP70Q9UH65 585 aa14.1□□□□□ -0.15
CTDNEP1-212ENST00000576613 COBLO75128 1261 aa14.09□□□□□ -0.15
CTDNEP1-212ENST00000576613 FLOT1O75955 427 aa14.09□□□□□ -0.15
CTDNEP1-212ENST00000576613 FCER1AP12319 257 aa14.09□□□□□ -0.15
CTDNEP1-212ENST00000576613 PDE6AP16499 860 aa14.09□□□□□ -0.15
CTDNEP1-212ENST00000576613 ADCYAP1R1P41586 468 aa14.09□□□□□ -0.15
CTDNEP1-212ENST00000576613 SMAD3P84022 425 aaKnown RBP14.09□□□□□ -0.15
CTDNEP1-212ENST00000576613 HSP90AB4PQ58FF6 505 aa14.09□□□□□ -0.15
CTDNEP1-212ENST00000576613 C1orf53Q5VUE5 145 aa14.09□□□□□ -0.15
CTDNEP1-212ENST00000576613 BADQ92934 168 aa14.09□□□□□ -0.15
CTDNEP1-212ENST00000576613 MAML3Q96JK9 1138 aa14.09□□□□□ -0.15
CTDNEP1-212ENST00000576613 CDX2Q99626 313 aaPredicted RBP14.09□□□□□ -0.15
CTDNEP1-212ENST00000576613 PDLIM7Q9NR12 457 aa14.09□□□□□ -0.15
CTDNEP1-212ENST00000576613 EXOC6BQ9Y2D4 811 aa14.09□□□□□ -0.15
CTDNEP1-212ENST00000576613 VCANP13611 3396 aa14.08□□□□□ -0.15
CTDNEP1-212ENST00000576613 DSG3P32926 999 aa14.08□□□□□ -0.16
CTDNEP1-212ENST00000576613 LRRC41Q15345 812 aa14.08□□□□□ -0.16
CTDNEP1-212ENST00000576613 C9orf50Q5SZB4 431 aa14.08□□□□□ -0.16
CTDNEP1-212ENST00000576613 CEP85Q6P2H3 762 aa14.08□□□□□ -0.16
CTDNEP1-212ENST00000576613 MAFAQ8NHW3 353 aaPredicted RBP14.08□□□□□ -0.16
CTDNEP1-212ENST00000576613 SDR42E1Q8WUS8 393 aa14.08□□□□□ -0.16
CTDNEP1-212ENST00000576613 SEMA6BQ9H3T3 888 aa14.08□□□□□ -0.16
CTDNEP1-212ENST00000576613 DCP1AQ9NPI6 582 aaPredicted RBP14.08□□□□□ -0.16
CTDNEP1-212ENST00000576613 NRBP1Q9UHY1 535 aa14.08□□□□□ -0.16
CTDNEP1-212ENST00000576613 ZNF532Q9HCE3 1301 aa14.08□□□□□ -0.16
CTDNEP1-212ENST00000576613 PARP14Q460N5 1801 aa14.08□□□□□ -0.16
CTDNEP1-212ENST00000576613 WDR46O15213 610 aaKnown RBP14.07□□□□□ -0.16
CTDNEP1-212ENST00000576613 SLC25A27O95847 323 aa14.07□□□□□ -0.16
CTDNEP1-212ENST00000576613 RARBP10826 455 aa14.07□□□□□ -0.16
CTDNEP1-212ENST00000576613 ICA1Q05084 483 aa14.07□□□□□ -0.16
CTDNEP1-212ENST00000576613 FAM47AQ5JRC9 791 aa14.07□□□□□ -0.16
CTDNEP1-212ENST00000576613 PRAMEF19Q5SWL8 479 aa14.07□□□□□ -0.16
CTDNEP1-212ENST00000576613 RNF180Q86T96 592 aa14.07□□□□□ -0.16
CTDNEP1-212ENST00000576613 AMOTL1Q8IY63 956 aa14.07□□□□□ -0.16
CTDNEP1-212ENST00000576613 SPICE1Q8N0Z3 855 aa14.07□□□□□ -0.16
CTDNEP1-212ENST00000576613 FERMT2Q96AC1 680 aa14.07□□□□□ -0.16
CTDNEP1-212ENST00000576613 ATG4CQ96DT6 458 aa14.07□□□□□ -0.16
CTDNEP1-212ENST00000576613 VCPKMTQ9H867 229 aa14.07□□□□□ -0.16
CTDNEP1-212ENST00000576613 XPNPEP3Q9NQH7 507 aa14.07□□□□□ -0.16
CTDNEP1-212ENST00000576613 TMX2Q9Y320 296 aa14.07□□□□□ -0.16
CTDNEP1-212ENST00000576613 TACC3Q9Y6A5 838 aa14.07□□□□□ -0.16
CTDNEP1-212ENST00000576613 CDH23Q9H251 3354 aa14.06□□□□□ -0.16
CTDNEP1-212ENST00000576613 COL11A1P12107 1806 aaPredicted RBP14.06□□□□□ -0.16
CTDNEP1-212ENST00000576613 GOLIM4O00461 696 aa14.06□□□□□ -0.16
CTDNEP1-212ENST00000576613 EVX2Q03828 476 aa14.06□□□□□ -0.16
CTDNEP1-212ENST00000576613 TLE2Q04725 743 aa14.06□□□□□ -0.16
CTDNEP1-212ENST00000576613 KIAA1755Q5JYT7 1200 aa14.06□□□□□ -0.16
CTDNEP1-212ENST00000576613 SAMD1Q6SPF0 538 aaPredicted RBP14.06□□□□□ -0.16
CTDNEP1-212ENST00000576613 CLASRPQ8N2M8 674 aaKnown RBP14.06□□□□□ -0.16
CTDNEP1-212ENST00000576613 LCORLQ8N3X6 602 aa14.06□□□□□ -0.16
CTDNEP1-212ENST00000576613 SLC44A5Q8NCS7 719 aa14.06□□□□□ -0.16
CTDNEP1-212ENST00000576613 CCDC17Q96LX7 622 aa14.06□□□□□ -0.16
CTDNEP1-212ENST00000576613 MMP19Q99542 508 aa14.06□□□□□ -0.16
CTDNEP1-212ENST00000576613 DNAJC2Q99543 621 aaKnown RBP14.06□□□□□ -0.16
CTDNEP1-212ENST00000576613 IL1RAPL2Q9NP60 686 aa14.06□□□□□ -0.16
CTDNEP1-212ENST00000576613 PHF24Q9UPV7 400 aa14.06□□□□□ -0.16
CTDNEP1-212ENST00000576613 PLXNA1Q9UIW2 1896 aa14.06□□□□□ -0.16
CTDNEP1-212ENST00000576613 ZNFX1Q9P2E3 1918 aaKnown RBP14.05□□□□□ -0.16
CTDNEP1-212ENST00000576613 TMEM265A0A087WTH1 108 aa14.05□□□□□ -0.16
CTDNEP1-212ENST00000576613 TCRBV5S4A2TA0A5A2 114 aa14.05□□□□□ -0.16
CTDNEP1-212ENST00000576613 TRIM43BA6NCK2 446 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms