RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 CEP83Q9Y592 693 aa14.59□□□□□ -0.07
PCDHGB3-201ENST00000576222 REREQ9P2R6 1566 aa14.59□□□□□ -0.07
PCDHGB3-201ENST00000576222 DAAM2Q86T65 1068 aa14.58□□□□□ -0.07
PCDHGB3-201ENST00000576222 MICAL1Q8TDZ2 1067 aa14.58□□□□□ -0.07
PCDHGB3-201ENST00000576222 EPHB4P54760 987 aa14.58□□□□□ -0.08
PCDHGB3-201ENST00000576222 KLHL30Q0D2K2 578 aa14.58□□□□□ -0.08
PCDHGB3-201ENST00000576222 APOA5Q6Q788 366 aa14.58□□□□□ -0.08
PCDHGB3-201ENST00000576222 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.58□□□□□ -0.08
PCDHGB3-201ENST00000576222 MCM9Q9NXL9 1143 aa14.58□□□□□ -0.08
PCDHGB3-201ENST00000576222 MTUS1Q9ULD2 1270 aa14.58□□□□□ -0.08
PCDHGB3-201ENST00000576222 RIPOR2Q9Y4F9 1068 aa14.58□□□□□ -0.08
PCDHGB3-201ENST00000576222 ABCA8O94911 1581 aa14.58□□□□□ -0.08
PCDHGB3-201ENST00000576222 COBLO75128 1261 aa14.58□□□□□ -0.08
PCDHGB3-201ENST00000576222 CROCCP2Q86T23 111 aa14.58□□□□□ -0.08
PCDHGB3-201ENST00000576222 SMYD4Q8IYR2 804 aaPredicted RBP14.58□□□□□ -0.08
PCDHGB3-201ENST00000576222 SYMPKQ92797 1274 aaKnown RBP14.58□□□□□ -0.08
PCDHGB3-201ENST00000576222 SLC52A2Q9HAB3 445 aa14.58□□□□□ -0.08
PCDHGB3-201ENST00000576222 MAST3O60307 1309 aa14.58□□□□□ -0.08
PCDHGB3-201ENST00000576222 TNNI2P48788 182 aa14.58□□□□□ -0.08
PCDHGB3-201ENST00000576222 SNCBQ16143 134 aa14.58□□□□□ -0.08
PCDHGB3-201ENST00000576222 CUL5Q93034 780 aa14.58□□□□□ -0.08
PCDHGB3-201ENST00000576222 RRP36Q96EU6 259 aaKnown RBP14.58□□□□□ -0.08
PCDHGB3-201ENST00000576222 JPH2Q9BR39 696 aaPredicted RBP14.58□□□□□ -0.08
PCDHGB3-201ENST00000576222 DCAF8L1A6NGE4 600 aa14.57□□□□□ -0.08
PCDHGB3-201ENST00000576222 ALDH3A1P30838 453 aa14.57□□□□□ -0.08
PCDHGB3-201ENST00000576222 KCNJ6P48051 423 aa14.57□□□□□ -0.08
PCDHGB3-201ENST00000576222 RBM5P52756 815 aaKnown RBP eCLIP14.57□□□□□ -0.08
PCDHGB3-201ENST00000576222 SFMBT2Q5VUG0 894 aa14.57□□□□□ -0.08
PCDHGB3-201ENST00000576222 SRLQ86TD4 932 aa14.57□□□□□ -0.08
PCDHGB3-201ENST00000576222 CRACR2BQ8N4Y2 399 aaPredicted RBP14.57□□□□□ -0.08
PCDHGB3-201ENST00000576222 FANCBQ8NB91 859 aa14.57□□□□□ -0.08
PCDHGB3-201ENST00000576222 IGSF1Q8N6C5 1336 aa14.57□□□□□ -0.08
PCDHGB3-201ENST00000576222 HGSO14964 777 aaPredicted RBP14.57□□□□□ -0.08
PCDHGB3-201ENST00000576222 GCKP35557 465 aa14.57□□□□□ -0.08
PCDHGB3-201ENST00000576222 GUCY2DQ02846 1103 aa14.57□□□□□ -0.08
PCDHGB3-201ENST00000576222 DCAF17Q5H9S7 520 aaPredicted RBP14.57□□□□□ -0.08
PCDHGB3-201ENST00000576222 RPAINQ86UA6 219 aa14.57□□□□□ -0.08
PCDHGB3-201ENST00000576222 CCDC65Q8IXS2 484 aa14.57□□□□□ -0.08
PCDHGB3-201ENST00000576222 ST5P78524 1137 aa14.57□□□□□ -0.08
PCDHGB3-201ENST00000576222 NUCKS1Q9H1E3 243 aaKnown RBP14.57□□□□□ -0.08
PCDHGB3-201ENST00000576222 IKBKGQ9Y6K9 419 aa14.57□□□□□ -0.08
PCDHGB3-201ENST00000576222 IQGAP3Q86VI3 1631 aa14.57□□□□□ -0.08
PCDHGB3-201ENST00000576222 ATP5DP30049 168 aa14.57□□□□□ -0.08
PCDHGB3-201ENST00000576222 ANKRD13CQ8N6S4 541 aa14.57□□□□□ -0.08
PCDHGB3-201ENST00000576222 PPFIBP2Q8ND30 876 aa14.57□□□□□ -0.08
PCDHGB3-201ENST00000576222 STIM2Q9P246 746 aa14.57□□□□□ -0.08
PCDHGB3-201ENST00000576222 MRFAP1Q9Y605 127 aa14.57□□□□□ -0.08
PCDHGB3-201ENST00000576222 BUB1O43683 1085 aa14.56□□□□□ -0.08
PCDHGB3-201ENST00000576222 TNIP1Q15025 636 aa14.56□□□□□ -0.08
PCDHGB3-201ENST00000576222 NYAP1Q6ZVC0 841 aa14.56□□□□□ -0.08
PCDHGB3-201ENST00000576222 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.56□□□□□ -0.08
PCDHGB3-201ENST00000576222 SH3TC1Q8TE82 1336 aa14.56□□□□□ -0.08
PCDHGB3-201ENST00000576222 TRIM66O15016 1216 aa14.56□□□□□ -0.08
PCDHGB3-201ENST00000576222 RPN1P04843 607 aaKnown RBP14.56□□□□□ -0.08
PCDHGB3-201ENST00000576222 PUM3Q15397 648 aaKnown RBP14.56□□□□□ -0.08
PCDHGB3-201ENST00000576222 TARBP1Q13395 1621 aaKnown RBP14.56□□□□□ -0.08
PCDHGB3-201ENST00000576222 NEDD9Q14511 834 aa14.56□□□□□ -0.08
PCDHGB3-201ENST00000576222 PEX26Q7Z412 305 aa14.56□□□□□ -0.08
PCDHGB3-201ENST00000576222 WDR24Q96S15 920 aa14.56□□□□□ -0.08
PCDHGB3-201ENST00000576222 FOXP1Q9H334 677 aaPredicted RBP14.56□□□□□ -0.08
PCDHGB3-201ENST00000576222 ODF2LQ9ULJ1 636 aa14.56□□□□□ -0.08
PCDHGB3-201ENST00000576222 MFAP3LO75121 409 aa14.56□□□□□ -0.08
PCDHGB3-201ENST00000576222 NDUFA10O95299 355 aa14.56□□□□□ -0.08
PCDHGB3-201ENST00000576222 LRRC24Q50LG9 513 aa14.56□□□□□ -0.08
PCDHGB3-201ENST00000576222 TAOK1Q7L7X3 1001 aa14.56□□□□□ -0.08
PCDHGB3-201ENST00000576222 VSIG1Q86XK7 387 aa14.56□□□□□ -0.08
PCDHGB3-201ENST00000576222 AIFM3Q96NN9 605 aa14.56□□□□□ -0.08
PCDHGB3-201ENST00000576222 PNPLA6Q8IY17 1366 aa14.56□□□□□ -0.08
PCDHGB3-201ENST00000576222 SEL1L2Q5TEA6 688 aa14.55□□□□□ -0.08
PCDHGB3-201ENST00000576222 CABP7Q86V35 215 aa14.55□□□□□ -0.08
PCDHGB3-201ENST00000576222 SLF2Q8IX21 1173 aa14.55□□□□□ -0.08
PCDHGB3-201ENST00000576222 CETN3O15182 167 aa14.55□□□□□ -0.08
PCDHGB3-201ENST00000576222 A1BGP04217 495 aa14.55□□□□□ -0.08
PCDHGB3-201ENST00000576222 RPL13P26373 211 aaKnown RBP14.55□□□□□ -0.08
PCDHGB3-201ENST00000576222 TXKP42681 527 aa14.55□□□□□ -0.08
PCDHGB3-201ENST00000576222 PTGDRQ13258 359 aa14.55□□□□□ -0.08
PCDHGB3-201ENST00000576222 DYMQ7RTS9 669 aa14.55□□□□□ -0.08
PCDHGB3-201ENST00000576222 EEF2KMTQ96G04 330 aa14.55□□□□□ -0.08
PCDHGB3-201ENST00000576222 GPHNQ9NQX3 736 aaPredicted RBP14.55□□□□□ -0.08
PCDHGB3-201ENST00000576222 GJB4Q9NTQ9 266 aa14.55□□□□□ -0.08
PCDHGB3-201ENST00000576222 FEZ2Q9UHY8 353 aaPredicted RBP14.55□□□□□ -0.08
PCDHGB3-201ENST00000576222 FAM169AQ9Y6X4 670 aa14.55□□□□□ -0.08
PCDHGB3-201ENST00000576222 MXRA7P84157 204 aa14.55□□□□□ -0.08
PCDHGB3-201ENST00000576222 SIRT1Q96EB6 747 aa14.55□□□□□ -0.08
PCDHGB3-201ENST00000576222 TACO1Q9BSH4 297 aaKnown RBP14.55□□□□□ -0.08
PCDHGB3-201ENST00000576222 HOMER2Q9NSB8 354 aa14.55□□□□□ -0.08
PCDHGB3-201ENST00000576222 KCNK3O14649 394 aa14.54□□□□□ -0.08
PCDHGB3-201ENST00000576222 CCNT1O60563 726 aaKnown RBP14.54□□□□□ -0.08
PCDHGB3-201ENST00000576222 ZPR1O75312 459 aa14.54□□□□□ -0.08
PCDHGB3-201ENST00000576222 PARP1P09874 1014 aaKnown RBP14.54□□□□□ -0.08
PCDHGB3-201ENST00000576222 C2orf54Q08AI8 447 aa14.54□□□□□ -0.08
PCDHGB3-201ENST00000576222 ARHGEF25Q86VW2 580 aa14.54□□□□□ -0.08
PCDHGB3-201ENST00000576222 IFNL3Q8IZI9 196 aa14.54□□□□□ -0.08
PCDHGB3-201ENST00000576222 ALDH8A1Q9H2A2 487 aaPredicted RBP14.54□□□□□ -0.08
PCDHGB3-201ENST00000576222 PLCB1Q9NQ66 1216 aa14.54□□□□□ -0.08
PCDHGB3-201ENST00000576222 FAM184BQ9ULE4 1060 aa14.54□□□□□ -0.08
PCDHGB3-201ENST00000576222 GBP1P32455 592 aa14.54□□□□□ -0.08
PCDHGB3-201ENST00000576222 HS2ST1Q7LGA3 356 aa14.54□□□□□ -0.08
PCDHGB3-201ENST00000576222 TUBGCP2Q9BSJ2 902 aa14.54□□□□□ -0.08
PCDHGB3-201ENST00000576222 MYO5CQ9NQX4 1742 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms