RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 MAPKAPK5Q8IW41 473 aa7.25□□□□□ -1.25
SMG6-219ENST00000575663 ABRAQ8N0Z2 381 aa7.25□□□□□ -1.25
SMG6-219ENST00000575663 SPATA5Q8NB90 893 aa7.25□□□□□ -1.25
SMG6-219ENST00000575663 SHCBP1Q8NEM2 672 aa7.25□□□□□ -1.25
SMG6-219ENST00000575663 SH3RF3Q8TEJ3 882 aaPredicted RBP7.25□□□□□ -1.25
SMG6-219ENST00000575663 HERVK_113Q902F9 699 aa7.25□□□□□ -1.25
SMG6-219ENST00000575663 KIAA1683Q9H0B3 1180 aa7.25□□□□□ -1.25
SMG6-219ENST00000575663 RPAP3Q9H6T3 665 aaPredicted RBP7.25□□□□□ -1.25
SMG6-219ENST00000575663 LRP2BPQ9P2M1 347 aa7.25□□□□□ -1.25
SMG6-219ENST00000575663 RLFQ13129 1914 aa7.25□□□□□ -1.25
SMG6-219ENST00000575663 MYH2Q9UKX2 1941 aa7.25□□□□□ -1.25
SMG6-219ENST00000575663 ZNF236Q9UL36 1845 aa7.24□□□□□ -1.25
SMG6-219ENST00000575663 A0A1B0GUL7 405 aa7.24□□□□□ -1.25
SMG6-219ENST00000575663 MOXD2PA6NHM9 499 aa7.24□□□□□ -1.25
SMG6-219ENST00000575663 GRXCR1A8MXD5 290 aa7.24□□□□□ -1.25
SMG6-219ENST00000575663 ERC2O15083 957 aa7.24□□□□□ -1.25
SMG6-219ENST00000575663 TLR3O15455 904 aaKnown RBP7.24□□□□□ -1.25
SMG6-219ENST00000575663 GTPBP6O43824 516 aaPredicted RBP7.24□□□□□ -1.25
SMG6-219ENST00000575663 GPR37L1O60883 481 aa7.24□□□□□ -1.25
SMG6-219ENST00000575663 PGK1P00558 417 aa7.24□□□□□ -1.25
SMG6-219ENST00000575663 UBTFL1P0CB47 393 aaPredicted RBP7.24□□□□□ -1.25
SMG6-219ENST00000575663 AKR1A1P14550 325 aa7.24□□□□□ -1.25
SMG6-219ENST00000575663 ERCC3P19447 782 aa7.24□□□□□ -1.25
SMG6-219ENST00000575663 KCNQ1P51787 676 aa7.24□□□□□ -1.25
SMG6-219ENST00000575663 JAG1P78504 1218 aa7.24□□□□□ -1.25
SMG6-219ENST00000575663 TFF2Q03403 129 aa7.24□□□□□ -1.25
SMG6-219ENST00000575663 RAB3GAP1Q15042 981 aa7.24□□□□□ -1.25
SMG6-219ENST00000575663 SHROOM1Q2M3G4 852 aaPredicted RBP7.24□□□□□ -1.25
SMG6-219ENST00000575663 TMEM240Q5SV17 173 aa7.24□□□□□ -1.25
SMG6-219ENST00000575663 GORABQ5T7V8 394 aa7.24□□□□□ -1.25
SMG6-219ENST00000575663 RASIP1Q5U651 963 aa7.24□□□□□ -1.25
SMG6-219ENST00000575663 NAA16Q6N069 864 aaPredicted RBP7.24□□□□□ -1.25
SMG6-219ENST00000575663 NCAPG2Q86XI2 1143 aa7.24□□□□□ -1.25
SMG6-219ENST00000575663 MB21D1Q8N884 522 aa7.24□□□□□ -1.25
SMG6-219ENST00000575663 ZNF384Q8TF68 577 aa7.24□□□□□ -1.25
SMG6-219ENST00000575663 TGFBRAP1Q8WUH2 860 aa7.24□□□□□ -1.25
SMG6-219ENST00000575663 XAGE2Q96GT9 111 aa7.24□□□□□ -1.25
SMG6-219ENST00000575663 MAML3Q96JK9 1138 aa7.24□□□□□ -1.25
SMG6-219ENST00000575663 GLT1D1Q96MS3 346 aa7.24□□□□□ -1.25
SMG6-219ENST00000575663 TSEN34Q9BSV6 310 aaKnown RBP7.24□□□□□ -1.25
SMG6-219ENST00000575663 MOV10L1Q9BXT6 1211 aaKnown RBP7.24□□□□□ -1.25
SMG6-219ENST00000575663 SPATC1LQ9H0A9 340 aa7.24□□□□□ -1.25
SMG6-219ENST00000575663 USP44Q9H0E7 712 aa7.24□□□□□ -1.25
SMG6-219ENST00000575663 NKX2-4Q9H2Z4 354 aa7.24□□□□□ -1.25
SMG6-219ENST00000575663 MROH8Q9H579 483 aa7.24□□□□□ -1.25
SMG6-219ENST00000575663 AATFQ9NY61 560 aaKnown RBP eCLIP7.24□□□□□ -1.25
SMG6-219ENST00000575663 TBX21Q9UL17 535 aa7.24□□□□□ -1.25
SMG6-219ENST00000575663 PALD1Q9ULE6 856 aa7.24□□□□□ -1.25
SMG6-219ENST00000575663 COG5Q9UP83 839 aa7.24□□□□□ -1.25
SMG6-219ENST00000575663 HDAC5Q9UQL6 1122 aa7.24□□□□□ -1.25
SMG6-219ENST00000575663 ZNF521Q96K83 1311 aa7.24□□□□□ -1.25
SMG6-219ENST00000575663 FCER1AP12319 257 aa7.23□□□□□ -1.25
SMG6-219ENST00000575663 CSF2RAP15509 400 aa7.23□□□□□ -1.25
SMG6-219ENST00000575663 PLS1Q14651 629 aa7.23□□□□□ -1.25
SMG6-219ENST00000575663 PRAMEF19Q5SWL8 479 aa7.23□□□□□ -1.25
SMG6-219ENST00000575663 TANGO6Q9C0B7 1094 aa7.23□□□□□ -1.25
SMG6-219ENST00000575663 EPHX3Q9H6B9 360 aa7.23□□□□□ -1.25
SMG6-219ENST00000575663 CABP5Q9NP86 173 aa7.23□□□□□ -1.25
SMG6-219ENST00000575663 HOXC10Q9NYD6 342 aa7.23□□□□□ -1.25
SMG6-219ENST00000575663 HMG20BQ9P0W2 317 aa7.23□□□□□ -1.25
SMG6-219ENST00000575663 CNPY2Q9Y2B0 182 aa7.23□□□□□ -1.25
SMG6-219ENST00000575663 SALL2Q9Y467 1007 aaPredicted RBP7.23□□□□□ -1.25
SMG6-219ENST00000575663 FAM86C2PA6NEL3 165 aa7.22□□□□□ -1.25
SMG6-219ENST00000575663 PRR33A8MZF0 331 aa7.22□□□□□ -1.25
SMG6-219ENST00000575663 COBLO75128 1261 aa7.22□□□□□ -1.25
SMG6-219ENST00000575663 ARID4AP29374 1257 aaPredicted RBP7.22□□□□□ -1.25
SMG6-219ENST00000575663 MRE11P49959 708 aa7.22□□□□□ -1.25
SMG6-219ENST00000575663 ACLYP53396 1101 aa7.22□□□□□ -1.25
SMG6-219ENST00000575663 TIMM10P62072 90 aa7.22□□□□□ -1.25
SMG6-219ENST00000575663 COG2Q14746 738 aa7.22□□□□□ -1.25
SMG6-219ENST00000575663 ABCB5Q2M3G0 1257 aa7.22□□□□□ -1.25
SMG6-219ENST00000575663 CERKLQ49MI3 558 aaPredicted RBP7.22□□□□□ -1.25
SMG6-219ENST00000575663 PI16Q6UXB8 463 aa7.22□□□□□ -1.25
SMG6-219ENST00000575663 TBC1D9Q6ZT07 1266 aa7.22□□□□□ -1.25
SMG6-219ENST00000575663 ZNF365Q70YC5 407 aa7.22□□□□□ -1.25
SMG6-219ENST00000575663 CERS3Q8IU89 383 aa7.22□□□□□ -1.25
SMG6-219ENST00000575663 NEUROD6Q96NK8 337 aa7.22□□□□□ -1.25
SMG6-219ENST00000575663 PPP1R12CQ9BZL4 782 aa7.22□□□□□ -1.25
SMG6-219ENST00000575663 EHD4Q9H223 541 aa7.22□□□□□ -1.25
SMG6-219ENST00000575663 SPC25Q9HBM1 224 aa7.22□□□□□ -1.25
SMG6-219ENST00000575663 IL23AQ9NPF7 189 aa7.22□□□□□ -1.25
SMG6-219ENST00000575663 COPRSQ9NQ92 184 aa7.22□□□□□ -1.25
SMG6-219ENST00000575663 SAP30BPQ9UHR5 308 aaKnown RBP7.22□□□□□ -1.25
SMG6-219ENST00000575663 SERPINB13Q9UIV8 391 aa7.22□□□□□ -1.25
SMG6-219ENST00000575663 PA2G4Q9UQ80 394 aaKnown RBP7.22□□□□□ -1.25
SMG6-219ENST00000575663 ELP1O95163 1332 aa7.22□□□□□ -1.25
SMG6-219ENST00000575663 SYNRGQ9UMZ2 1314 aa7.22□□□□□ -1.25
SMG6-219ENST00000575663 A0A0U1RQG5 324 aaPredicted RBP7.21□□□□□ -1.26
SMG6-219ENST00000575663 EIF5BO60841 1220 aaKnown RBP7.21□□□□□ -1.26
SMG6-219ENST00000575663 IGSF3O75054 1194 aa7.21□□□□□ -1.26
SMG6-219ENST00000575663 ADAMTS4O75173 837 aa7.21□□□□□ -1.26
SMG6-219ENST00000575663 SLC25A27O95847 323 aa7.21□□□□□ -1.26
SMG6-219ENST00000575663 FGBP02675 491 aa7.21□□□□□ -1.26
SMG6-219ENST00000575663 UQCRFS1P1P0C7P4 283 aa7.21□□□□□ -1.26
SMG6-219ENST00000575663 ACRP10323 421 aa7.21□□□□□ -1.26
SMG6-219ENST00000575663 PPP4CP60510 307 aa7.21□□□□□ -1.26
SMG6-219ENST00000575663 KCTD2Q14681 263 aa7.21□□□□□ -1.26
SMG6-219ENST00000575663 TATDN1Q6P1N9 297 aa7.21□□□□□ -1.26
SMG6-219ENST00000575663 MRPL50Q8N5N7 158 aaKnown RBP7.21□□□□□ -1.26
SMG6-219ENST00000575663 PCSK9Q8NBP7 692 aaKnown RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms