RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 HOXC10Q9NYD6 342 aa12.17□□□□□ -0.46
CALCOCO2-227ENST00000575560 NOP58Q9Y2X3 529 aaKnown RBP12.17□□□□□ -0.46
CALCOCO2-227ENST00000575560 A0A1W2PRG0 241 aa12.16□□□□□ -0.46
CALCOCO2-227ENST00000575560 COBLO75128 1261 aa12.16□□□□□ -0.46
CALCOCO2-227ENST00000575560 SURF6O75683 361 aaKnown RBP12.16□□□□□ -0.46
CALCOCO2-227ENST00000575560 IDH1O75874 414 aaKnown RBP12.16□□□□□ -0.46
CALCOCO2-227ENST00000575560 GABPAQ06546 454 aa12.16□□□□□ -0.46
CALCOCO2-227ENST00000575560 TMED8Q6PL24 325 aaPredicted RBP12.16□□□□□ -0.46
CALCOCO2-227ENST00000575560 MAGEB6Q8N7X4 407 aa12.16□□□□□ -0.46
CALCOCO2-227ENST00000575560 SHCBP1Q8NEM2 672 aa12.16□□□□□ -0.46
CALCOCO2-227ENST00000575560 MAFAQ8NHW3 353 aaPredicted RBP12.16□□□□□ -0.46
CALCOCO2-227ENST00000575560 BADQ92934 168 aa12.16□□□□□ -0.46
CALCOCO2-227ENST00000575560 TTYH1Q9H313 450 aaPredicted RBP12.16□□□□□ -0.46
CALCOCO2-227ENST00000575560 TLR7Q9NYK1 1049 aaKnown RBP12.16□□□□□ -0.46
CALCOCO2-227ENST00000575560 MYO5AQ9Y4I1 1855 aaKnown RBP12.15□□□□□ -0.46
CALCOCO2-227ENST00000575560 TRIM43BA6NCK2 446 aa12.15□□□□□ -0.46
CALCOCO2-227ENST00000575560 KBTBD13C9JR72 458 aa12.15□□□□□ -0.46
CALCOCO2-227ENST00000575560 BCAR3O75815 825 aa12.15□□□□□ -0.46
CALCOCO2-227ENST00000575560 MYCNP04198 464 aaPredicted RBP12.15□□□□□ -0.46
CALCOCO2-227ENST00000575560 CACNB1Q02641 598 aaPredicted RBP12.15□□□□□ -0.46
CALCOCO2-227ENST00000575560 OS9Q13438 667 aaPredicted RBP12.15□□□□□ -0.46
CALCOCO2-227ENST00000575560 SEPT2Q15019 361 aa12.15□□□□□ -0.46
CALCOCO2-227ENST00000575560 TRIM60Q495X7 471 aa12.15□□□□□ -0.46
CALCOCO2-227ENST00000575560 ANO1Q5XXA6 986 aa12.15□□□□□ -0.46
CALCOCO2-227ENST00000575560 SH3RF1Q7Z6J0 888 aa12.15□□□□□ -0.46
CALCOCO2-227ENST00000575560 CLUAP1Q96AJ1 413 aa12.15□□□□□ -0.46
CALCOCO2-227ENST00000575560 TRIM43Q96BQ3 446 aaPredicted RBP12.15□□□□□ -0.46
CALCOCO2-227ENST00000575560 EAF2Q96CJ1 260 aaPredicted RBP12.15□□□□□ -0.46
CALCOCO2-227ENST00000575560 RIOK1Q9BRS2 568 aaKnown RBP12.15□□□□□ -0.46
CALCOCO2-227ENST00000575560 SPATC1LQ9H0A9 340 aa12.15□□□□□ -0.46
CALCOCO2-227ENST00000575560 CCDC8Q9H0W5 538 aaPredicted RBP12.15□□□□□ -0.46
CALCOCO2-227ENST00000575560 PDLIM7Q9NR12 457 aa12.15□□□□□ -0.46
CALCOCO2-227ENST00000575560 LTBP2Q14767 1821 aa12.15□□□□□ -0.46
CALCOCO2-227ENST00000575560 RLFQ13129 1914 aa12.15□□□□□ -0.46
CALCOCO2-227ENST00000575560 ERCC3P19447 782 aa12.14□□□□□ -0.47
CALCOCO2-227ENST00000575560 ADCYAP1R1P41586 468 aa12.14□□□□□ -0.47
CALCOCO2-227ENST00000575560 MAP3K12Q12852 859 aa12.14□□□□□ -0.47
CALCOCO2-227ENST00000575560 LRRC41Q15345 812 aa12.14□□□□□ -0.47
CALCOCO2-227ENST00000575560 KIAA1755Q5JYT7 1200 aa12.14□□□□□ -0.47
CALCOCO2-227ENST00000575560 PRAMEF19Q5SWL8 479 aa12.14□□□□□ -0.47
CALCOCO2-227ENST00000575560 ABRAQ8N0Z2 381 aa12.14□□□□□ -0.47
CALCOCO2-227ENST00000575560 TMEM57Q8N5G2 664 aa12.14□□□□□ -0.47
CALCOCO2-227ENST00000575560 MYLIPQ8WY64 445 aa12.14□□□□□ -0.47
CALCOCO2-227ENST00000575560 FRAT1Q92837 279 aaPredicted RBP12.14□□□□□ -0.47
CALCOCO2-227ENST00000575560 MROH8Q9H579 483 aa12.14□□□□□ -0.47
CALCOCO2-227ENST00000575560 ANTXR1Q9H6X2 564 aa12.14□□□□□ -0.47
CALCOCO2-227ENST00000575560 PRDM5Q9NQX1 630 aaPredicted RBP12.14□□□□□ -0.47
CALCOCO2-227ENST00000575560 MYH1P12882 1939 aa12.13□□□□□ -0.47
CALCOCO2-227ENST00000575560 TTC28Q96AY4 2481 aa12.13□□□□□ -0.47
CALCOCO2-227ENST00000575560 ITGB8P26012 769 aa12.13□□□□□ -0.47
CALCOCO2-227ENST00000575560 DSG3P32926 999 aa12.13□□□□□ -0.47
CALCOCO2-227ENST00000575560 TLE2Q04725 743 aa12.13□□□□□ -0.47
CALCOCO2-227ENST00000575560 SIAH1Q8IUQ4 282 aa12.13□□□□□ -0.47
CALCOCO2-227ENST00000575560 MB21D1Q8N884 522 aa12.13□□□□□ -0.47
CALCOCO2-227ENST00000575560 FERMT2Q96AC1 680 aa12.13□□□□□ -0.47
CALCOCO2-227ENST00000575560 MAML3Q96JK9 1138 aa12.13□□□□□ -0.47
CALCOCO2-227ENST00000575560 PRDM6Q9NQX0 595 aa12.13□□□□□ -0.47
CALCOCO2-227ENST00000575560 SLC5A4Q9NY91 659 aa12.13□□□□□ -0.47
CALCOCO2-227ENST00000575560 ZNF236Q9UL36 1845 aa12.12□□□□□ -0.47
CALCOCO2-227ENST00000575560 POLR3DP05423 398 aaPredicted RBP12.12□□□□□ -0.47
CALCOCO2-227ENST00000575560 EPHB4P54760 987 aa12.12□□□□□ -0.47
CALCOCO2-227ENST00000575560 EVX2Q03828 476 aa12.12□□□□□ -0.47
CALCOCO2-227ENST00000575560 FAM47AQ5JRC9 791 aa12.12□□□□□ -0.47
CALCOCO2-227ENST00000575560 TANGO6Q9C0B7 1094 aa12.12□□□□□ -0.47
CALCOCO2-227ENST00000575560 PHF24Q9UPV7 400 aa12.12□□□□□ -0.47
CALCOCO2-227ENST00000575560 TACC3Q9Y6A5 838 aa12.12□□□□□ -0.47
CALCOCO2-227ENST00000575560 TMEM265A0A087WTH1 108 aa12.11□□□□□ -0.47
CALCOCO2-227ENST00000575560 KIAA0355O15063 1070 aa12.11□□□□□ -0.47
CALCOCO2-227ENST00000575560 NCAPG2Q86XI2 1143 aa12.11□□□□□ -0.47
CALCOCO2-227ENST00000575560 NRBP1Q9UHY1 535 aa12.11□□□□□ -0.47
CALCOCO2-227ENST00000575560 ADAMTS5Q9UNA0 930 aa12.11□□□□□ -0.47
CALCOCO2-227ENST00000575560 CHD9Q3L8U1 2897 aa12.1□□□□□ -0.47
CALCOCO2-227ENST00000575560 MAGEB6P1A0A0J9YX57 407 aa12.1□□□□□ -0.47
CALCOCO2-227ENST00000575560 MPHOSPH10O00566 681 aaKnown RBP12.1□□□□□ -0.47
CALCOCO2-227ENST00000575560 FCER1AP12319 257 aa12.1□□□□□ -0.47
CALCOCO2-227ENST00000575560 FOSL2P15408 326 aa12.1□□□□□ -0.47
CALCOCO2-227ENST00000575560 PLS1Q14651 629 aa12.1□□□□□ -0.47
CALCOCO2-227ENST00000575560 TMEM132BQ14DG7 1078 aa12.1□□□□□ -0.47
CALCOCO2-227ENST00000575560 TMEM179Q6ZVK1 233 aa12.1□□□□□ -0.47
CALCOCO2-227ENST00000575560 SYMPKQ92797 1274 aaKnown RBP12.1□□□□□ -0.47
CALCOCO2-227ENST00000575560 ATG4CQ96DT6 458 aa12.1□□□□□ -0.47
CALCOCO2-227ENST00000575560 C1orf115Q9H7X2 142 aa12.1□□□□□ -0.47
CALCOCO2-227ENST00000575560 MCM9Q9NXL9 1143 aa12.1□□□□□ -0.47
CALCOCO2-227ENST00000575560 TMX2Q9Y320 296 aa12.1□□□□□ -0.47
CALCOCO2-227ENST00000575560 SLC25A27O95847 323 aa12.09□□□□□ -0.47
CALCOCO2-227ENST00000575560 CLTBP09497 229 aa12.09□□□□□ -0.47
CALCOCO2-227ENST00000575560 RARBP10826 455 aa12.09□□□□□ -0.47
CALCOCO2-227ENST00000575560 GRIN2CQ14957 1233 aa12.09□□□□□ -0.47
CALCOCO2-227ENST00000575560 SLC9C2Q5TAH2 1124 aa12.09□□□□□ -0.47
CALCOCO2-227ENST00000575560 ZKSCAN2Q63HK3 967 aa12.09□□□□□ -0.47
CALCOCO2-227ENST00000575560 RNF180Q86T96 592 aa12.09□□□□□ -0.47
CALCOCO2-227ENST00000575560 RNPC3Q96LT9 517 aaKnown RBP12.09□□□□□ -0.47
CALCOCO2-227ENST00000575560 TINF2Q9BSI4 451 aa12.09□□□□□ -0.47
CALCOCO2-227ENST00000575560 CRNKL1Q9BZJ0 848 aaKnown RBP12.09□□□□□ -0.47
CALCOCO2-227ENST00000575560 DCP1AQ9NPI6 582 aaPredicted RBP12.09□□□□□ -0.47
CALCOCO2-227ENST00000575560 XPNPEP3Q9NQH7 507 aa12.09□□□□□ -0.47
CALCOCO2-227ENST00000575560 DIS3Q9Y2L1 958 aaKnown RBP12.09□□□□□ -0.47
CALCOCO2-227ENST00000575560 A0A0G2JMZ2 1700 aa12.08□□□□□ -0.47
CALCOCO2-227ENST00000575560 A0A1W2PQ45 241 aaPredicted RBP12.08□□□□□ -0.48
CALCOCO2-227ENST00000575560 A0A1W2PQY0 241 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms