RNA–Protein interactions for RNA: ENST00000573603.1

POLR2A-202, Transcript of RNA polymerase II subunit A, humanhuman

TSL 2

Gene POLR2A, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-202ENST00000573603 LHX8Q68G74 356 aa14.95□□□□□ -0.02
POLR2A-202ENST00000573603 LBX2Q6XYB7 198 aa14.95□□□□□ -0.02
POLR2A-202ENST00000573603 GDF15Q99988 308 aa14.95□□□□□ -0.02
POLR2A-202ENST00000573603 RLFQ13129 1914 aa14.95□□□□□ -0.02
POLR2A-202ENST00000573603 PARP14Q460N5 1801 aa14.94□□□□□ -0.02
POLR2A-202ENST00000573603 CYP2D7A0A087X1C5 515 aa14.94□□□□□ -0.02
POLR2A-202ENST00000573603 RAB11FIP3O75154 756 aa14.94□□□□□ -0.02
POLR2A-202ENST00000573603 CHGBP05060 677 aa14.94□□□□□ -0.02
POLR2A-202ENST00000573603 AKR1B1P15121 316 aa14.94□□□□□ -0.02
POLR2A-202ENST00000573603 CNGA1P29973 690 aa14.94□□□□□ -0.02
POLR2A-202ENST00000573603 ADD2P35612 726 aa14.94□□□□□ -0.02
POLR2A-202ENST00000573603 MAGEA10P43363 369 aaPredicted RBP14.94□□□□□ -0.02
POLR2A-202ENST00000573603 GRB14Q14449 540 aa14.94□□□□□ -0.02
POLR2A-202ENST00000573603 SAMD1Q6SPF0 538 aaPredicted RBP14.94□□□□□ -0.02
POLR2A-202ENST00000573603 TMEM179Q6ZVK1 233 aa14.94□□□□□ -0.02
POLR2A-202ENST00000573603 NPLOC4Q8TAT6 608 aa14.94□□□□□ -0.02
POLR2A-202ENST00000573603 SMIM22K7EJ46 135 aa14.93□□□□□ -0.02
POLR2A-202ENST00000573603 COL6A1P12109 1028 aa14.93□□□□□ -0.02
POLR2A-202ENST00000573603 CYP2C19P33261 490 aa14.93□□□□□ -0.02
POLR2A-202ENST00000573603 ATP2B2Q01814 1243 aa14.93□□□□□ -0.02
POLR2A-202ENST00000573603 ICA1Q05084 483 aa14.93□□□□□ -0.02
POLR2A-202ENST00000573603 LRRC26Q2I0M4 334 aa14.93□□□□□ -0.02
POLR2A-202ENST00000573603 KIAA1755Q5JYT7 1200 aa14.93□□□□□ -0.02
POLR2A-202ENST00000573603 SPICE1Q8N0Z3 855 aa14.93□□□□□ -0.02
POLR2A-202ENST00000573603 MOV10L1Q9BXT6 1211 aaKnown RBP14.93□□□□□ -0.02
POLR2A-202ENST00000573603 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.93□□□□□ -0.021e-6■■□□□ 12.5
POLR2A-202ENST00000573603 SWAP70Q9UH65 585 aa14.93□□□□□ -0.02
POLR2A-202ENST00000573603 COL11A1P12107 1806 aaPredicted RBP14.92□□□□□ -0.02
POLR2A-202ENST00000573603 ATP5JP18859 108 aa14.92□□□□□ -0.02
POLR2A-202ENST00000573603 BMP8BP34820 402 aa14.92□□□□□ -0.02
POLR2A-202ENST00000573603 PLS1Q14651 629 aa14.92□□□□□ -0.02
POLR2A-202ENST00000573603 COG2Q14746 738 aa14.92□□□□□ -0.02
POLR2A-202ENST00000573603 HAUS7Q99871 368 aa14.92□□□□□ -0.02
POLR2A-202ENST00000573603 SPATC1LQ9H0A9 340 aa14.92□□□□□ -0.02
POLR2A-202ENST00000573603 ARHGEF10LQ9HCE6 1279 aa14.92□□□□□ -0.02
POLR2A-202ENST00000573603 ATP8A2Q9NTI2 1148 aa14.92□□□□□ -0.02
POLR2A-202ENST00000573603 DDX20Q9UHI6 824 aaKnown RBP14.92□□□□□ -0.02
POLR2A-202ENST00000573603 SMARCA5O60264 1052 aaPredicted RBP14.91□□□□□ -0.02
POLR2A-202ENST00000573603 FLOT1O75955 427 aa14.91□□□□□ -0.02
POLR2A-202ENST00000573603 HOXC6P09630 235 aa14.91□□□□□ -0.02
POLR2A-202ENST00000573603 ADORA2AP29274 412 aa14.91□□□□□ -0.02
POLR2A-202ENST00000573603 DPP9Q86TI2 863 aa14.91□□□□□ -0.02
POLR2A-202ENST00000573603 AMOTL1Q8IY63 956 aa14.91□□□□□ -0.02
POLR2A-202ENST00000573603 TRPV1Q8NER1 839 aa14.91□□□□□ -0.02
POLR2A-202ENST00000573603 ATG4CQ96DT6 458 aa14.91□□□□□ -0.02
POLR2A-202ENST00000573603 UBE2OQ9C0C9 1292 aaKnown RBP14.91□□□□□ -0.02
POLR2A-202ENST00000573603 RCAN3Q9UKA8 241 aa14.91□□□□□ -0.02
POLR2A-202ENST00000573603 ERCC3P19447 782 aa14.9□□□□□ -0.02
POLR2A-202ENST00000573603 CDK8P49336 464 aa14.9□□□□□ -0.02
POLR2A-202ENST00000573603 C20orf194Q5TEA3 1177 aa14.9□□□□□ -0.02
POLR2A-202ENST00000573603 ANO1Q5XXA6 986 aa14.9□□□□□ -0.02
POLR2A-202ENST00000573603 NCAPG2Q86XI2 1143 aa14.9□□□□□ -0.02
POLR2A-202ENST00000573603 LPAR1Q92633 364 aa14.9□□□□□ -0.02
POLR2A-202ENST00000573603 DDRGK1Q96HY6 314 aa14.9□□□□□ -0.02
POLR2A-202ENST00000573603 SENP6Q9GZR1 1112 aaPredicted RBP14.9□□□□□ -0.02
POLR2A-202ENST00000573603 CHMP4BQ9H444 224 aaKnown RBP14.9□□□□□ -0.02
POLR2A-202ENST00000573603 SH2D4AQ9H788 454 aa14.9□□□□□ -0.02
POLR2A-202ENST00000573603 HOXC10Q9NYD6 342 aa14.9□□□□□ -0.02
POLR2A-202ENST00000573603 SLC4A4Q9Y6R1 1079 aa14.9□□□□□ -0.02
POLR2A-202ENST00000573603 USP17L12C9JPN9 530 aa14.89□□□□□ -0.03
POLR2A-202ENST00000573603 USP17L21D6R901 530 aa14.89□□□□□ -0.03
POLR2A-202ENST00000573603 RAD21O60216 631 aa14.89□□□□□ -0.03
POLR2A-202ENST00000573603 MSCO60682 206 aa14.89□□□□□ -0.03
POLR2A-202ENST00000573603 CYBAP13498 195 aa14.89□□□□□ -0.03
POLR2A-202ENST00000573603 DSG3P32926 999 aa14.89□□□□□ -0.03
POLR2A-202ENST00000573603 ATN1P54259 1190 aaPredicted RBP14.89□□□□□ -0.03
POLR2A-202ENST00000573603 MDM2Q00987 491 aaPredicted RBP14.89□□□□□ -0.03
POLR2A-202ENST00000573603 UBE3CQ15386 1083 aa14.89□□□□□ -0.03
POLR2A-202ENST00000573603 C12orf60Q5U649 245 aa14.89□□□□□ -0.03
POLR2A-202ENST00000573603 C16orf86Q6ZW13 317 aa14.89□□□□□ -0.03
POLR2A-202ENST00000573603 SIAH1Q8IUQ4 282 aa14.89□□□□□ -0.03
POLR2A-202ENST00000573603 TDHQ8IZJ6 230 aa14.89□□□□□ -0.03
POLR2A-202ENST00000573603 SHCBP1Q8NEM2 672 aa14.89□□□□□ -0.03
POLR2A-202ENST00000573603 LRRCC1Q9C099 1032 aa14.89□□□□□ -0.03
POLR2A-202ENST00000573603 VCPKMTQ9H867 229 aa14.89□□□□□ -0.03
POLR2A-202ENST00000573603 TMX2Q9Y320 296 aa14.89□□□□□ -0.03
POLR2A-202ENST00000573603 LAMA3Q16787 3333 aa14.89□□□□□ -0.03
POLR2A-202ENST00000573603 WDR46O15213 610 aaKnown RBP14.88□□□□□ -0.03
POLR2A-202ENST00000573603 MYCNP04198 464 aaPredicted RBP14.88□□□□□ -0.03
POLR2A-202ENST00000573603 MB21D1Q8N884 522 aa14.88□□□□□ -0.03
POLR2A-202ENST00000573603 CCDC17Q96LX7 622 aa14.88□□□□□ -0.03
POLR2A-202ENST00000573603 PUS7LQ9H0K6 701 aaKnown RBP14.88□□□□□ -0.03
POLR2A-202ENST00000573603 LTBP2Q14767 1821 aa14.87□□□□□ -0.03
POLR2A-202ENST00000573603 DNM1LO00429 736 aa14.87□□□□□ -0.03
POLR2A-202ENST00000573603 STRNO43815 780 aa14.87□□□□□ -0.03
POLR2A-202ENST00000573603 COBLO75128 1261 aa14.87□□□□□ -0.03
POLR2A-202ENST00000573603 EEF2P13639 858 aaKnown RBP14.87□□□□□ -0.03
POLR2A-202ENST00000573603 GJC2Q5T442 439 aaPredicted RBP14.87□□□□□ -0.03
POLR2A-202ENST00000573603 OLFML2BQ68BL8 750 aa14.87□□□□□ -0.03
POLR2A-202ENST00000573603 ZSCAN25Q6NSZ9 544 aa14.87□□□□□ -0.03
POLR2A-202ENST00000573603 CTR9Q6PD62 1173 aa14.87□□□□□ -0.03
POLR2A-202ENST00000573603 Q7L0L9 218 aa14.87□□□□□ -0.03
POLR2A-202ENST00000573603 STK11IPQ8N1F8 1099 aa14.87□□□□□ -0.03
POLR2A-202ENST00000573603 MROH8Q9H579 483 aa14.87□□□□□ -0.03
POLR2A-202ENST00000573603 FBXO28Q9NVF7 368 aa14.87□□□□□ -0.03
POLR2A-202ENST00000573603 GREB1LQ9C091 1923 aaPredicted RBP14.87□□□□□ -0.03
POLR2A-202ENST00000573603 PLXNA1Q9UIW2 1896 aa14.86□□□□□ -0.03
POLR2A-202ENST00000573603 TMEM132BQ14DG7 1078 aa14.86□□□□□ -0.03
POLR2A-202ENST00000573603 PRAMEF19Q5SWL8 479 aa14.86□□□□□ -0.03
POLR2A-202ENST00000573603 TSHZ3Q63HK5 1081 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms