RNA–Protein interactions for RNA: ENST00000573212.5

NPLOC4-211, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-211ENST00000573212 PDIA4P13667 645 aaKnown RBP9.96□□□□□ -0.82
NPLOC4-211ENST00000573212 RGS2P41220 211 aa9.96□□□□□ -0.82
NPLOC4-211ENST00000573212 GTF3C2Q8WUA4 911 aaPredicted RBP9.96□□□□□ -0.82
NPLOC4-211ENST00000573212 TGFBRAP1Q8WUH2 860 aa9.96□□□□□ -0.82
NPLOC4-211ENST00000573212 EDC3Q96F86 508 aaKnown RBP9.96□□□□□ -0.82
NPLOC4-211ENST00000573212 C12orf42Q96LP6 360 aa9.96□□□□□ -0.82
NPLOC4-211ENST00000573212 FAM217BQ9NTX9 383 aaPredicted RBP9.96□□□□□ -0.82
NPLOC4-211ENST00000573212 AATFQ9NY61 560 aaKnown RBP eCLIP9.96□□□□□ -0.82
NPLOC4-211ENST00000573212 LRP2BPQ9P2M1 347 aa9.96□□□□□ -0.82
NPLOC4-211ENST00000573212 RABGAP1Q9Y3P9 1069 aa9.96□□□□□ -0.82
NPLOC4-211ENST00000573212 PLXNB2O15031 1838 aa9.96□□□□□ -0.82
NPLOC4-211ENST00000573212 CYP2E1P05181 493 aaPredicted RBP9.95□□□□□ -0.82
NPLOC4-211ENST00000573212 HOXC6P09630 235 aa9.95□□□□□ -0.82
NPLOC4-211ENST00000573212 ZKSCAN1P17029 563 aaPredicted RBP9.95□□□□□ -0.82
NPLOC4-211ENST00000573212 PTPREP23469 700 aa9.95□□□□□ -0.82
NPLOC4-211ENST00000573212 RARSP54136 660 aaKnown RBP9.95□□□□□ -0.82
NPLOC4-211ENST00000573212 PDE3AQ14432 1141 aa9.95□□□□□ -0.82
NPLOC4-211ENST00000573212 GORABQ5T7V8 394 aa9.95□□□□□ -0.82
NPLOC4-211ENST00000573212 NAA16Q6N069 864 aaPredicted RBP9.95□□□□□ -0.82
NPLOC4-211ENST00000573212 USP17L2Q6R6M4 530 aa9.95□□□□□ -0.82
NPLOC4-211ENST00000573212 ADGRA1Q86SQ6 560 aa9.95□□□□□ -0.82
NPLOC4-211ENST00000573212 MAPKAPK5Q8IW41 473 aa9.95□□□□□ -0.82
NPLOC4-211ENST00000573212 ZNF512BQ96KM6 892 aaPredicted RBP9.95□□□□□ -0.82
NPLOC4-211ENST00000573212 GUCD1Q96NT3 240 aa9.95□□□□□ -0.82
NPLOC4-211ENST00000573212 GPR108Q9NPR9 543 aa9.95□□□□□ -0.82
NPLOC4-211ENST00000573212 FLRT1Q9NZU1 646 aa9.95□□□□□ -0.82
NPLOC4-211ENST00000573212 METRNQ9UJH8 293 aa9.95□□□□□ -0.82
NPLOC4-211ENST00000573212 PALD1Q9ULE6 856 aa9.95□□□□□ -0.82
NPLOC4-211ENST00000573212 ZBTB21Q9ULJ3 1066 aa9.95□□□□□ -0.82
NPLOC4-211ENST00000573212 LOC285556D6RIA3 1793 aa9.95□□□□□ -0.82
NPLOC4-211ENST00000573212 MYH13Q9UKX3 1938 aa9.94□□□□□ -0.82
NPLOC4-211ENST00000573212 FLT1P17948 1338 aa9.94□□□□□ -0.82
NPLOC4-211ENST00000573212 PNMA6EA0A0J9YXQ4 647 aa9.94□□□□□ -0.82
NPLOC4-211ENST00000573212 USP17L15C9J2P7 530 aa9.94□□□□□ -0.82
NPLOC4-211ENST00000573212 USP17L13C9JLJ4 530 aa9.94□□□□□ -0.82
NPLOC4-211ENST00000573212 USP17L11C9JVI0 530 aa9.94□□□□□ -0.82
NPLOC4-211ENST00000573212 USP17L18D6R9N7 530 aa9.94□□□□□ -0.82
NPLOC4-211ENST00000573212 USP17L22D6RA61 530 aa9.94□□□□□ -0.82
NPLOC4-211ENST00000573212 USP17L17D6RBQ6 530 aa9.94□□□□□ -0.82
NPLOC4-211ENST00000573212 USP17L19D6RCP7 530 aa9.94□□□□□ -0.82
NPLOC4-211ENST00000573212 USP17L20D6RJB6 530 aa9.94□□□□□ -0.82
NPLOC4-211ENST00000573212 GDF11O95390 407 aa9.94□□□□□ -0.82
NPLOC4-211ENST00000573212 USP17L24Q0WX57 530 aa9.94□□□□□ -0.82
NPLOC4-211ENST00000573212 G3BP1Q13283 466 aaKnown RBP eCLIP9.94□□□□□ -0.82
NPLOC4-211ENST00000573212 TATDN1Q6P1N9 297 aa9.94□□□□□ -0.82
NPLOC4-211ENST00000573212 LBX2Q6XYB7 198 aa9.94□□□□□ -0.82
NPLOC4-211ENST00000573212 CATSPERGQ6ZRH7 1159 aa9.94□□□□□ -0.82
NPLOC4-211ENST00000573212 APBA2Q99767 749 aa9.94□□□□□ -0.82
NPLOC4-211ENST00000573212 PAGR1Q9BTK6 254 aa9.94□□□□□ -0.82
NPLOC4-211ENST00000573212 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.94□□□□□ -0.82
NPLOC4-211ENST00000573212 SENP6Q9GZR1 1112 aaPredicted RBP9.94□□□□□ -0.82
NPLOC4-211ENST00000573212 SNRKQ9NRH2 765 aa9.94□□□□□ -0.82
NPLOC4-211ENST00000573212 PCDHGA10Q9Y5H3 936 aa9.94□□□□□ -0.82
NPLOC4-211ENST00000573212 CUL9Q8IWT3 2517 aa9.94□□□□□ -0.82
NPLOC4-211ENST00000573212 SLC15A5A6NIM6 579 aa9.93□□□□□ -0.82
NPLOC4-211ENST00000573212 GNAI2P04899 355 aa9.93□□□□□ -0.82
NPLOC4-211ENST00000573212 DYNLL1P63167 89 aaKnown RBP9.93□□□□□ -0.82
NPLOC4-211ENST00000573212 TSR1Q2NL82 804 aaKnown RBP9.93□□□□□ -0.82
NPLOC4-211ENST00000573212 METTL3Q86U44 580 aaKnown RBP9.93□□□□□ -0.82
NPLOC4-211ENST00000573212 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.93□□□□□ -0.82
NPLOC4-211ENST00000573212 NPLOC4Q8TAT6 608 aa9.93□□□□□ -0.82
NPLOC4-211ENST00000573212 LPAR1Q92633 364 aa9.93□□□□□ -0.82
NPLOC4-211ENST00000573212 POM121Q96HA1 1249 aa9.93□□□□□ -0.82
NPLOC4-211ENST00000573212 NOL10Q9BSC4 688 aaKnown RBP9.93□□□□□ -0.82
NPLOC4-211ENST00000573212 BTBD7Q9P203 1132 aa9.93□□□□□ -0.82
NPLOC4-211ENST00000573212 DDX20Q9UHI6 824 aaKnown RBP9.93□□□□□ -0.82
NPLOC4-211ENST00000573212 MSCO60682 206 aa9.92□□□□□ -0.82
NPLOC4-211ENST00000573212 GLRX3O76003 335 aaKnown RBP9.92□□□□□ -0.82
NPLOC4-211ENST00000573212 GH2P01242 217 aa9.92□□□□□ -0.82
NPLOC4-211ENST00000573212 CCNA1P78396 465 aa9.92□□□□□ -0.82
NPLOC4-211ENST00000573212 GRB14Q14449 540 aa9.92□□□□□ -0.82
NPLOC4-211ENST00000573212 TNNI3KQ59H18 835 aa9.92□□□□□ -0.82
NPLOC4-211ENST00000573212 MFSD14CQ5VZR4 134 aa9.92□□□□□ -0.82
NPLOC4-211ENST00000573212 CCAR1Q8IX12 1150 aaKnown RBP9.92□□□□□ -0.82
NPLOC4-211ENST00000573212 CRACR2BQ8N4Y2 399 aaPredicted RBP9.92□□□□□ -0.82
NPLOC4-211ENST00000573212 TRPV1Q8NER1 839 aa9.92□□□□□ -0.82
NPLOC4-211ENST00000573212 DBNDD2Q9BQY9 259 aa9.92□□□□□ -0.82
NPLOC4-211ENST00000573212 KIAA1683Q9H0B3 1180 aa9.92□□□□□ -0.82
NPLOC4-211ENST00000573212 FPGT-TNNI3KV9GXZ4 949 aa9.92□□□□□ -0.82
NPLOC4-211ENST00000573212 DDX60LQ5H9U9 1706 aaKnown RBP9.92□□□□□ -0.82
NPLOC4-211ENST00000573212 DNM1LO00429 736 aa9.91□□□□□ -0.82
NPLOC4-211ENST00000573212 HLA-DOAP06340 250 aa9.91□□□□□ -0.82
NPLOC4-211ENST00000573212 CYP2C19P33261 490 aa9.91□□□□□ -0.82
NPLOC4-211ENST00000573212 ZAP70P43403 619 aa9.91□□□□□ -0.82
NPLOC4-211ENST00000573212 USP14P54578 494 aa9.91□□□□□ -0.82
NPLOC4-211ENST00000573212 CCDC158Q5M9N0 1113 aa9.91□□□□□ -0.82
NPLOC4-211ENST00000573212 TTC39AQ5SRH9 613 aa9.91□□□□□ -0.82
NPLOC4-211ENST00000573212 MYSM1Q5VVJ2 828 aa9.91□□□□□ -0.82
NPLOC4-211ENST00000573212 TYW1BQ6NUM6 668 aa9.91□□□□□ -0.82
NPLOC4-211ENST00000573212 ACER1Q8TDN7 264 aa9.91□□□□□ -0.82
NPLOC4-211ENST00000573212 SSH3Q8TE77 659 aa9.91□□□□□ -0.82
NPLOC4-211ENST00000573212 EHD4Q9H223 541 aa9.91□□□□□ -0.82
NPLOC4-211ENST00000573212 SEMA6BQ9H3T3 888 aa9.91□□□□□ -0.82
NPLOC4-211ENST00000573212 PIH1D3Q9NQM4 214 aaKnown RBP9.91□□□□□ -0.82
NPLOC4-211ENST00000573212 SAP30BPQ9UHR5 308 aaKnown RBP9.91□□□□□ -0.82
NPLOC4-211ENST00000573212 TNNQ9UQP3 1299 aa9.91□□□□□ -0.82
NPLOC4-211ENST00000573212 NDUFB9Q9Y6M9 179 aa9.91□□□□□ -0.82
NPLOC4-211ENST00000573212 OATP04181 439 aa9.9□□□□□ -0.82
NPLOC4-211ENST00000573212 CYBAP13498 195 aa9.9□□□□□ -0.82
NPLOC4-211ENST00000573212 TRIM27P14373 513 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms