RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 DCAF15Q66K64 600 aa11.41□□□□□ -0.58
NPLOC4-210ENST00000572824 GPAT2Q6NUI2 795 aa11.41□□□□□ -0.58
NPLOC4-210ENST00000572824 ADGRA1Q86SQ6 560 aa11.41□□□□□ -0.58
NPLOC4-210ENST00000572824 DZIP1Q86YF9 867 aaKnown RBP11.41□□□□□ -0.58
NPLOC4-210ENST00000572824 ARMC5Q96C12 935 aa11.41□□□□□ -0.58
NPLOC4-210ENST00000572824 ZNF333Q96JL9 665 aa11.41□□□□□ -0.58
NPLOC4-210ENST00000572824 TRIM47Q96LD4 638 aa11.41□□□□□ -0.58
NPLOC4-210ENST00000572824 ZFYVE28Q9HCC9 887 aa11.41□□□□□ -0.58
NPLOC4-210ENST00000572824 KCNH4Q9UQ05 1017 aa11.41□□□□□ -0.58
NPLOC4-210ENST00000572824 MYH1P12882 1939 aa11.41□□□□□ -0.58
NPLOC4-210ENST00000572824 TRIOBPQ9H2D6 2365 aa11.4□□□□□ -0.58
NPLOC4-210ENST00000572824 PLXNB2O15031 1838 aa11.4□□□□□ -0.58
NPLOC4-210ENST00000572824 PDHXO00330 501 aa11.4□□□□□ -0.58
NPLOC4-210ENST00000572824 HNRNPUQ00839 825 aaKnown RBP eCLIP11.4□□□□□ -0.58
NPLOC4-210ENST00000572824 MTFR1Q15390 333 aa11.4□□□□□ -0.58
NPLOC4-210ENST00000572824 SLC4A8Q2Y0W8 1093 aa11.4□□□□□ -0.58
NPLOC4-210ENST00000572824 NOL9Q5SY16 702 aaKnown RBP11.4□□□□□ -0.58
NPLOC4-210ENST00000572824 OTUD7BQ6GQQ9 843 aa11.4□□□□□ -0.58
NPLOC4-210ENST00000572824 C17orf99Q6UX52 265 aa11.4□□□□□ -0.58
NPLOC4-210ENST00000572824 ARHGAP45Q92619 1136 aa11.4□□□□□ -0.58
NPLOC4-210ENST00000572824 DBNDD2Q9BQY9 259 aa11.4□□□□□ -0.58
NPLOC4-210ENST00000572824 IDI2Q9BXS1 227 aa11.4□□□□□ -0.58
NPLOC4-210ENST00000572824 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.4□□□□□ -0.58
NPLOC4-210ENST00000572824 GNL3LQ9NVN8 582 aaKnown RBP11.4□□□□□ -0.58
NPLOC4-210ENST00000572824 DDX60LQ5H9U9 1706 aaKnown RBP11.4□□□□□ -0.58
NPLOC4-210ENST00000572824 TRAK2O60296 914 aa11.39□□□□□ -0.59
NPLOC4-210ENST00000572824 PEX10O60683 326 aa11.39□□□□□ -0.59
NPLOC4-210ENST00000572824 GNAI2P04899 355 aa11.39□□□□□ -0.59
NPLOC4-210ENST00000572824 GNAI3P08754 354 aa11.39□□□□□ -0.59
NPLOC4-210ENST00000572824 ARID4AP29374 1257 aaPredicted RBP11.39□□□□□ -0.59
NPLOC4-210ENST00000572824 JAG1P78504 1218 aa11.39□□□□□ -0.59
NPLOC4-210ENST00000572824 PPATQ06203 517 aa11.39□□□□□ -0.59
NPLOC4-210ENST00000572824 IRF5Q13568 498 aa11.39□□□□□ -0.59
NPLOC4-210ENST00000572824 ANKLE1Q8NAG6 615 aa11.39□□□□□ -0.59
NPLOC4-210ENST00000572824 SPATA5Q8NB90 893 aa11.39□□□□□ -0.59
NPLOC4-210ENST00000572824 NSUN4Q96CB9 384 aaKnown RBP11.39□□□□□ -0.59
NPLOC4-210ENST00000572824 SHISA4Q96DD7 197 aa11.39□□□□□ -0.59
NPLOC4-210ENST00000572824 FKBPLQ9UIM3 349 aa11.39□□□□□ -0.59
NPLOC4-210ENST00000572824 PTPRAP18433 802 aa11.38□□□□□ -0.59
NPLOC4-210ENST00000572824 SLC9C1Q4G0N8 1177 aa11.38□□□□□ -0.59
NPLOC4-210ENST00000572824 TREML2Q5T2D2 321 aa11.38□□□□□ -0.59
NPLOC4-210ENST00000572824 ANKRD23Q86SG2 305 aa11.38□□□□□ -0.59
NPLOC4-210ENST00000572824 ZSCAN29Q8IWY8 852 aaPredicted RBP11.38□□□□□ -0.59
NPLOC4-210ENST00000572824 PNMA1Q8ND90 353 aa11.38□□□□□ -0.59
NPLOC4-210ENST00000572824 SH3RF3Q8TEJ3 882 aaPredicted RBP11.38□□□□□ -0.59
NPLOC4-210ENST00000572824 UNC93B1Q9H1C4 597 aa11.38□□□□□ -0.59
NPLOC4-210ENST00000572824 GABRQQ9UN88 632 aa11.38□□□□□ -0.59
NPLOC4-210ENST00000572824 ZHX2Q9Y6X8 837 aa11.38□□□□□ -0.59
NPLOC4-210ENST00000572824 NAV1Q8NEY1 1877 aa11.38□□□□□ -0.59
NPLOC4-210ENST00000572824 PDS5AQ29RF7 1337 aaKnown RBP11.37□□□□□ -0.59
NPLOC4-210ENST00000572824 GPR75-ASB3A0A0A6YYF3 556 aa11.37□□□□□ -0.59
NPLOC4-210ENST00000572824 A0A0G2JLL6 359 aaPredicted RBP11.37□□□□□ -0.59
NPLOC4-210ENST00000572824 TRIM75PA6NK02 468 aa11.37□□□□□ -0.59
NPLOC4-210ENST00000572824 ENTPD3O75355 529 aa11.37□□□□□ -0.59
NPLOC4-210ENST00000572824 BCRP11274 1271 aa11.37□□□□□ -0.59
NPLOC4-210ENST00000572824 PSMC4P43686 418 aa11.37□□□□□ -0.59
NPLOC4-210ENST00000572824 MVPQ14764 893 aaKnown RBP11.37□□□□□ -0.59
NPLOC4-210ENST00000572824 TNNI3KQ59H18 835 aa11.37□□□□□ -0.59
NPLOC4-210ENST00000572824 ZKSCAN2Q63HK3 967 aa11.37□□□□□ -0.59
NPLOC4-210ENST00000572824 GADL1Q6ZQY3 521 aa11.37□□□□□ -0.59
NPLOC4-210ENST00000572824 PRRT2Q7Z6L0 340 aaPredicted RBP11.37□□□□□ -0.59
NPLOC4-210ENST00000572824 SCYL3Q8IZE3 742 aa11.37□□□□□ -0.59
NPLOC4-210ENST00000572824 PANK1Q8TE04 598 aa11.37□□□□□ -0.59
NPLOC4-210ENST00000572824 DNAJC18Q9H819 358 aa11.37□□□□□ -0.59
NPLOC4-210ENST00000572824 PIH1D3Q9NQM4 214 aaKnown RBP11.37□□□□□ -0.59
NPLOC4-210ENST00000572824 PLA2G2EQ9NZK7 142 aa11.37□□□□□ -0.59
NPLOC4-210ENST00000572824 RAI14Q9P0K7 980 aa11.37□□□□□ -0.59
NPLOC4-210ENST00000572824 AFG3L2Q9Y4W6 797 aa11.37□□□□□ -0.59
NPLOC4-210ENST00000572824 FPGT-TNNI3KV9GXZ4 949 aa11.37□□□□□ -0.59
NPLOC4-210ENST00000572824 DYNLL1P63167 89 aaKnown RBP11.36□□□□□ -0.59
NPLOC4-210ENST00000572824 PRKCZQ05513 592 aa11.36□□□□□ -0.59
NPLOC4-210ENST00000572824 PLA2G2CQ5R387 149 aa11.36□□□□□ -0.59
NPLOC4-210ENST00000572824 ITPRIPQ8IWB1 547 aa11.36□□□□□ -0.59
NPLOC4-210ENST00000572824 ARMC2Q8NEN0 867 aa11.36□□□□□ -0.59
NPLOC4-210ENST00000572824 CCDC8Q9H0W5 538 aaPredicted RBP11.36□□□□□ -0.59
NPLOC4-210ENST00000572824 OSBPL5Q9H0X9 879 aaPredicted RBP11.36□□□□□ -0.59
NPLOC4-210ENST00000572824 AATFQ9NY61 560 aaKnown RBP eCLIP11.36□□□□□ -0.59
NPLOC4-210ENST00000572824 DBNLQ9UJU6 430 aaKnown RBP11.36□□□□□ -0.59
NPLOC4-210ENST00000572824 SZT2Q5T011 3432 aa11.36□□□□□ -0.59
NPLOC4-210ENST00000572824 RANBP2P49792 3224 aaKnown RBP11.35□□□□□ -0.59
NPLOC4-210ENST00000572824 CYP2E1P05181 493 aaPredicted RBP11.35□□□□□ -0.59
NPLOC4-210ENST00000572824 ZAP70P43403 619 aa11.35□□□□□ -0.59
NPLOC4-210ENST00000572824 MAP3K10Q02779 954 aa11.35□□□□□ -0.59
NPLOC4-210ENST00000572824 G3BP1Q13283 466 aaKnown RBP eCLIP11.35□□□□□ -0.59
NPLOC4-210ENST00000572824 GORABQ5T7V8 394 aa11.35□□□□□ -0.59
NPLOC4-210ENST00000572824 MAPKAPK5Q8IW41 473 aa11.35□□□□□ -0.59
NPLOC4-210ENST00000572824 SSH3Q8TE77 659 aa11.35□□□□□ -0.59
NPLOC4-210ENST00000572824 SRRDQ9UH36 339 aa11.35□□□□□ -0.59
NPLOC4-210ENST00000572824 AKAP2Q9Y2D5 859 aa11.35□□□□□ -0.59
NPLOC4-210ENST00000572824 MYPNQ86TC9 1320 aa11.35□□□□□ -0.59
NPLOC4-210ENST00000572824 ELNP15502 786 aa11.34□□□□□ -0.59
NPLOC4-210ENST00000572824 ATP8B2P98198 1209 aa11.34□□□□□ -0.59
NPLOC4-210ENST00000572824 TEX11Q8IYF3 940 aa11.34□□□□□ -0.59
NPLOC4-210ENST00000572824 ZGPATQ8N5A5 531 aaKnown RBP11.34□□□□□ -0.59
NPLOC4-210ENST00000572824 EAF2Q96CJ1 260 aaPredicted RBP11.34□□□□□ -0.59
NPLOC4-210ENST00000572824 HOOK2Q96ED9 719 aa11.34□□□□□ -0.59
NPLOC4-210ENST00000572824 ANTXR1Q9H6X2 564 aa11.34□□□□□ -0.59
NPLOC4-210ENST00000572824 SAP30BPQ9UHR5 308 aaKnown RBP11.34□□□□□ -0.59
NPLOC4-210ENST00000572824 EXOC6BQ9Y2D4 811 aa11.34□□□□□ -0.59
NPLOC4-210ENST00000572824 BAZ2AQ9UIF9 1905 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms