RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 ANO1Q5XXA6 986 aa10.63□□□□□ -0.71
SMG1-216ENST00000569122 MFSD5Q6N075 450 aa10.63□□□□□ -0.71
SMG1-216ENST00000569122 PSRC1Q6PGN9 363 aaPredicted RBP10.63□□□□□ -0.71
SMG1-216ENST00000569122 TBC1D9Q6ZT07 1266 aa10.63□□□□□ -0.71
SMG1-216ENST00000569122 TTC6Q86TZ1 520 aa10.63□□□□□ -0.71
SMG1-216ENST00000569122 TMEM199Q8N511 208 aa10.63□□□□□ -0.71
SMG1-216ENST00000569122 MOV10L1Q9BXT6 1211 aaKnown RBP10.63□□□□□ -0.71
SMG1-216ENST00000569122 SPATC1LQ9H0A9 340 aa10.63□□□□□ -0.71
SMG1-216ENST00000569122 PRDM12Q9H4Q4 367 aa10.63□□□□□ -0.71
SMG1-216ENST00000569122 RPAP3Q9H6T3 665 aaPredicted RBP10.63□□□□□ -0.71
SMG1-216ENST00000569122 DNAJC18Q9H819 358 aa10.63□□□□□ -0.71
SMG1-216ENST00000569122 PALD1Q9ULE6 856 aa10.63□□□□□ -0.71
SMG1-216ENST00000569122 A0A1W2PQ45 241 aaPredicted RBP10.62□□□□□ -0.71
SMG1-216ENST00000569122 A0A1W2PQY0 241 aa10.62□□□□□ -0.71
SMG1-216ENST00000569122 MOXD2PA6NHM9 499 aa10.62□□□□□ -0.71
SMG1-216ENST00000569122 SLC25A27O95847 323 aa10.62□□□□□ -0.71
SMG1-216ENST00000569122 FCER1AP12319 257 aa10.62□□□□□ -0.71
SMG1-216ENST00000569122 ERCC3P19447 782 aa10.62□□□□□ -0.71
SMG1-216ENST00000569122 ITGB8P26012 769 aa10.62□□□□□ -0.71
SMG1-216ENST00000569122 JAG1P78504 1218 aa10.62□□□□□ -0.71
SMG1-216ENST00000569122 TFCP2Q12800 502 aa10.62□□□□□ -0.71
SMG1-216ENST00000569122 ABCB5Q2M3G0 1257 aa10.62□□□□□ -0.71
SMG1-216ENST00000569122 FAM47AQ5JRC9 791 aa10.62□□□□□ -0.71
SMG1-216ENST00000569122 TATDN1Q6P1N9 297 aa10.62□□□□□ -0.71
SMG1-216ENST00000569122 PBX4Q9BYU1 374 aa10.62□□□□□ -0.71
SMG1-216ENST00000569122 SLC28A3Q9HAS3 691 aa10.62□□□□□ -0.71
SMG1-216ENST00000569122 STARD7Q9NQZ5 370 aa10.62□□□□□ -0.71
SMG1-216ENST00000569122 SERPINB13Q9UIV8 391 aa10.62□□□□□ -0.71
SMG1-216ENST00000569122 PA2G4Q9UQ80 394 aaKnown RBP10.62□□□□□ -0.71
SMG1-216ENST00000569122 PLXNB2O15031 1838 aa10.61□□□□□ -0.71
SMG1-216ENST00000569122 COBLO75128 1261 aa10.61□□□□□ -0.71
SMG1-216ENST00000569122 AKR1A1P14550 325 aa10.61□□□□□ -0.71
SMG1-216ENST00000569122 FAAP100Q0VG06 881 aa10.61□□□□□ -0.71
SMG1-216ENST00000569122 CCDC85BQ15834 202 aaPredicted RBP10.61□□□□□ -0.71
SMG1-216ENST00000569122 ALDH1L2Q3SY69 923 aa10.61□□□□□ -0.71
SMG1-216ENST00000569122 TMEM31Q5JXX7 168 aa10.61□□□□□ -0.71
SMG1-216ENST00000569122 TMED8Q6PL24 325 aaPredicted RBP10.61□□□□□ -0.71
SMG1-216ENST00000569122 NCAPG2Q86XI2 1143 aa10.61□□□□□ -0.71
SMG1-216ENST00000569122 HERVK_113Q902F9 699 aa10.61□□□□□ -0.71
SMG1-216ENST00000569122 MAML3Q96JK9 1138 aa10.61□□□□□ -0.71
SMG1-216ENST00000569122 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.61□□□□□ -0.71
SMG1-216ENST00000569122 EHD4Q9H223 541 aa10.61□□□□□ -0.71
SMG1-216ENST00000569122 MRS2Q9HD23 443 aa10.61□□□□□ -0.71
SMG1-216ENST00000569122 DIS3Q9Y2L1 958 aaKnown RBP10.61□□□□□ -0.71
SMG1-216ENST00000569122 ELP1O95163 1332 aa10.6□□□□□ -0.71
SMG1-216ENST00000569122 MAST2Q6P0Q8 1798 aa10.6□□□□□ -0.71
SMG1-216ENST00000569122 BMP1P13497 986 aa10.6□□□□□ -0.71
SMG1-216ENST00000569122 COPB2P35606 906 aa10.6□□□□□ -0.71
SMG1-216ENST00000569122 USP5P45974 858 aa10.6□□□□□ -0.71
SMG1-216ENST00000569122 CCDC158Q5M9N0 1113 aa10.6□□□□□ -0.71
SMG1-216ENST00000569122 TMEM240Q5SV17 173 aa10.6□□□□□ -0.71
SMG1-216ENST00000569122 PRAMEF19Q5SWL8 479 aa10.6□□□□□ -0.71
SMG1-216ENST00000569122 RASIP1Q5U651 963 aa10.6□□□□□ -0.71
SMG1-216ENST00000569122 SSH1Q8WYL5 1049 aa10.6□□□□□ -0.71
SMG1-216ENST00000569122 GLT1D1Q96MS3 346 aa10.6□□□□□ -0.71
SMG1-216ENST00000569122 SPC25Q9HBM1 224 aa10.6□□□□□ -0.71
SMG1-216ENST00000569122 SAP30BPQ9UHR5 308 aaKnown RBP10.6□□□□□ -0.71
SMG1-216ENST00000569122 CNPY2Q9Y2B0 182 aa10.6□□□□□ -0.71
SMG1-216ENST00000569122 MYH2Q9UKX2 1941 aa10.59□□□□□ -0.71
SMG1-216ENST00000569122 TLR3O15455 904 aaKnown RBP10.59□□□□□ -0.71
SMG1-216ENST00000569122 SRGAP3O43295 1099 aa10.59□□□□□ -0.71
SMG1-216ENST00000569122 PGK1P00558 417 aa10.59□□□□□ -0.71
SMG1-216ENST00000569122 GNAI3P08754 354 aa10.59□□□□□ -0.71
SMG1-216ENST00000569122 MCAMP43121 646 aa10.59□□□□□ -0.71
SMG1-216ENST00000569122 ACLYP53396 1101 aa10.59□□□□□ -0.71
SMG1-216ENST00000569122 G3BP1Q13283 466 aaKnown RBP eCLIP10.59□□□□□ -0.71
SMG1-216ENST00000569122 PLS1Q14651 629 aa10.59□□□□□ -0.71
SMG1-216ENST00000569122 MSL3Q8N5Y2 521 aaKnown RBP10.59□□□□□ -0.71
SMG1-216ENST00000569122 PCSK9Q8NBP7 692 aaKnown RBP10.59□□□□□ -0.71
SMG1-216ENST00000569122 TINF2Q9BSI4 451 aa10.59□□□□□ -0.71
SMG1-216ENST00000569122 LRFN3Q9BTN0 628 aa10.59□□□□□ -0.71
SMG1-216ENST00000569122 API5Q9BZZ5 524 aaKnown RBP10.59□□□□□ -0.71
SMG1-216ENST00000569122 TANGO6Q9C0B7 1094 aa10.59□□□□□ -0.71
SMG1-216ENST00000569122 SH2D4AQ9H788 454 aa10.59□□□□□ -0.71
SMG1-216ENST00000569122 COG5Q9UP83 839 aa10.59□□□□□ -0.71
SMG1-216ENST00000569122 ZNF521Q96K83 1311 aa10.58□□□□□ -0.71
SMG1-216ENST00000569122 ROBO3Q96MS0 1386 aa10.58□□□□□ -0.72
SMG1-216ENST00000569122 E9PSI1 815 aa10.58□□□□□ -0.72
SMG1-216ENST00000569122 APBB1O00213 710 aa10.58□□□□□ -0.72
SMG1-216ENST00000569122 ERC2O15083 957 aa10.58□□□□□ -0.72
SMG1-216ENST00000569122 GTPBP6O43824 516 aaPredicted RBP10.58□□□□□ -0.72
SMG1-216ENST00000569122 PBX2P40425 430 aa10.58□□□□□ -0.72
SMG1-216ENST00000569122 ADGRE1Q14246 886 aa10.58□□□□□ -0.72
SMG1-216ENST00000569122 KCTD2Q14681 263 aa10.58□□□□□ -0.72
SMG1-216ENST00000569122 SKIV2LQ15477 1246 aaKnown RBP10.58□□□□□ -0.72
SMG1-216ENST00000569122 SHROOM1Q2M3G4 852 aaPredicted RBP10.58□□□□□ -0.72
SMG1-216ENST00000569122 CCDC184Q52MB2 194 aa10.58□□□□□ -0.72
SMG1-216ENST00000569122 TTC39AQ5SRH9 613 aa10.58□□□□□ -0.72
SMG1-216ENST00000569122 PI16Q6UXB8 463 aa10.58□□□□□ -0.72
SMG1-216ENST00000569122 ACER1Q8TDN7 264 aa10.58□□□□□ -0.72
SMG1-216ENST00000569122 VTI1AQ96AJ9 217 aa10.58□□□□□ -0.72
SMG1-216ENST00000569122 MMP19Q99542 508 aa10.58□□□□□ -0.72
SMG1-216ENST00000569122 TBX21Q9UL17 535 aa10.58□□□□□ -0.72
SMG1-216ENST00000569122 FAM184BQ9ULE4 1060 aa10.58□□□□□ -0.72
SMG1-216ENST00000569122 LTBP2Q14767 1821 aa10.57□□□□□ -0.72
SMG1-216ENST00000569122 GPR37L1O60883 481 aa10.57□□□□□ -0.72
SMG1-216ENST00000569122 FGBP02675 491 aa10.57□□□□□ -0.72
SMG1-216ENST00000569122 DSG3P32926 999 aa10.57□□□□□ -0.72
SMG1-216ENST00000569122 MTX1Q13505 466 aa10.57□□□□□ -0.72
SMG1-216ENST00000569122 ZNF365Q70YC5 407 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms