RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 PCDHB15Q9Y5E8 787 aa18.23■□□□□ 0.51
CMTM3-212ENST00000566121 SLC4A4Q9Y6R1 1079 aa18.23■□□□□ 0.51
CMTM3-212ENST00000566121 H0YGN5 161 aa18.22■□□□□ 0.51
CMTM3-212ENST00000566121 ERC2O15083 957 aa18.22■□□□□ 0.51
CMTM3-212ENST00000566121 RNF113AO15541 343 aaKnown RBP18.22■□□□□ 0.51
CMTM3-212ENST00000566121 CYP2D6P10635 497 aa18.22■□□□□ 0.51
CMTM3-212ENST00000566121 CYP2B6P20813 491 aa18.22■□□□□ 0.51
CMTM3-212ENST00000566121 GRB14Q14449 540 aa18.22■□□□□ 0.51
CMTM3-212ENST00000566121 NECAB2Q7Z6G3 386 aa18.22■□□□□ 0.51
CMTM3-212ENST00000566121 ABRAQ8N0Z2 381 aa18.22■□□□□ 0.51
CMTM3-212ENST00000566121 PRO3102Q9H379 93 aa18.22■□□□□ 0.51
CMTM3-212ENST00000566121 BTBD7Q9P203 1132 aa18.22■□□□□ 0.51
CMTM3-212ENST00000566121 SYNPO2Q9UMS6 1093 aa18.22■□□□□ 0.51
CMTM3-212ENST00000566121 ADAMTS5Q9UNA0 930 aa18.22■□□□□ 0.51
CMTM3-212ENST00000566121 MYH7P12883 1935 aa18.21■□□□□ 0.51
CMTM3-212ENST00000566121 GSG1L2A8MUP6 293 aa18.21■□□□□ 0.51
CMTM3-212ENST00000566121 MPHOSPH10O00566 681 aaKnown RBP18.21■□□□□ 0.51
CMTM3-212ENST00000566121 WDR46O15213 610 aaKnown RBP18.21■□□□□ 0.51
CMTM3-212ENST00000566121 AKR1B1P15121 316 aa18.21■□□□□ 0.51
CMTM3-212ENST00000566121 ZKSCAN1P17029 563 aaPredicted RBP18.21■□□□□ 0.51
CMTM3-212ENST00000566121 DSG3P32926 999 aa18.21■□□□□ 0.51
CMTM3-212ENST00000566121 EVX2Q03828 476 aa18.21■□□□□ 0.51
CMTM3-212ENST00000566121 SLC44A5Q8NCS7 719 aa18.21■□□□□ 0.51
CMTM3-212ENST00000566121 DPF3Q92784 378 aa18.21■□□□□ 0.51
CMTM3-212ENST00000566121 DYNLL2Q96FJ2 89 aa18.21■□□□□ 0.51
CMTM3-212ENST00000566121 PAGR1Q9BTK6 254 aa18.21■□□□□ 0.51
CMTM3-212ENST00000566121 ROBO3Q96MS0 1386 aa18.2■□□□□ 0.5
CMTM3-212ENST00000566121 MNX1P50219 401 aaPredicted RBP18.2■□□□□ 0.5
CMTM3-212ENST00000566121 ICA1Q05084 483 aa18.2■□□□□ 0.5
CMTM3-212ENST00000566121 ZYXQ15942 572 aaKnown RBP18.2■□□□□ 0.5
CMTM3-212ENST00000566121 SLFNL1Q499Z3 407 aa18.2■□□□□ 0.5
CMTM3-212ENST00000566121 OSBP2Q969R2 916 aa18.2■□□□□ 0.5
CMTM3-212ENST00000566121 NBPF3Q9H094 633 aa18.2■□□□□ 0.5
CMTM3-212ENST00000566121 MROH8Q9H579 483 aa18.2■□□□□ 0.5
CMTM3-212ENST00000566121 A0A1W2PPC1 479 aa18.19■□□□□ 0.5
CMTM3-212ENST00000566121 PEX10O60683 326 aa18.19■□□□□ 0.5
CMTM3-212ENST00000566121 CHGBP05060 677 aa18.19■□□□□ 0.5
CMTM3-212ENST00000566121 PRKAR2AP13861 404 aaKnown RBP18.19■□□□□ 0.5
CMTM3-212ENST00000566121 RRP1P56182 461 aaKnown RBP18.19■□□□□ 0.5
CMTM3-212ENST00000566121 CACNB2Q08289 660 aaPredicted RBP18.19■□□□□ 0.5
CMTM3-212ENST00000566121 LHX8Q68G74 356 aa18.19■□□□□ 0.5
CMTM3-212ENST00000566121 PI4K2BQ8TCG2 481 aa18.19■□□□□ 0.5
CMTM3-212ENST00000566121 SPATC1LQ9H0A9 340 aa18.19■□□□□ 0.5
CMTM3-212ENST00000566121 ZNF287Q9HBT7 754 aa18.19■□□□□ 0.5
CMTM3-212ENST00000566121 RLFQ13129 1914 aa18.19■□□□□ 0.5
CMTM3-212ENST00000566121 PATL2C9JE40 543 aaKnown RBP18.18■□□□□ 0.5
CMTM3-212ENST00000566121 MSCO60682 206 aa18.18■□□□□ 0.5
CMTM3-212ENST00000566121 TRIM32Q13049 653 aa18.18■□□□□ 0.5
CMTM3-212ENST00000566121 HDAC1Q13547 482 aaPredicted RBP18.18■□□□□ 0.5
CMTM3-212ENST00000566121 KIAA1755Q5JYT7 1200 aa18.18■□□□□ 0.5
CMTM3-212ENST00000566121 OLFML2BQ68BL8 750 aa18.18■□□□□ 0.5
CMTM3-212ENST00000566121 MKL1Q969V6 931 aa18.18■□□□□ 0.5
CMTM3-212ENST00000566121 PAWRQ96IZ0 340 aaKnown RBP18.18■□□□□ 0.5
CMTM3-212ENST00000566121 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.18■□□□□ 0.5
CMTM3-212ENST00000566121 NYAP2Q9P242 653 aa18.18■□□□□ 0.5
CMTM3-212ENST00000566121 COLQQ9Y215 455 aaPredicted RBP18.18■□□□□ 0.5
CMTM3-212ENST00000566121 IVNS1ABPQ9Y6Y0 642 aa18.18■□□□□ 0.5
CMTM3-212ENST00000566121 SALL3Q9BXA9 1300 aa18.18■□□□□ 0.5
CMTM3-212ENST00000566121 SZT2Q5T011 3432 aa18.17■□□□□ 0.5
CMTM3-212ENST00000566121 SLC25A27O95847 323 aa18.17■□□□□ 0.5
CMTM3-212ENST00000566121 COL6A1P12109 1028 aa18.17■□□□□ 0.5
CMTM3-212ENST00000566121 MFSD14CQ5VZR4 134 aa18.17■□□□□ 0.5
CMTM3-212ENST00000566121 MOV10L1Q9BXT6 1211 aaKnown RBP18.17■□□□□ 0.5
CMTM3-212ENST00000566121 SLC5A4Q9NY91 659 aa18.17■□□□□ 0.5
CMTM3-212ENST00000566121 STAP2Q9UGK3 403 aa18.17■□□□□ 0.5
CMTM3-212ENST00000566121 BAZ2AQ9UIF9 1905 aaKnown RBP18.17■□□□□ 0.5
CMTM3-212ENST00000566121 CYP2D7A0A087X1C5 515 aa18.16■□□□□ 0.5
CMTM3-212ENST00000566121 GPAA1O43292 621 aa18.16■□□□□ 0.5
CMTM3-212ENST00000566121 EEF2P13639 858 aaKnown RBP18.16■□□□□ 0.5
CMTM3-212ENST00000566121 COPB2P35606 906 aa18.16■□□□□ 0.5
CMTM3-212ENST00000566121 GOPCQ9HD26 462 aa18.16■□□□□ 0.5
CMTM3-212ENST00000566121 NRBP1Q9UHY1 535 aa18.16■□□□□ 0.5
CMTM3-212ENST00000566121 ZNF236Q9UL36 1845 aa18.15■□□□□ 0.5
CMTM3-212ENST00000566121 IGKV6D-41A0A0C4DH26 115 aa18.15■□□□□ 0.5
CMTM3-212ENST00000566121 EVI5O60447 810 aa18.15■□□□□ 0.5
CMTM3-212ENST00000566121 RASA1P20936 1047 aa18.15■□□□□ 0.5
CMTM3-212ENST00000566121 FXR1P51114 621 aaKnown RBP eCLIP18.15■□□□□ 0.5
CMTM3-212ENST00000566121 CCL14Q16627 93 aa18.15■□□□□ 0.5
CMTM3-212ENST00000566121 ZMYM1Q5SVZ6 1142 aa18.15■□□□□ 0.5
CMTM3-212ENST00000566121 TANGO6Q9C0B7 1094 aa18.15■□□□□ 0.5
CMTM3-212ENST00000566121 CWC22Q9HCG8 908 aaKnown RBP18.15■□□□□ 0.5
CMTM3-212ENST00000566121 A0A0G2JMZ2 1700 aa18.15■□□□□ 0.5
CMTM3-212ENST00000566121 MYH8P13535 1937 aa18.14■□□□□ 0.49
CMTM3-212ENST00000566121 GREB1LQ9C091 1923 aaPredicted RBP18.14■□□□□ 0.49
CMTM3-212ENST00000566121 SMIM22K7EJ46 135 aa18.14■□□□□ 0.49
CMTM3-212ENST00000566121 FLOT1O75955 427 aa18.14■□□□□ 0.49
CMTM3-212ENST00000566121 ERCC3P19447 782 aa18.14■□□□□ 0.49
CMTM3-212ENST00000566121 MX1P20591 662 aa18.14■□□□□ 0.49
CMTM3-212ENST00000566121 ATP2B2Q01814 1243 aa18.14■□□□□ 0.49
CMTM3-212ENST00000566121 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.14■□□□□ 0.49
CMTM3-212ENST00000566121 IFNL3Q8IZI9 196 aa18.14■□□□□ 0.49
CMTM3-212ENST00000566121 NACAP1Q9BZK3 213 aa18.14■□□□□ 0.49
CMTM3-212ENST00000566121 C11orf49Q9H6J7 331 aa18.14■□□□□ 0.49
CMTM3-212ENST00000566121 MKNK2Q9HBH9 465 aa18.14■□□□□ 0.49
CMTM3-212ENST00000566121 PPP1R9AQ9ULJ8 1098 aa18.14■□□□□ 0.49
CMTM3-212ENST00000566121 DIS3Q9Y2L1 958 aaKnown RBP18.14■□□□□ 0.49
CMTM3-212ENST00000566121 LAMA3Q16787 3333 aa18.14■□□□□ 0.49
CMTM3-212ENST00000566121 DNAH12Q6ZR08 3092 aa18.14■□□□□ 0.49
CMTM3-212ENST00000566121 ATP2A1O14983 1001 aa18.13■□□□□ 0.49
CMTM3-212ENST00000566121 BMP8BP34820 402 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms