RNA–Protein interactions for RNA: ENST00000563425.2

CDH5-204, Transcript of cadherin 5, humanhuman

TSL 5 BASIC

Gene CDH5, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-204ENST00000563425 CSRNP2Q9H175 543 aa22.34■■□□□ 1.17
CDH5-204ENST00000563425 ZNF287Q9HBT7 754 aa22.34■■□□□ 1.17
CDH5-204ENST00000563425 PCDHA5Q9Y5H7 936 aa22.34■■□□□ 1.17
CDH5-204ENST00000563425 POLR2DO15514 142 aaKnown RBP22.33■■□□□ 1.17
CDH5-204ENST00000563425 RHBDL3P58872 404 aa22.33■■□□□ 1.17
CDH5-204ENST00000563425 TPM4P67936 248 aa22.33■■□□□ 1.17
CDH5-204ENST00000563425 ATP6V0A2Q9Y487 856 aa22.33■■□□□ 1.17
CDH5-204ENST00000563425 SNED1Q8TER0 1413 aa22.33■■□□□ 1.17
CDH5-204ENST00000563425 COL11A2P13942 1736 aaPredicted RBP22.33■■□□□ 1.16
CDH5-204ENST00000563425 GNAQP50148 359 aa22.33■■□□□ 1.16
CDH5-204ENST00000563425 C16orf86Q6ZW13 317 aa22.33■■□□□ 1.16
CDH5-204ENST00000563425 CACTINQ8WUQ7 758 aaKnown RBP22.33■■□□□ 1.16
CDH5-204ENST00000563425 FLT1P17948 1338 aa22.33■■□□□ 1.16
CDH5-204ENST00000563425 FOXN1O15353 648 aa22.32■■□□□ 1.16
CDH5-204ENST00000563425 VEGFAP15692 232 aaPredicted RBP22.32■■□□□ 1.16
CDH5-204ENST00000563425 NLRP5P59047 1200 aa22.32■■□□□ 1.16
CDH5-204ENST00000563425 ZNF827Q17R98 1081 aa22.32■■□□□ 1.16
CDH5-204ENST00000563425 NOM1Q5C9Z4 860 aaKnown RBP22.32■■□□□ 1.16
CDH5-204ENST00000563425 DNTTIP2Q5QJE6 756 aaKnown RBP22.32■■□□□ 1.16
CDH5-204ENST00000563425 NLGN1Q8N2Q7 840 aa22.32■■□□□ 1.16
CDH5-204ENST00000563425 FERMT2Q96AC1 680 aa22.32■■□□□ 1.16
CDH5-204ENST00000563425 ANO8Q9HCE9 1232 aaPredicted RBP22.32■■□□□ 1.16
CDH5-204ENST00000563425 SH3GLB2Q9NR46 395 aa22.32■■□□□ 1.16
CDH5-204ENST00000563425 SERTAD1Q9UHV2 236 aa22.32■■□□□ 1.16
CDH5-204ENST00000563425 MAD2L2Q9UI95 211 aa22.32■■□□□ 1.16
CDH5-204ENST00000563425 WNT7AO00755 349 aa22.31■■□□□ 1.16
CDH5-204ENST00000563425 POSTNQ15063 836 aa22.31■■□□□ 1.16
CDH5-204ENST00000563425 TTC38Q5R3I4 469 aa22.31■■□□□ 1.16
CDH5-204ENST00000563425 USP49Q70CQ1 688 aa22.31■■□□□ 1.16
CDH5-204ENST00000563425 STAG2Q8N3U4 1231 aa22.31■■□□□ 1.16
CDH5-204ENST00000563425 ACTN4O43707 911 aaKnown RBP22.31■■□□□ 1.16
CDH5-204ENST00000563425 TRAPPC10P48553 1259 aa22.31■■□□□ 1.16
CDH5-204ENST00000563425 CDK8P49336 464 aa22.31■■□□□ 1.16
CDH5-204ENST00000563425 NT5DC1Q5TFE4 455 aa22.31■■□□□ 1.16
CDH5-204ENST00000563425 KANK3Q6NY19 840 aa22.31■■□□□ 1.16
CDH5-204ENST00000563425 NEMFO60524 1076 aa22.3■■□□□ 1.16
CDH5-204ENST00000563425 SRGNP10124 158 aa22.3■■□□□ 1.16
CDH5-204ENST00000563425 CALML3P27482 149 aa22.3■■□□□ 1.16
CDH5-204ENST00000563425 OLFM4Q6UX06 510 aa22.3■■□□□ 1.16
CDH5-204ENST00000563425 AKT1S1Q96B36 256 aa22.3■■□□□ 1.16
CDH5-204ENST00000563425 TMEM47Q9BQJ4 181 aa22.3■■□□□ 1.16
CDH5-204ENST00000563425 COA1Q9GZY4 146 aa22.3■■□□□ 1.16
CDH5-204ENST00000563425 HSD3B7Q9H2F3 369 aa22.3■■□□□ 1.16
CDH5-204ENST00000563425 PLSCR1O15162 318 aa22.29■■□□□ 1.16
CDH5-204ENST00000563425 SARSP49591 514 aaKnown RBP22.29■■□□□ 1.16
CDH5-204ENST00000563425 ZNF174Q15697 407 aa22.29■■□□□ 1.16
CDH5-204ENST00000563425 COL23A1Q86Y22 540 aaPredicted RBP22.29■■□□□ 1.16
CDH5-204ENST00000563425 LRRC8AQ8IWT6 810 aa22.29■■□□□ 1.16
CDH5-204ENST00000563425 NPR1P16066 1061 aa22.29■■□□□ 1.16
CDH5-204ENST00000563425 GTF2IP78347 998 aa22.29■■□□□ 1.16
CDH5-204ENST00000563425 ATP2C1P98194 919 aaPredicted RBP22.29■■□□□ 1.16
CDH5-204ENST00000563425 MYL5Q02045 173 aa22.29■■□□□ 1.16
CDH5-204ENST00000563425 NEDD1Q8NHV4 660 aa22.29■■□□□ 1.16
CDH5-204ENST00000563425 EYA3Q99504 573 aa22.29■■□□□ 1.16
CDH5-204ENST00000563425 XPO4Q9C0E2 1151 aaKnown RBP22.29■■□□□ 1.16
CDH5-204ENST00000563425 IFNKQ9P0W0 207 aa22.29■■□□□ 1.16
CDH5-204ENST00000563425 MAN1B1Q9UKM7 699 aa22.29■■□□□ 1.16
CDH5-204ENST00000563425 PALM3A6NDB9 673 aaPredicted RBP22.28■■□□□ 1.16
CDH5-204ENST00000563425 PRR29P0C7W0 189 aa22.28■■□□□ 1.16
CDH5-204ENST00000563425 BMP6P22004 513 aa22.28■■□□□ 1.16
CDH5-204ENST00000563425 PIK3AP1Q6ZUJ8 805 aa22.28■■□□□ 1.16
CDH5-204ENST00000563425 PDILTQ8N807 584 aa22.28■■□□□ 1.16
CDH5-204ENST00000563425 IMPACTQ9P2X3 320 aa22.28■■□□□ 1.16
CDH5-204ENST00000563425 STX8Q9UNK0 236 aa22.28■■□□□ 1.16
CDH5-204ENST00000563425 SUGT1Q9Y2Z0 365 aa22.28■■□□□ 1.16
CDH5-204ENST00000563425 DAGLAQ9Y4D2 1042 aa22.28■■□□□ 1.16
CDH5-204ENST00000563425 PTGDRQ13258 359 aa22.27■■□□□ 1.16
CDH5-204ENST00000563425 SLC35G1Q2M3R5 365 aa22.27■■□□□ 1.16
CDH5-204ENST00000563425 BLIDQ8IZY5 108 aa22.27■■□□□ 1.16
CDH5-204ENST00000563425 RIMBP2O15034 1052 aa22.27■■□□□ 1.16
CDH5-204ENST00000563425 ADAMTS3O15072 1205 aa22.27■■□□□ 1.16
CDH5-204ENST00000563425 SMARCE1Q969G3 411 aa22.27■■□□□ 1.16
CDH5-204ENST00000563425 EPSTI1Q96J88 318 aa22.27■■□□□ 1.16
CDH5-204ENST00000563425 LZTS2Q9BRK4 669 aa22.27■■□□□ 1.16
CDH5-204ENST00000563425 OSBPL5Q9H0X9 879 aaPredicted RBP22.27■■□□□ 1.16
CDH5-204ENST00000563425 PCDHA4Q9UN74 947 aa22.27■■□□□ 1.16
CDH5-204ENST00000563425 A0A087X0B3 334 aa22.26■■□□□ 1.15
CDH5-204ENST00000563425 MYO1BO43795 1136 aa22.26■■□□□ 1.15
CDH5-204ENST00000563425 SMC2O95347 1197 aa22.26■■□□□ 1.15
CDH5-204ENST00000563425 LMOD1P29536 600 aaPredicted RBP22.26■■□□□ 1.15
CDH5-204ENST00000563425 ARID5BQ14865 1188 aa22.26■■□□□ 1.15
CDH5-204ENST00000563425 FILIP1Q7Z7B0 1213 aa22.26■■□□□ 1.15
CDH5-204ENST00000563425 TRIML1Q8N9V2 468 aa22.26■■□□□ 1.15
CDH5-204ENST00000563425 SPATA20Q8TB22 786 aa22.26■■□□□ 1.15
CDH5-204ENST00000563425 SYMPKQ92797 1274 aaKnown RBP22.26■■□□□ 1.15
CDH5-204ENST00000563425 GPKOWQ92917 476 aaPredicted RBP eCLIP22.26■■□□□ 1.15
CDH5-204ENST00000563425 CYTH3O43739 400 aa22.25■■□□□ 1.15
CDH5-204ENST00000563425 GSDMDP57764 484 aa22.25■■□□□ 1.15
CDH5-204ENST00000563425 FANCCQ00597 558 aa22.25■■□□□ 1.15
CDH5-204ENST00000563425 MORC3Q14149 939 aa22.25■■□□□ 1.15
CDH5-204ENST00000563425 GRAMD1CQ8IYS0 662 aa22.25■■□□□ 1.15
CDH5-204ENST00000563425 ZC3H12CQ9C0D7 883 aaKnown RBP22.25■■□□□ 1.15
CDH5-204ENST00000563425 ADAMTSL1Q8N6G6 1762 aa22.25■■□□□ 1.15
CDH5-204ENST00000563425 ALDH1B1P30837 517 aa22.25■■□□□ 1.15
CDH5-204ENST00000563425 FAM177A1Q8N128 213 aaPredicted RBP22.25■■□□□ 1.15
CDH5-204ENST00000563425 MLKLQ8NB16 471 aa22.25■■□□□ 1.15
CDH5-204ENST00000563425 CCDC34Q96HJ3 373 aa22.25■■□□□ 1.15
CDH5-204ENST00000563425 PRIMPOLQ96LW4 560 aa22.25■■□□□ 1.15
CDH5-204ENST00000563425 UQCRHLA0A096LP55 91 aa22.24■■□□□ 1.15
CDH5-204ENST00000563425 M0R2N6 131 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms