RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 TRIT1Q9H3H1 467 aaKnown RBP7.85□□□□□ -1.15
LINC00254-201ENST00000563416 INPP5FQ9Y2H2 1132 aa7.85□□□□□ -1.15
LINC00254-201ENST00000563416 OAS3Q9Y6K5 1087 aaKnown RBP7.85□□□□□ -1.15
LINC00254-201ENST00000563416 PRDM2Q13029 1718 aa7.85□□□□□ -1.15
LINC00254-201ENST00000563416 TOP2AP11388 1531 aaKnown RBP7.84□□□□□ -1.15
LINC00254-201ENST00000563416 H3BS24 57 aa7.84□□□□□ -1.15
LINC00254-201ENST00000563416 NME1P15531 152 aaKnown RBP7.84□□□□□ -1.15
LINC00254-201ENST00000563416 IRAK1P51617 712 aa7.84□□□□□ -1.15
LINC00254-201ENST00000563416 IKZF1Q13422 519 aa7.84□□□□□ -1.15
LINC00254-201ENST00000563416 PLCL1Q15111 1095 aa7.84□□□□□ -1.15
LINC00254-201ENST00000563416 ZNF574Q6ZN55 896 aaPredicted RBP7.84□□□□□ -1.15
LINC00254-201ENST00000563416 NFXL1Q6ZNB6 911 aa7.84□□□□□ -1.15
LINC00254-201ENST00000563416 SPRED2Q7Z698 418 aa7.84□□□□□ -1.15
LINC00254-201ENST00000563416 CRBNQ96SW2 442 aa7.84□□□□□ -1.15
LINC00254-201ENST00000563416 GINM1Q9NU53 330 aa7.84□□□□□ -1.15
LINC00254-201ENST00000563416 EFR3BQ9Y2G0 817 aa7.84□□□□□ -1.15
LINC00254-201ENST00000563416 ST14Q9Y5Y6 855 aa7.84□□□□□ -1.15
LINC00254-201ENST00000563416 TNFRSF10CO14798 259 aa7.83□□□□□ -1.16
LINC00254-201ENST00000563416 SOX9P48436 509 aa7.83□□□□□ -1.16
LINC00254-201ENST00000563416 ABI1Q8IZP0 508 aa7.83□□□□□ -1.16
LINC00254-201ENST00000563416 DTWD2Q8NBA8 298 aa7.83□□□□□ -1.16
LINC00254-201ENST00000563416 Q96M66 194 aa7.83□□□□□ -1.16
LINC00254-201ENST00000563416 TM9SF2Q99805 663 aa7.83□□□□□ -1.16
LINC00254-201ENST00000563416 ACBD3Q9H3P7 528 aa7.83□□□□□ -1.16
LINC00254-201ENST00000563416 PPT2Q9UMR5 302 aa7.83□□□□□ -1.16
LINC00254-201ENST00000563416 CLEC3AO75596 197 aa7.82□□□□□ -1.16
LINC00254-201ENST00000563416 UBOX5O94941 541 aa7.82□□□□□ -1.16
LINC00254-201ENST00000563416 FUT4P22083 530 aa7.82□□□□□ -1.16
LINC00254-201ENST00000563416 GNL2Q13823 731 aaKnown RBP7.82□□□□□ -1.16
LINC00254-201ENST00000563416 INTS3Q68E01 1043 aaKnown RBP7.82□□□□□ -1.16
LINC00254-201ENST00000563416 RBBP8NLQ8NC74 664 aaPredicted RBP7.82□□□□□ -1.16
LINC00254-201ENST00000563416 ASCC2Q9H1I8 757 aaPredicted RBP7.82□□□□□ -1.16
LINC00254-201ENST00000563416 ANTXR1Q9H6X2 564 aa7.82□□□□□ -1.16
LINC00254-201ENST00000563416 SEMA3GQ9NS98 782 aa7.82□□□□□ -1.16
LINC00254-201ENST00000563416 GPATCH2Q9NW75 528 aa7.82□□□□□ -1.16
LINC00254-201ENST00000563416 LAMC3Q9Y6N6 1575 aa7.82□□□□□ -1.16
LINC00254-201ENST00000563416 POLR2BP30876 1174 aaKnown RBP7.81□□□□□ -1.16
LINC00254-201ENST00000563416 CD96P40200 585 aa7.81□□□□□ -1.16
LINC00254-201ENST00000563416 VPS37DQ86XT2 251 aa7.81□□□□□ -1.16
LINC00254-201ENST00000563416 WFDC3Q8IUB2 231 aa7.81□□□□□ -1.16
LINC00254-201ENST00000563416 TAB3Q8N5C8 712 aaPredicted RBP7.81□□□□□ -1.16
LINC00254-201ENST00000563416 PI4K2BQ8TCG2 481 aa7.81□□□□□ -1.16
LINC00254-201ENST00000563416 UBE2FQ969M7 185 aa7.81□□□□□ -1.16
LINC00254-201ENST00000563416 SEC16BQ96JE7 1060 aa7.81□□□□□ -1.16
LINC00254-201ENST00000563416 GPR62Q9BZJ7 368 aa7.81□□□□□ -1.16
LINC00254-201ENST00000563416 LMCD1Q9NZU5 365 aa7.81□□□□□ -1.16
LINC00254-201ENST00000563416 ZSWIM5Q9P217 1185 aa7.81□□□□□ -1.16
LINC00254-201ENST00000563416 KIF21AQ7Z4S6 1674 aa7.8□□□□□ -1.16
LINC00254-201ENST00000563416 ZP2Q05996 745 aa7.8□□□□□ -1.16
LINC00254-201ENST00000563416 SLC23A3Q6PIS1 610 aa7.8□□□□□ -1.16
LINC00254-201ENST00000563416 TMPRSS7Q7RTY8 843 aa7.8□□□□□ -1.16
LINC00254-201ENST00000563416 DHRS1Q96LJ7 313 aa7.8□□□□□ -1.16
LINC00254-201ENST00000563416 CAPN10Q9HC96 672 aa7.8□□□□□ -1.16
LINC00254-201ENST00000563416 ATP13A1Q9HD20 1204 aa7.8□□□□□ -1.16
LINC00254-201ENST00000563416 NASPP49321 788 aaPredicted RBP7.79□□□□□ -1.16
LINC00254-201ENST00000563416 EIF6P56537 245 aaKnown RBP7.79□□□□□ -1.16
LINC00254-201ENST00000563416 OR6P1Q8NGX9 317 aa7.79□□□□□ -1.16
LINC00254-201ENST00000563416 CPLX3Q8WVH0 158 aa7.79□□□□□ -1.16
LINC00254-201ENST00000563416 VWCEQ96DN2 955 aa7.79□□□□□ -1.16
LINC00254-201ENST00000563416 SRRTQ9BXP5 876 aaKnown RBP7.79□□□□□ -1.16
LINC00254-201ENST00000563416 STRIP2Q9ULQ0 834 aa7.79□□□□□ -1.16
LINC00254-201ENST00000563416 COL17A1Q9UMD9 1497 aaPredicted RBP7.79□□□□□ -1.16
LINC00254-201ENST00000563416 LRRN2O75325 713 aa7.78□□□□□ -1.16
LINC00254-201ENST00000563416 GUCY2CP25092 1073 aa7.78□□□□□ -1.16
LINC00254-201ENST00000563416 TPP2P29144 1249 aaPredicted RBP7.78□□□□□ -1.16
LINC00254-201ENST00000563416 CLEC16AQ2KHT3 1053 aa7.78□□□□□ -1.16
LINC00254-201ENST00000563416 ZNF792Q3KQV3 632 aa7.78□□□□□ -1.16
LINC00254-201ENST00000563416 NBPF12Q5TAG4 269 aaPredicted RBP7.78□□□□□ -1.16
LINC00254-201ENST00000563416 CCDC81Q6ZN84 652 aa7.78□□□□□ -1.16
LINC00254-201ENST00000563416 LSRQ86X29 649 aaPredicted RBP7.78□□□□□ -1.16
LINC00254-201ENST00000563416 SLC6A18Q96N87 628 aa7.78□□□□□ -1.16
LINC00254-201ENST00000563416 SLC9A7Q96T83 725 aa7.78□□□□□ -1.16
LINC00254-201ENST00000563416 DUSP15Q9H1R2 295 aaPredicted RBP7.78□□□□□ -1.16
LINC00254-201ENST00000563416 ADGRE2Q9UHX3 823 aa7.78□□□□□ -1.16
LINC00254-201ENST00000563416 SLC12A7Q9Y666 1083 aa7.78□□□□□ -1.16
LINC00254-201ENST00000563416 SRFP11831 508 aa7.77□□□□□ -1.17
LINC00254-201ENST00000563416 CCDC120Q96HB5 630 aa7.77□□□□□ -1.17
LINC00254-201ENST00000563416 MKRN2Q9H000 416 aaKnown RBP7.77□□□□□ -1.17
LINC00254-201ENST00000563416 CARS2Q9HA77 564 aaKnown RBP7.77□□□□□ -1.17
LINC00254-201ENST00000563416 NESP48681 1621 aa7.77□□□□□ -1.17
LINC00254-201ENST00000563416 GIPRP48546 466 aa7.76□□□□□ -1.17
LINC00254-201ENST00000563416 CBLL1Q75N03 491 aa7.76□□□□□ -1.17
LINC00254-201ENST00000563416 NPM2Q86SE8 214 aaKnown RBP7.76□□□□□ -1.17
LINC00254-201ENST00000563416 TSPYL5Q86VY4 417 aaPredicted RBP7.76□□□□□ -1.17
LINC00254-201ENST00000563416 TMEM192Q8IY95 271 aa7.76□□□□□ -1.17
LINC00254-201ENST00000563416 ENOX1Q8TC92 643 aaKnown RBP7.76□□□□□ -1.17
LINC00254-201ENST00000563416 SMARCC1Q92922 1105 aaPredicted RBP7.76□□□□□ -1.17
LINC00254-201ENST00000563416 RC3H2Q9HBD1 1191 aaKnown RBP7.76□□□□□ -1.17
LINC00254-201ENST00000563416 SUCOQ9UBS9 1254 aaKnown RBP7.76□□□□□ -1.17
LINC00254-201ENST00000563416 DUSP13Q9UII6 198 aa7.76□□□□□ -1.17
LINC00254-201ENST00000563416 THOC2Q8NI27 1593 aaKnown RBP7.76□□□□□ -1.17
LINC00254-201ENST00000563416 FAM86C2PA6NEL3 165 aa7.75□□□□□ -1.17
LINC00254-201ENST00000563416 RNASE1P07998 156 aaKnown RBP7.75□□□□□ -1.17
LINC00254-201ENST00000563416 ACRP10323 421 aa7.75□□□□□ -1.17
LINC00254-201ENST00000563416 ATF4P18848 351 aaPredicted RBP7.75□□□□□ -1.17
LINC00254-201ENST00000563416 LTKP29376 864 aa7.75□□□□□ -1.17
LINC00254-201ENST00000563416 NMIQ13287 307 aaPredicted RBP7.75□□□□□ -1.17
LINC00254-201ENST00000563416 NBPF9Q3BBW0 867 aa7.75□□□□□ -1.17
LINC00254-201ENST00000563416 CREG2Q8IUH2 290 aa7.75□□□□□ -1.17
LINC00254-201ENST00000563416 SYTL4Q96C24 671 aaPredicted RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms