RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 PAWRQ96IZ0 340 aaKnown RBP18.77■□□□□ 0.6
USB1-208ENST00000563207 RPAP3Q9H6T3 665 aaPredicted RBP18.77■□□□□ 0.6
USB1-208ENST00000563207 CABP5Q9NP86 173 aa18.77■□□□□ 0.6
USB1-208ENST00000563207 RLFQ13129 1914 aa18.76■□□□□ 0.59
USB1-208ENST00000563207 MNX1P50219 401 aaPredicted RBP18.76■□□□□ 0.59
USB1-208ENST00000563207 MORN1Q5T089 497 aa18.76■□□□□ 0.59
USB1-208ENST00000563207 FSD1Q9BTV5 496 aa18.76■□□□□ 0.59
USB1-208ENST00000563207 CEP290O15078 2479 aa18.75■□□□□ 0.59
USB1-208ENST00000563207 TRIM6-TRIM34B2RNG4 842 aa18.75■□□□□ 0.59
USB1-208ENST00000563207 USP17L12C9JPN9 530 aa18.75■□□□□ 0.59
USB1-208ENST00000563207 USP17L21D6R901 530 aa18.75■□□□□ 0.59
USB1-208ENST00000563207 TTC22Q5TAA0 569 aa18.75■□□□□ 0.59
USB1-208ENST00000563207 CHRDL2Q6WN34 429 aa18.75■□□□□ 0.59
USB1-208ENST00000563207 NUDT12Q9BQG2 462 aa18.75■□□□□ 0.59
USB1-208ENST00000563207 RPTORQ8N122 1335 aa18.74■□□□□ 0.59
USB1-208ENST00000563207 SPDYE16A6NNV3 312 aaPredicted RBP18.74■□□□□ 0.59
USB1-208ENST00000563207 RNF113AO15541 343 aaKnown RBP18.74■□□□□ 0.59
USB1-208ENST00000563207 PRKAR2AP13861 404 aaKnown RBP18.74■□□□□ 0.59
USB1-208ENST00000563207 MAPK4P31152 587 aa18.74■□□□□ 0.59
USB1-208ENST00000563207 FXR1P51114 621 aaKnown RBP eCLIP18.74■□□□□ 0.59
USB1-208ENST00000563207 USP14P54578 494 aa18.74■□□□□ 0.59
USB1-208ENST00000563207 C12orf60Q5U649 245 aa18.74■□□□□ 0.59
USB1-208ENST00000563207 PLEKHH3Q7Z736 793 aa18.74■□□□□ 0.59
USB1-208ENST00000563207 HMX1Q9NP08 348 aaPredicted RBP18.74■□□□□ 0.59
USB1-208ENST00000563207 FLRT1Q9NZU1 646 aa18.74■□□□□ 0.59
USB1-208ENST00000563207 RABGAP1Q9Y3P9 1069 aa18.74■□□□□ 0.59
USB1-208ENST00000563207 SLC4A4Q9Y6R1 1079 aa18.74■□□□□ 0.59
USB1-208ENST00000563207 RANBP2P49792 3224 aaKnown RBP18.74■□□□□ 0.59
USB1-208ENST00000563207 CCND3P30281 292 aaPredicted RBP18.73■□□□□ 0.59
USB1-208ENST00000563207 CDK8P49336 464 aa18.73■□□□□ 0.59
USB1-208ENST00000563207 CACNB2Q08289 660 aaPredicted RBP18.73■□□□□ 0.59
USB1-208ENST00000563207 MAP3K21Q5TCX8 1036 aa18.73■□□□□ 0.59
USB1-208ENST00000563207 WDR78Q5VTH9 848 aa18.73■□□□□ 0.59
USB1-208ENST00000563207 CTR9Q6PD62 1173 aa18.73■□□□□ 0.59
USB1-208ENST00000563207 SPICE1Q8N0Z3 855 aa18.73■□□□□ 0.59
USB1-208ENST00000563207 STK11IPQ8N1F8 1099 aa18.73■□□□□ 0.59
USB1-208ENST00000563207 APPBP2Q92624 585 aa18.73■□□□□ 0.59
USB1-208ENST00000563207 RILPL2Q969X0 211 aa18.73■□□□□ 0.59
USB1-208ENST00000563207 ATP8A2Q9NTI2 1148 aa18.73■□□□□ 0.59
USB1-208ENST00000563207 HIP1O00291 1037 aa18.72■□□□□ 0.59
USB1-208ENST00000563207 CCAR1Q8IX12 1150 aaKnown RBP18.72■□□□□ 0.59
USB1-208ENST00000563207 RBM27Q9P2N5 1060 aaKnown RBP18.72■□□□□ 0.59
USB1-208ENST00000563207 XRCC5P13010 732 aaKnown RBP18.71■□□□□ 0.59
USB1-208ENST00000563207 TMEM179Q6ZVK1 233 aa18.71■□□□□ 0.59
USB1-208ENST00000563207 SOCS4Q8WXH5 440 aa18.71■□□□□ 0.59
USB1-208ENST00000563207 OSBP2Q969R2 916 aa18.71■□□□□ 0.59
USB1-208ENST00000563207 STRBPQ96SI9 672 aaKnown RBP18.71■□□□□ 0.59
USB1-208ENST00000563207 HTATIP2Q9BUP3 242 aa18.71■□□□□ 0.59
USB1-208ENST00000563207 PARP14Q460N5 1801 aa18.71■□□□□ 0.59
USB1-208ENST00000563207 A0A0G2JMZ2 1700 aa18.7■□□□□ 0.58
USB1-208ENST00000563207 ZKSCAN1P17029 563 aaPredicted RBP18.7■□□□□ 0.58
USB1-208ENST00000563207 MAP2K5Q13163 448 aa18.7■□□□□ 0.58
USB1-208ENST00000563207 SAMD1Q6SPF0 538 aaPredicted RBP18.7■□□□□ 0.58
USB1-208ENST00000563207 LBX2Q6XYB7 198 aa18.7■□□□□ 0.58
USB1-208ENST00000563207 DNAH12Q6ZR08 3092 aa18.7■□□□□ 0.58
USB1-208ENST00000563207 C16orf86Q6ZW13 317 aa18.7■□□□□ 0.58
USB1-208ENST00000563207 NPLOC4Q8TAT6 608 aa18.7■□□□□ 0.58
USB1-208ENST00000563207 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.7■□□□□ 0.58
USB1-208ENST00000563207 TANGO6Q9C0B7 1094 aa18.7■□□□□ 0.58
USB1-208ENST00000563207 SWAP70Q9UH65 585 aa18.7■□□□□ 0.58
USB1-208ENST00000563207 COL11A1P12107 1806 aaPredicted RBP18.7■□□□□ 0.58
USB1-208ENST00000563207 SZT2Q5T011 3432 aa18.7■□□□□ 0.58
USB1-208ENST00000563207 GSG1L2A8MUP6 293 aa18.69■□□□□ 0.58
USB1-208ENST00000563207 GSPT1P15170 499 aaKnown RBP18.69■□□□□ 0.58
USB1-208ENST00000563207 PTPREP23469 700 aa18.69■□□□□ 0.58
USB1-208ENST00000563207 RGS2P41220 211 aa18.69■□□□□ 0.58
USB1-208ENST00000563207 ZMYM1Q5SVZ6 1142 aa18.69■□□□□ 0.58
USB1-208ENST00000563207 GTF3C2Q8WUA4 911 aaPredicted RBP18.69■□□□□ 0.58
USB1-208ENST00000563207 SEC62Q99442 399 aaKnown RBP18.69■□□□□ 0.58
USB1-208ENST00000563207 MOV10L1Q9BXT6 1211 aaKnown RBP18.69■□□□□ 0.58
USB1-208ENST00000563207 FRMPD3Q5JV73 1810 aa18.68■□□□□ 0.58
USB1-208ENST00000563207 M0R2C6 588 aa18.68■□□□□ 0.58
USB1-208ENST00000563207 EVI5O60447 810 aa18.68■□□□□ 0.58
USB1-208ENST00000563207 EEF2P13639 858 aaKnown RBP18.68■□□□□ 0.58
USB1-208ENST00000563207 GNAT2P19087 354 aa18.68■□□□□ 0.58
USB1-208ENST00000563207 SDSP20132 328 aa18.68■□□□□ 0.58
USB1-208ENST00000563207 ICA1Q05084 483 aa18.68■□□□□ 0.58
USB1-208ENST00000563207 COG2Q14746 738 aa18.68■□□□□ 0.58
USB1-208ENST00000563207 LHX8Q68G74 356 aa18.68■□□□□ 0.58
USB1-208ENST00000563207 NECAB2Q7Z6G3 386 aa18.68■□□□□ 0.58
USB1-208ENST00000563207 ATG4CQ96DT6 458 aa18.68■□□□□ 0.58
USB1-208ENST00000563207 APBA2Q99767 749 aa18.68■□□□□ 0.58
USB1-208ENST00000563207 PRO3102Q9H379 93 aa18.68■□□□□ 0.58
USB1-208ENST00000563207 CWC22Q9HCG8 908 aaKnown RBP18.68■□□□□ 0.58
USB1-208ENST00000563207 EPB41L4AQ9HCS5 686 aaPredicted RBP18.68■□□□□ 0.58
USB1-208ENST00000563207 HELLSQ9NRZ9 838 aa18.68■□□□□ 0.58
USB1-208ENST00000563207 OGDHLQ9ULD0 1010 aa18.68■□□□□ 0.58
USB1-208ENST00000563207 TMX2Q9Y320 296 aa18.68■□□□□ 0.58
USB1-208ENST00000563207 ATP2B2Q01814 1243 aa18.67■□□□□ 0.58
USB1-208ENST00000563207 BMP2KLQ5H9B9 411 aa18.67■□□□□ 0.58
USB1-208ENST00000563207 VCPKMTQ9H867 229 aa18.67■□□□□ 0.58
USB1-208ENST00000563207 FBXO28Q9NVF7 368 aa18.67■□□□□ 0.58
USB1-208ENST00000563207 PFASO15067 1338 aa18.67■□□□□ 0.58
USB1-208ENST00000563207 GREB1LQ9C091 1923 aaPredicted RBP18.66■□□□□ 0.58
USB1-208ENST00000563207 TRIOBPQ9H2D6 2365 aa18.66■□□□□ 0.58
USB1-208ENST00000563207 SLC15A5A6NIM6 579 aa18.66■□□□□ 0.58
USB1-208ENST00000563207 CYP2C19P33261 490 aa18.66■□□□□ 0.58
USB1-208ENST00000563207 CCNA1P78396 465 aa18.66■□□□□ 0.58
USB1-208ENST00000563207 GRB14Q14449 540 aa18.66■□□□□ 0.58
USB1-208ENST00000563207 C7orf61Q8IZ16 206 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms